Query= MSMg01no526_c21.b1 MSMg01no526_c21.b1 CHROMAT_FILE:
MSMg01no526_c21.b1 PHD_FILE: MSMg01no526_c21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:01 2005
(512 letters)
>mm_chr11_76880630_76881542
Length = 913
Score = 853 bits (441), Expect = 0.0
Identities = 450/453 (99%), Gaps = 1/453 (0%)
Strand = Plus / Minus
Query: 5 gaattcgtttgc-ttttcaaatttactaatttttatttcatatgcattgatattgtccct 63
|||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 gaattcgtttgctttttaaaatttactaatttttatttcatatgcattgatattgtccct 394
Query: 64 gcatgaatgtctgtgtgagggtgtagtatccctctggaactggctggatcacatagaatt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 gcatgaatgtctgtgtgagggtgtagtatccctctggaactggctggatcacatagaatt 334
Query: 124 gtgacagtgcttgtgactactttctctctagttccatggtttgtaaaatgtgtaattatt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 gtgacagtgcttgtgactactttctctctagttccatggtttgtaaaatgtgtaattatt 274
Query: 184 attaacatttgtgtgtgtgttgctggtgacttgacccagagccacgcatcactgagctgt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 attaacatttgtgtgtgtgttgctggtgacttgacccagagccacgcatcactgagctgt 214
Query: 244 gtctcttaactgtttgtgtagtaacttttctgaaccagttctgcaatgtttatgatcttt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 213 gtctcttaactgtttgtgtagtaacttttctgaaccagttctgcaatgtttatgaccttt 154
Query: 304 gtgttgctgctgaagtctgttaacttagatgacagccactgatttatcctaccaaaacat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 gtgttgctgctgaagtctgttaacttagatgacagccactgatttatcctaccaaaacat 94
Query: 364 tggaactagttaagtgtcccattcttgtgacagtggattaattcatgttatatcaggcct 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 tggaactagttaagtgtcccattcttgtgacagtggattaattcatgttatatcaggcct 34
Query: 424 gtagtttacagttctgctatagcttttactctt 456
|||||||||||||||||||||||||||||||||
Sbjct: 33 gtagtttacagttctgctatagcttttactctt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 512
Length of database: 913
Length adjustment: 10
Effective length of query: 502
Effective length of database: 903
Effective search space: 453306
Effective search space used: 453306
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no526_c21.g1 MSMg01no526_c21.g1 CHROMAT_FILE:
MSMg01no526_c21.g1 PHD_FILE: MSMg01no526_c21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:01 2005
(624 letters)
>mm_chr11_76701673_76702696
Length = 1024
Score = 1141 bits (590), Expect = 0.0
Identities = 617/626 (98%), Gaps = 2/626 (0%)
Strand = Plus / Plus
Query: 1 caggtgctgctagacatgactttataaggggtaaggaagttgaacttggctaccaggcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caggtgctgctagacatgactttataaggggtaaggaagttgaacttggctaccaggcta 260
Query: 61 tgtgaccttctctggtggctcaaaggtggaggcatggatgtatgtttgcaggacatgcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtgaccttctctggtggctcaaaggtggaggcatggatgtatgtttgcaggacatgcag 320
Query: 121 acgatcctacccctgctgatcttaggacaagattaatgggatttggacaggccttgatcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 321 acgatcctacccctgctgatcttaggacaagattaatgggatttggacaggccttaatcc 380
Query: 181 tactcttgctccaggtctgcttcccacagctccatagctcccctggccccacaaatggat 240
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 381 tactcttgctccaggtctgcttcctacagctccatagctcccctggccccacaaatggat 440
Query: 241 aagtgcatacaaatatatttgatagtgaaagtgtaaaatccaacatgaagctgcacacct 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 441 aagtgcatacaaatatatttgatagtgaaagtgtaaaatccaacatgaagctgcacactt 500
Query: 301 gacgtcctggttcacttggccagcttgacacagcctagagtccagaaagtctcaactgag 360
|||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 501 gacgtcctggttcacttggccagcttgacaaagcctagagcccagaaagtctcaactgag 560
Query: 361 gaattgtctagatcagacagacctgtgggcatatttgtagggcttgtcttaattacttat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gaattgtctagatcagacagacctgtgggcatatttgtagggcttgtcttaattacttat 620
Query: 421 t-atgcaggagggtctagcccactgtgggcagcaccacccctagaaagctagttaagcat 479
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgatgcaggagggtctagcccactgtgggcagcaccacccctagaaagctagttaagcat 680
Query: 480 gagtctatgagaactagccagtaagcagtacccgtctattgtttctgcttcaggttcctg 539
|||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 681 gagtctatgagaactagccagtaagcagtagctgtctattgtttctgcttcaggttcctg 740
Query: 540 ccctgctgtccctcagtgatggattgtgagccaggagagaaagccaaataaatctttccc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ccctgctgtccctcagtgatggattgtgagccaggagagaaagccaaataaatctttccc 800
Query: 600 tccccaaagtggt-attttagcccag 624
||||||||||||| ||||||||||||
Sbjct: 801 tccccaaagtggttattttagcccag 826
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1024
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1014
Effective search space: 622596
Effective search space used: 622596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
