GAAGTGCGTTTTTTTTGTTATTGCGAGCCATGTAAAAATGAGAATAATAA
GACACCTCCTTCCTCCCTGTTTGATTGCGTCCATATTGCTATTTTTTTCT
TCCTCTTTATACTCAATCTTCTCTAATACATGTATAATATAATATAAGGA
CGAGCAAACATTCTACGGCATAAAATAGAAACGAGAAAGAGGATTAATAA
AAACAGTGGCGGCCTGGCTCCCCATGTAGTTCTTTTTATTTTTCCCACGG
CCTGTTCGAGGTAAGTATTGAGGTGTTTATAGCGGCTCTCACCGTGTGAC
TCCCTATACGAAAGTTTAAGTCTTAATTTAATTACCTCGCTAGACGGAGA
TGTTCTTTGTATATACTCCGCTAGGTGGGTAGTGGCGGAATTATGTATTT
ATGCGAGGAAATTTTTAAAAACGGTTCGGTGGCATTATATATAGAGGGCC
GTCTGCTTGCGCAGGCGTGACGACTCTTTTATTTTAAGCGATAATAAATA
TTCATATTTATTAGTATTTATTTTACACTACCTACGCAAGAAACAAGCGT
ATCCTCTCCCGTATGAAGAGGGCCGCGATTATATGTTTGATATTATATAC
GTGACAGTATAGTTAATGAGTGGTGGGATGTTCGTTTGAGCTCCGCTAGC
AAATGGCAGCTTATTGTTTCGTTTACTCACGTACCACCTTTATATATCTC
GGGATGCGGTACCTTACAAGAATATATATTGCCTAACATTTATATGCCCG
CCGTTACCCTATATTCTCTTTTTTATTAAAGCAGGCCACTACTTTTATTG
ACTTACTGTATCGTTTTTTCTTCAGCGATTAAGTAGATTCTGTGTGGCGT
CCTTTCATTTATATTAAACCACCCCTTCTTTTTTTNNNTNNNNNNNTAGA
GTCTAGTTTAGTTTTAGAGCGCNCCTTCATTTTTTNCTCCTCTTACGTAG
TATGTGGCGGGTCTTTCGTTCGGGTAGTGTGTGGGTGTTTCN

AAAANNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAATAGGGCAGAATCTT
GGAATCAGGGGTAAATGCAGAGGCCATGGAGGATTACTGCTTGCTGGCTT
GTTCTCATGGTTCACTCAGAGTTTTTTCTCATAGAACCCAGGACCACCAA
GCCAGAAATGGCACCATGCACCATAGATGGTATAGACCCTATACCATCAA
TCATTAATTAATAAAAATGTTCCCGAGGCTTGTGTAAAGCTTGCTATTAT
GGGGACATTTTCCTTCATTGAAGATTCCTCCTCTCACATGACTTTAGTTA
GTGTCAAGTTAACATAAAACTATCCAGTACATTGCTTATACCAAAATCTT
AGGAAAAACAAGAAGAAGCCATAATCCAAACAGTTAGGTGGCAAGAAATA
ATTAATGAGTATCAAGACAGTAATCAATGAAATAGAGACTAAAAGAACAA
CACATAAAATAATCAAAAGGGAATGCATATCTTTGAAAGAAACAAACAAG
GTTGAACTACCCAATACAAATTAACCAAAAGAAACAGAAAACCAAAGTTA
ATAAAATTATAGTTAAAAAGGCAACAATGGAATGTAGAAGATAATTTGGG
AACGATTTGAAACCAGATTCTGTAACCTACCAACATTATCTCAGAGAAAT
GCAAACAACACCACACAGATCCATAACAAGCAAAAGATGGAAAT

Query= MSMg01no527_b01.g1 MSMg01no527_b01.g1 CHROMAT_FILE:
MSMg01no527_b01.g1 PHD_FILE: MSMg01no527_b01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:11 2005
         (657 letters)



>mm_chr11_12892192_12893248
          Length = 1057

 Score = 1145 bits (592), Expect = 0.0
 Identities = 641/658 (97%), Gaps = 6/658 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaatagggcagaatcttggaatcaggggtaaatgcagaggccatggaggattactgcttg 60
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 205 aaatagggcagaatcttggaatcaggagtaaatgcagaggccatggaggattactgcttg 264

                                                                       
Query: 61  ctggcttgttctcatggttcactcagag-ttttttctcatagaacccaggaccaccaagc 119
           |||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||||||
Sbjct: 265 ctggcttgctctcatggttcactcagagtttttttctcatagaa-ccaggaccaccaagc 323

                                                                       
Query: 120 cagaaatggcaccatgcaccatagatggtatagaccctataccatcaatcattaattaat 179
           |||| |||||||||||||| || ||  | |||||||||||||||||||||||||||||||
Sbjct: 324 cagagatggcaccatgcacaat-ga--g-atagaccctataccatcaatcattaattaat 379

                                                                       
Query: 180 aaaaatgttcccgaggcttgtgtaaagcttgctattatggggacattttccttcattgaa 239
           ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aaaaatgctccccaggcttgtgtaaagcttgctattatggggacattttccttcattgaa 439

                                                                       
Query: 240 gattcctcctctcacatgactttagttagtgtcaagttaacataaaactatccagtacat 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gattcctcctctcacatgactttagttagtgtcaagttaacataaaactatccagtacat 499

                                                                       
Query: 300 tgcttataccaaaatcttaggaaaaacaagaagaagccataatccaaacagttaggtggc 359
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 500 tgcttataccaaaatcttaggaaaaacaagaagaagccataatccaagcagttaggtggc 559

                                                                       
Query: 360 aagaaataattaatgagtatcaagacagtaatcaatgaaatagagactaaaagaacaaca 419
           ||||||||||||||||  |||||| ||||||||| |||||||||||||||||||||||||
Sbjct: 560 aagaaataattaatgaccatcaaggcagtaatcagtgaaatagagactaaaagaacaaca 619

                                                                       
Query: 420 cataaaataatcaaaagggaatgcatatctttgaaagaaacaaacaaggttgaactaccc 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 cataaaataatcaaaagggaatgcatatctttgaaagaaacaaacaaggttgaactaccc 679

                                                                       
Query: 480 aatacaaattaaccaaaagaaacagaaaaccaaagttaataaaattatagttaaaaaggc 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 aatacaaattaaccaaaagaaacagaaaaccaaagttaataaaattatagttaaaaaggc 739

                                                                       
Query: 540 aacaatggaatgtagaagataatttgggaacgatttgaaaccagattctgtaacctacca 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 aacaatggaatgtagaagataatttgggaacgatttgaaaccagattctgtaacctacca 799

                                                                     
Query: 600 acattatctcagagaaatgcaaacaacaccacacagatccataacaagcaaaagatgg 657
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 acattatctcagagaaatgcaaacaacaccacacagatccataacaagcaaaagatgg 857


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1057
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1047
Effective search space:   677409
Effective search space used:   677409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)