Query= MSMg01no530_h04.b1 MSMg01no530_h04.b1 CHROMAT_FILE:
MSMg01no530_h04.b1 PHD_FILE: MSMg01no530_h04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:06:46 2005
(650 letters)
>mm_chr11_88805488_88806537
Length = 1050
Score = 1087 bits (562), Expect = 0.0
Identities = 622/648 (95%), Gaps = 13/648 (2%)
Strand = Plus / Plus
Query: 4 ggaattctttatggctttccaagaaggatttcaggagaaccatcatgtcggaagccaccg 63
||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctttatggcaatcaaagaaggatttcaggagaaccatcatgtcggaagccaccg 263
Query: 64 tgtccaggtcctttgcgtaggcatctgttgtgttgacgtagctgaagcccgtgcccacgg 123
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 264 tgtccaggtcctttgcgtaggcatctgttgtgttgacatagctgaagcccgtgcccacgg 323
Query: 124 gattatccacaaacaggagactggcccactgcagctgcagccacccagaaggagcaagca 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gattatccacaaacaggagactggcccactgcagctgcagccacccagaaggagcaagca 383
Query: 184 gggcaattggtggttagtcatcagttatcttcctggcaactttgcaaaaccacctttatg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gggcaattggtggttagtcatcagttatcttcctggcaactttgcaaaaccacctttatg 443
Query: 244 ataacatcagcgtggtgactttatcttattgctcaaagtgatttgggggcagctggggaa 303
||||||||||||||||||||||||||||||| |||||||||||||||||||||| || ||
Sbjct: 444 ataacatcagcgtggtgactttatcttattgttcaaagtgatttgggggcagctaggaaa 503
Query: 304 atggcccagttaggaaattgcttgccttatgagcatgaggccctgagttccatgacgaga 363
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 504 atggcccagttaggaaattgcttgccttatgagcatgaggccctgagttccatgactaga 563
Query: 364 atccatgaaaaaaagttggacaagcctggtggcagggcacgccttgaatcccagcactgg 423
||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 564 atccatgtaaaaaagttggacaagcctggtggcagggcacgccttaaatcccagcactgg 623
Query: 424 ggaggcagaggcaggtggatctcttgagtttgaggccagcctggtctacagagtgagttc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ggaggcagaggcaggtggatctcttgagtttgaggccagcctggtctacagagtgagttc 683
Query: 484 caggatagccaggactacacagagaaatggtctcaaggaaaaaaaaaaataaaaaaaaat 543
||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 684 caggatagccaggactacacagagaaatggtctcaaggaaaaaaaaaaa-aaaca----- 737
Query: 544 atatgccaggcatggtagcaaatacacacctgtaaccccagtgctgacgaggaggagaca 603
||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 -----ccaggcaaggtagcaaatacacacctgtaaccccagtgctgacgaggaggagaca 792
Query: 604 gata-ccctgtgtctcactcagcagtgtagtctaaatgatgagtttta 650
|||| ||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 793 gatatcccgg-gtctcactcagcagtgtagtctaaatgatgagtttta 839
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 650
Length of database: 1050
Length adjustment: 10
Effective length of query: 640
Effective length of database: 1040
Effective search space: 665600
Effective search space used: 665600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no530_h04.g1 MSMg01no530_h04.g1 CHROMAT_FILE:
MSMg01no530_h04.g1 PHD_FILE: MSMg01no530_h04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:06:46 2005
(637 letters)
>mm_chr11_88967544_88968577
Length = 1034
Score = 516 bits (267), Expect = e-150
Identities = 302/315 (95%), Gaps = 5/315 (1%)
Strand = Plus / Minus
Query: 1 aaccccagatcctgagatgtctctctctgaacccttcccactgtatttattatatgaggc 60
|||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 338 aaccccagatcctgagatgtttctctc-gaacccttcccactgtatttattatatgaggc 280
Query: 61 caggcaggcagcaggctccggagaagatgcttcacaaagtagcgtggctaggtgcaatca 120
|||||||||||||||||||||| ||||||||||| || ||||||||||||| ||||||||
Sbjct: 279 caggcaggcagcaggctccggaaaagatgcttcataaggtagcgtggctagatgcaatca 220
Query: 121 gcaaagagagacagaaggtcccacacgctcctgagccaggcaacctgggttacaagtctc 180
|| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 219 gc--agagagacagaaggtcccacacgctcctgagccagacagcctgggttacaagtctc 162
Query: 181 acctctgacacagactagatggatggccttgggcaagtggcttaactcctgcatctctcg 240
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 acctctg--acagactagatggatggccttgggcaagtggcttaactcctgcatctctcg 104
Query: 241 gttctcggaagatcaaaatcaaataacggtagtgcccaccattgtaaagtttggtgatta 300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 gttctcggaggatcaaaatcaaataacggtagtgcccaccattgtaaagtttggtgatta 44
Query: 301 agacacacaaagctc 315
|||||||||||||||
Sbjct: 43 agacacacaaagctc 29
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1034
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1024
Effective search space: 642048
Effective search space used: 642048
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
