Query= MSMg01no531_p06.b1 MSMg01no531_p06.b1 CHROMAT_FILE:
MSMg01no531_p06.b1 PHD_FILE: MSMg01no531_p06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:08:45 2005
(619 letters)
>mm_chr11_120714104_120715117
Length = 1014
Score = 890 bits (460), Expect = 0.0
Identities = 520/556 (93%), Gaps = 30/556 (5%)
Strand = Plus / Minus
Query: 69 ggggtacaggaggacagaaagaattttaggaagtaaaactgattactgagagggtcactg 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1014 ggggtacaggaggacagaaagaattttaggaagtaaaactgattactgagagggtcactg 955
Query: 129 caaagcttggggctagaccacagctcagtggtggagccctagcatcatatccaggaagtt 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 954 caaagcttggggctagaccacagctcagtggtggagccctagcatcatatccaggaagtt 895
Query: 189 cccaattcat----tcccccccacacacacacacaccaccaccaccaccaccaccaccgc 244
|||||||||| ||||||| |||||||||||| ||||||||||||||||||| ||||
Sbjct: 894 cccaattcatccccccccccccccacacacacaca-caccaccaccaccaccaccgccgc 836
Query: 245 gcgagtgcacacacacacacacacacacacacacacacaagccacagctaacacttgccc 304
||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 835 gcgagtg------------------cacacacacacacaagccacagctaacacttgccc 794
Query: 305 ctgatagtggtgcccattgacaatcccagcaccctggagtctggggtaggcaaga-tact 363
|||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||||
Sbjct: 793 ctgatagtggtgcccattgacaatcccagcaccctggagtctggggcaggcaa-attact 735
Query: 364 gttcagggaaagaaaaagaaaaaaaaaaaaaaggctttagaaatacttcctgcatgagag 423
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 734 gttcagggaaagaaaaag-----aaaaaaaaaggctttagaaatacttcctgcatgagag 680
Query: 424 tatgaagtctgatcagggtgagtggttttctccagtgaagagacctttagtgtaatccta 483
|||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||
Sbjct: 679 tatgaagtctgatcagggtgagtggttttctccagtgaagaggcctttagtgtaacccta 620
Query: 484 actgaaatatggacagactttctcttgaagccaaacaagtggattttcaagttccacagc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 actgaaatatggacagactttctcttgaagccaaacaagtggattttcaagttccacagc 560
Query: 544 aatgaaatgcctgggaggagacatcagcctgctgcagccttccacacattaagcattgag 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 aatgaaatgcctgggaggagacatcagcctgctgcagccttccacacattaagcattgag 500
Query: 604 acacatgatgcaaggc 619
||||||||||||||||
Sbjct: 499 acacatgatgcaaggc 484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 61
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 619
Length of database: 1014
Length adjustment: 10
Effective length of query: 609
Effective length of database: 1004
Effective search space: 611436
Effective search space used: 611436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no531_p06.g1 MSMg01no531_p06.g1 CHROMAT_FILE:
MSMg01no531_p06.g1 PHD_FILE: MSMg01no531_p06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:08:45 2005
(371 letters)
>mm_chr11_120577467_120578237
Length = 771
Score = 694 bits (359), Expect = 0.0
Identities = 368/371 (99%)
Strand = Plus / Plus
Query: 1 actttcacttctgcctatgaatttcaagtccttataaatgatatcttggcctcaggctca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actttcacttctgcctatgaatttcaagtccttataaatgatatcttggcctcaggctca 260
Query: 61 gaaatttatcacatggtgtcaccctctaaagcctgggctttcaggactggggtcctggat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaaatttatcacatggtgtcaccctctaaagcctgggctttcaggactggggtcctggat 320
Query: 121 accagcctttttcgtacttcctgctggagagtcactgcctccttactggctgttcctgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 accagcctttttcgtacttcctgctggagagtcactgcctccttactggctgttcctgaa 380
Query: 181 tcttctctcatcttcaatgtcttgttcccagccctgtgtctttgtggactcagtccttat 240
|||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcttctgtcatctccaatgtcttgttcccagccctgtgtctttgtggactcagtccttat 440
Query: 241 aattgttttatattcgagcttcttttgtgtgtgtgtgaaagatagccttgctaggtagcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 441 aattgttttatattcgagcttcttttgtgtgtgtgtgaaagatagccttgctatgtagcc 500
Query: 301 caggttggctttgaccacataatccccctgcctcaggagcctatgggacccagaggtgtc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caggttggctttgaccacataatccccctgcctcaggagcctatgggacccagaggtgtc 560
Query: 361 cgtcttttcag 371
|||||||||||
Sbjct: 561 cgtcttttcag 571
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 371
Length of database: 771
Length adjustment: 9
Effective length of query: 362
Effective length of database: 762
Effective search space: 275844
Effective search space used: 275844
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
