Query= MSMg01no532_a22.b1 MSMg01no532_a22.b1 CHROMAT_FILE:
MSMg01no532_a22.b1 PHD_FILE: MSMg01no532_a22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:08:53 2005
(629 letters)
>mm_chr11_70195949_70196977
Length = 1029
Score = 1168 bits (604), Expect = 0.0
Identities = 617/626 (98%), Gaps = 8/626 (1%)
Strand = Plus / Plus
Query: 4 ggaattcactctgtagaccaggctggcctcaaactcagaaatctgcctgcctctgcctcc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcactctgtagaccaggctggcctcaaactcagaaatctgcctgcctctgcctcc 263
Query: 64 cgagtgctgggattaaaggcatgcgccaccattgcctggcaatggggcagttttaaatcc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cgagtgctgggattaaaggcatgcgccaccattgcctggcaatggggcagttttaaatcc 323
Query: 124 tgctttataactgattcagttttctactgaaccgccaatcagtgacacaggagatgtcct 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tgctttataactgattcagttttctactgaaccgccaatcagtgacacaggagatgtcct 383
Query: 184 tttccttcagtctgcaatccagactggctctgctgctcacgtcttcatggatctgcttcg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tttccttcagtctgcaatccagactggctctgctgctcacgtcttcatggatctgcttcg 443
Query: 244 atcatacaacaaaacatgaatgcactgtgctccactgtgtggtcttcactgtgcagcctg 303
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 444 atcatacaacaaaacatgaacgcactgtgctccactgtgtggtcttcactgtgcagcctg 503
Query: 304 atctgtaagacacaagcaatgaagctgggctttgccttcatcggtcttcaggcaattatg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 atctgtaagacacaagcaatgaagctgggctttgccttcatcggtcttcaggcaattatg 563
Query: 364 tggcttaaatcagtgggagcatgacagtctgccaaattctacaacctgaacttaatcttt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tggcttaaatcagtgggagcatgacagtctgccaaattctacaacctgaacttaatcttt 623
Query: 424 atcagacacatgtgctattgtttggcaggcacctttttagttagaatatataaatctgaa 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 atcagacacatgtgctattgtttggcaggcacctttttagttagaatatataaatctgaa 683
Query: 484 ttatgtgctaaacacactctcctttccttccttcctcccttccttcttccctccccctta 543
|||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 684 ttatgtgctaaacacactctcctttccttccttcct--------tcttccctccccctta 735
Query: 544 gactttgaaagatctacctgcctctgcctcctggatgctgggattaaaagcatgctacca 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 gactttgaaagatctacctgcctctgcctcctggatgctgggattaaaagcatgctacca 795
Query: 604 tgcctgctcctccaggttttttgaga 629
||||||||||||||||||||||||||
Sbjct: 796 tgcctgctcctccaggttttttgaga 821
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1029
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1019
Effective search space: 630761
Effective search space used: 630761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no532_a22.g1 MSMg01no532_a22.g1 CHROMAT_FILE:
MSMg01no532_a22.g1 PHD_FILE: MSMg01no532_a22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:08:53 2005
(610 letters)
>mm_chr11_70343562_70344571
Length = 1010
Score = 658 bits (340), Expect = 0.0
Identities = 354/360 (98%), Gaps = 3/360 (0%)
Strand = Plus / Minus
Query: 1 cttcttgtactgagtgactttctggtagagacaggagataacaattaaaaaagcaagcag 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 cttcttgtattgagtgactttctggtagagacaggagataacaattaaaaaagcaagcag 301
Query: 61 gctaacaggaaatagcaattagaatggaaatcaaacaaggcactgtgagaatgaatcagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 gctaacaggaaatagcaattagaatggaaatcaaacaaggcactgtgagaatgaatcagg 241
Query: 121 agttttcctttaatttgaaatgattagaaaaggctttcctgggctggcgagatggttcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 240 agttttcctttaatttgaaatgattagaaaaggctttcctgggctggcgagatggctcag 181
Query: 181 cgggtaagagcactgactgctattccaaaggtcctgagttcaaatcccagcaaccacatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 cgggtaagagcactgactgctattccaaaggtcctgagttcaaatcccagcaaccacatg 121
Query: 241 gtggctcacaaccatccgtaatgagatctgacgccctcttctggtgtctgaagacagcta 300
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 120 gtggctcacaaccatccgtagtgagatctgacgccctcttctggtgtctgaagacagcta 61
Query: 301 cagtgtacttatgtataataataaataaatcttaaaaaaaaaaa---gaagaaaaaaaag 357
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 60 cagtgtacttatgtataataataaataaatcttaaaaaaaaaaaaaagaagaaaaaaaag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 610
Length of database: 1010
Length adjustment: 10
Effective length of query: 600
Effective length of database: 1000
Effective search space: 600000
Effective search space used: 600000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
