NAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCATCTGGATCTGGGCTTTGTTTTTTAAATTTTAATTTAGAGAT
TTTTTCACTACTTTAATCTCTTTACTTGTTATAGCCATGCTTAAATTATT
TTTAACTTGATTAGATTTAAATGAGTCAGATGTATCTAGAAATTCAGCCA
TTTTTCTTAGGTTTTCCAACTTAGTTGACTTTTATATTTTTCTTTAACCT
TATTTTATGTAGAAGTCTGTTTTATCTGCATGTTGAAGTCAGAAAAGGGC
AGCAGATTGCCTGGAACTGGCATTATAGATGATTAGTTAGAAATAAACCT
GGGCCCTCCAGAAGAGCAGCCCATATTCTTAACCTTTGAACCATCTCTCC
AGCCCATTAAATATTGTTTTTAAAGTAGTCTCTTATAGTTTTCTGAAATT
CTTTTGTACCTATTGTTCTATTGTAAAGTGTTCCTTTTCAACTCTTTAGT
TTTATTAGTTTGGCTTGTTTCATTTTTAATTAATTCAGTCTAGGGGTTGT
CGATCTTGTTTATCTTTTTAAAGGAACAACTTTTGATTCTTTGACTAGTT
TTTCATTTCACTTTTGTTTTCACTAGTGTCTGAATTAGCAGTGATTATTT
TTTCCAGCATTTATGTTTCATTTGTGTTTTTCAAACCTTTAAAGTACATC
ATTAGGTTGGTTATTTGTACTGTTTCTGTTCAAATTTGAAAGAGACTCAG
TGCCTC

TCNCTCGATTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCATAGATGCTATCTATGTT
TAATTGAGAAAAAAAAAAGATTTCCCATCTCATGCACTGTTTTCAGACTA
ACTTCTTAAATAAGCATCAACTATTGTTAATTCAACATTATGTATTTTGA
TATTTCCATCTCTCCACATATGTAGTCTGGTGTGTATATGCCACATAGAT
GTTTTGCTTGAAAGATAAAAAGAAAACAACATACTATTTCATAAGCATTC
TTACTCAAGAGCCAAATAAAATGGGGGATTAAAAAGCTGGAAAATGTGTT
TGCAATGGAATGATGGATCAAACATAGCAGATTTGCATATACAGAATTCA
TGAAACCAGTATAAAGAGAAACACATCACAAACAGAGGAAAGGGGGGGGG
GTTAATTCCCAATACAAAGTAAAATATGGCCAATAAAAATATGTGTATGT
ACACACACAAATTTATATAATAATCAACCTTTACTTTCAAGTAGATAGAA
AGGCTTAAGATAATATTTTCAACTGGGTCCCTTACCCAAATGACATATGT
TTGGTGATGACGGCATCCATTAAACAGGCTATAAGTTAAAGACTCTCCCC
AATAATTATTCAAAGATCTGATAATCTTGAATACTAATGATCTCATCCCC
TTCCCTTAAACCCTTAAATAAATGCTTCCTCATCTCATATTAATATAAAA
AN

Query= MSMg01no532_f07.g1 MSMg01no532_f07.g1 CHROMAT_FILE:
MSMg01no532_f07.g1 PHD_FILE: MSMg01no532_f07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:14 2005
         (457 letters)



>mm_chr11_92364088_92364942
          Length = 855

 Score =  837 bits (433), Expect = 0.0
 Identities = 451/457 (98%), Gaps = 2/457 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   catagatgctatctatgtttaattgagaaaaaaaaaagatttcccatctcatgcactgtt 60
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| 
Sbjct: 201 catagatgctatctatgtttaattgagaaaaaaaaa-gatttcccatctcatgcactgtg 259

                                                                       
Query: 61  ttcagactaacttcttaaataagcatcaactattgttaattcaacattatgtattttgat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ttcagactaacttcttaaataagcatcaactattgttaattcaacattatgtattttgat 319

                                                                       
Query: 121 atttccatctctccacatatgtagtctggtgtgtatatgccacatagatgttttgcttga 180
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 320 atttccatctctccacatatgtagtgtggtgtgtatatgccacatagatgttttgcttga 379

                                                                       
Query: 181 aagataaaaagaaaacaacatactatttcataagcattcttactcaagagccaaataaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aagataaaaagaaaacaacatactatttcataagcattcttactcaagagccaaataaaa 439

                                                                       
Query: 241 tgggggattaaaaagctggaaaatgtgtttgcaatggaatgatggatcaaacatagcaga 300
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 440 tgggggattaaaaagctggaaaatgtgtttgtaatggaatgatggatcaaacatagcaga 499

                                                                       
Query: 301 tttgcatatacagaattcatgaaaccagtataaagagaaacacatcacaaacagaggaaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 500 tttgcatatacagaattcatgaaaccagtataaagagaaacacatcacaaacagaggaag 559

                                                                       
Query: 361 ggggggggggttaattcccaatacaaagtaaaatatggccaataaaaatatgtgtatgta 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ggggggggggttaattcccaatacaaagtaaaatatggccaataaaaatatgtgtatgta 619

                                                
Query: 421 cacacacaaatttatataataatcaacctttactttc 457
           |||||||||||||||||||||||||||||| ||||||
Sbjct: 620 cacacacaaatttatataataatcaacctt-actttc 655


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 457
Length of database: 855
Length adjustment: 10
Effective length of query: 447
Effective length of database: 845
Effective search space:   377715
Effective search space used:   377715
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)