Query= MSMg01no533_h15.b1 MSMg01no533_h15.b1 CHROMAT_FILE:
MSMg01no533_h15.b1 PHD_FILE: MSMg01no533_h15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:10:41 2005
(618 letters)
>mm_chr11_35404850_35405867
Length = 1018
Score = 1172 bits (606), Expect = 0.0
Identities = 612/614 (99%)
Strand = Plus / Plus
Query: 5 gaattctttcatttgcatgcataggttgtaagatttccttgtatcttactctcttattcc 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttcatttgtatgcataggttgtaagatttccttgtatcttactctcttattcc 264
Query: 65 atcctatcccttatacatactggacttttcctcctcagatgcagcctggaaaagccattt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atcctatcccttatacatactggacttttcctcctcagatgcagcctggaaaagccattt 324
Query: 125 tctcttagtcatctctccatgggactgagtgtgtctctgaatagattctgaaacatttgt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tctcttagtcatctctccatgggactgagtgtgtctctgaatagattctgaaacatttgt 384
Query: 185 agtatgacctaggggtctcctgcatgcacgtttcttatagatttaataaatatacaaatt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agtatgacctaggggtctcctgcatgcacgtttcttatagatttaataaatatacaaatt 444
Query: 245 tacgtttttctggtgctcctaacactcagattaacaaatctgaccctggggtttgagcct 304
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tacggttttctggtgctcctaacactcagattaacaaatctgaccctggggtttgagcct 504
Query: 305 cagccaaaactgactgctctgtgaccagcacactgacatcaagaacagccttgagctaaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cagccaaaactgactgctctgtgaccagcacactgacatcaagaacagccttgagctaaa 564
Query: 365 ttaaaggtctgaagatagagctgtccattctttacccaaatgcgtatgtcaactccttag 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ttaaaggtctgaagatagagctgtccattctttacccaaatgcgtatgtcaactccttag 624
Query: 425 cagcttggggtccttaacctcccagagtggttgtctcttcctgcacagttactttctgta 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 cagcttggggtccttaacctcccagagtggttgtctcttcctgcacagttactttctgta 684
Query: 485 agtcctacacaggctcacttatacatcacatacctgactttccttaaggacaggggttca 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 agtcctacacaggctcacttatacatcacatacctgactttccttaaggacaggggttca 744
Query: 545 ttcttgttcccagtttgaaaggatacaggtactggagagatagctcagcagttatgaaca 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ttcttgttcccagtttgaaaggatacaggtactggagagatagctcagcagttatgaaca 804
Query: 605 ctggcttctcttca 618
||||||||||||||
Sbjct: 805 ctggcttctcttca 818
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 618
Length of database: 1018
Length adjustment: 10
Effective length of query: 608
Effective length of database: 1008
Effective search space: 612864
Effective search space used: 612864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no533_h15.g1 MSMg01no533_h15.g1 CHROMAT_FILE:
MSMg01no533_h15.g1 PHD_FILE: MSMg01no533_h15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:10:41 2005
(669 letters)
>mm_chr11_35563541_35564609
Length = 1069
Score = 733 bits (379), Expect = 0.0
Identities = 397/407 (97%), Gaps = 7/407 (1%)
Strand = Plus / Minus
Query: 270 agccttgcctgatttcagtaggagttaggatttggacttgtgtggttctcttttggtgag 329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1069 agccttgcctgatttcagtaggagttaggatttggacttgtgtggttctcttttggtgag 1010
Query: 330 ctgtcctgtgcactgtaagatgtt-------tccctggcttatctccagacaggcctata 382
|||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1009 ctgtcctgtgcactgtaagatgtttcaaacatccctggcttatctccagacaggcctata 950
Query: 383 actgagactggccttgactctccctcctgcttccaagtcctaagagctaggattacagtc 442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 949 actgagactggccttgactctccctcctgcttccaagtcctaagagctaggattacagtc 890
Query: 443 atgaggccccgcacctggcttcctactaggattttatatccaaagctagaaggcatgaga 502
||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 889 atgaggccctgcacctggcttcctactgggattttatatccaaagctagaaggcatgaga 830
Query: 503 agggaagtggagaccaacaccaattttgcaatgcaggtattgcgaaagggacaatctgta 562
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 829 agggaagtggagaccaacgccaattttgcaatgcaggtattgcgaaagggacaatctgta 770
Query: 563 cggctccctccctccttcattctggaggccaagcccagtcacaccctgttaattagctcc 622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 cggctccctccctccttcattctggaggccaagcccagtcacaccctgttaattagctcc 710
Query: 623 actgatttcagttgagccactctggcttaaaaagcaacaggcttagc 669
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 actgatttcagttgagccactctggcttaaaaagcaacaggcttagc 663
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 669
Length of database: 1069
Length adjustment: 10
Effective length of query: 659
Effective length of database: 1059
Effective search space: 697881
Effective search space used: 697881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
