ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCTTTGTTCAGTTCTGAGCCCCATTTTTTAATGGGGTTATTTGATTTTC
TGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCACCTA
TCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCTTTT
TGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCATTA
GGTCCCATTTGTCAATTCTCGATCTTACAGCACAAGCCATTGCTGTTCTG
TTCAGGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCCCCACTTT
CTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCCTTGATCC
ATTTAGATTTGACCTTAGTACAAGGAGATAAGTATGGATCGATTCGCAAT
CTTCTACACGACAACAACCAGTTGTGCCAGCACCAATTGTTGAAAATGCT
GTCTTTCTTCCACTGGATGGTTTTAGTTCCCTTGTCGAAGATCAAGTGAC
CATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATTCCATTGGTCT
ACTTGTCTGTCTCTATACCAGTACCATGCAGTTTTTATCACAATTGCTCT
ATAGTAAAGCTTTAAGTCTGACATGGTGATTCCGCCAGAAGTTCTTTTAT
CCTTGAGAAGACTTTTTGTTATCCTAGGTTTTTTGTTATTC

GACTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXAGATGTCTTAAGACAGCTAGCTCTTAGG
ATACAGAGCTTAGCATTACAGTACATAGCAGCAGATGAAGCCTGGACAGT
AAAGAACATGTCTAGACATGCATTGCAGAAAACTCTATGGCAGTTAGCAT
GAATGACAAGATAGGGAAATCTGGAGAAATCACTTACAACACAGTGGCCC
ACACGATGGGCCAGGATGGAGATAAATGAAGTTTGAGAGGACAGTCTTGG
AAATGGCTGTCAGAGTGTAGCAGAGGCTGGTGAATGCCAACCTGAGGATA
GCACAGGCTACTGGAACTAGGTAGAAGCAGAGCTAGCAGGCTCAGGGTTT
GCCTCAGTGGGGTAGGGTGGCATCTCTAGGCACTTGAAGGAGCTTCAACT
GGTGGGGGGCACTTTAAAATGATCTTAAAACACTAAGTACAGCATTTACC
AGGAGAAACGGTGCCTGCGTGCTGTGAGTATGTTGGTTTAGGTCCCCTGT
TTCCCCCAAATGAGACCTAACAGAGTTGCAATCTTTTTTTAAAATCCTAA
ATTGGCTTCTTTTCTTTAGGAAAATGGCCCTCGAGTCAATTAATTTCTAT
CATGGAGAAGCAGTTAGAGATCTGATTGGAGGAACAGTGAAGGAGGAGAT
GGCTGCTCCCTGGATCCACTACTATATCCAATTAACCAGCAT

Query= MSMg01no534_h05.g1 MSMg01no534_h05.g1 CHROMAT_FILE:
MSMg01no534_h05.g1 PHD_FILE: MSMg01no534_h05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:11:59 2005
         (585 letters)



>mm_chr11_71532417_71533401
          Length = 985

 Score = 1017 bits (526), Expect = 0.0
 Identities = 559/582 (96%), Gaps = 19/582 (3%)
 Strand = Plus / Plus

                                                                       
Query: 4   tgtcttaagacagctagctcttaggatacagagcttagcattacagtacatagcagcaga 63
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 204 tgtcttaagacagctagctcttaggatacagagcttagcattacaatacatagcagcaga 263

                                                                       
Query: 64  tgaagcctggacagtaaagaacatgtctagacatgcattgcagaaaactctatggcagtt 123
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 264 tgaagcctggacagtaaagaacatgcctagacatgcattgcagaaaactctatggcagtt 323

                                                                       
Query: 124 agcatgaatgacaagatagggaaatctggagaaatcacttacaacacagtggcccacacg 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 agcatgaatgacaagatagggaaatctggagaaatcacttacaacacagtggcccacacg 383

                                                                       
Query: 184 atgggccaggatggagataaatgaagtttgagaggacagtcttggaaatggctgtcagag 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 atgggccaggatggagataaatgaagtttgagaggacagtcttggaaatggctgtcagag 443

                                                                       
Query: 244 tgtagcagaggctggtgaatgccaacctgaggatagcacaggctactggaactaggtaga 303
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tgtagcagaggctggcgaatgccaacctgaggatagcacaggctactggaactaggtaga 503

                                                                       
Query: 304 agcagagctagcaggctcagggtttgcctcagtggggtagggtggcatctctaggcactt 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 agcagagctagcaggctcagggtttgcctcagtggggtagggtggcatctctaggcactt 563

                                                                       
Query: 364 gaaggagcttcaactggtggggggcactttaaaatgatcttaaaacactaagtacagcat 423
           |||||||||||||||||||||                   ||||||||||||||||||||
Sbjct: 564 gaaggagcttcaactggtggg-------------------taaaacactaagtacagcat 604

                                                                       
Query: 424 ttaccaggagaaacggtgcctgcgtgctgtgagtatgttggtttaggtcccctgtttccc 483
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 605 ttaccaggagaaacggtgcctgcgtgctgtgagtctgttggtttaggtcccctgtttccc 664

                                                                       
Query: 484 ccaaatgagacctaacagagttgcaatctttttttaaaatcctaaattggcttcttttct 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 ccaaatgagacctaacagagttgcaatctttttttaaaatcctaaattggcttcttttct 724

                                                     
Query: 544 ttaggaaaatggccctcgagtcaattaatttctatcatggag 585
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 ttaggaaaatggccctcgagtcaattaatttctatcatggag 766


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 585
Length of database: 985
Length adjustment: 10
Effective length of query: 575
Effective length of database: 975
Effective search space:   560625
Effective search space used:   560625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)