Query= MSMg01no534_i09.b1 MSMg01no534_i09.b1 CHROMAT_FILE:
MSMg01no534_i09.b1 PHD_FILE: MSMg01no534_i09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:12:04 2005
(627 letters)
>mm_chr11_119331063_119332089
Length = 1027
Score = 1197 bits (619), Expect = 0.0
Identities = 625/627 (99%)
Strand = Plus / Minus
Query: 1 agagagtgttttccacctttcttttctttggatttattattgctgtctgacaaaatttaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 830 agagagtgttttccacctttcttttctttggatttattattgctgtctgacaaaatttaa 771
Query: 61 aaatatttttaaaagattatttactcaaagcaacagcaaaatccacacaaagccttgggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 aaatatttttaaaagattatttactcaaagcaacagcaaaatccacacaaagccttgggc 711
Query: 121 tacgtgattttgccttccagttctgtatttcagccttgtctttatttgaacttcagtgta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 tacgtgattttgccttccagttctgtatttcagccttgtctttatttgaacttcagtgta 651
Query: 181 gctcagagttccctcttttctcagatgcatgttctagagcgcaccaaatgctgcaaaggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 gctcagagttccctcttttctcagatgcatgttctagagcgcaccaaatgctgcaaaggg 591
Query: 241 cttcctctagactcagacacaggagcagagcatgggtcctgtaagcctccaaaggcaaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 cttcctctagactcagacacaggagcagagcatgggtcctgtaagcctccaaaggcaaat 531
Query: 301 gtggcccccaagcacaacccaaggtctgtgttcttctatcggaagagcatggtgccagca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 gtggcccccaagcacaacccaaggtctgtgttcttctatcggaagagcatggtgccagca 471
Query: 361 cttactgtaccaggtgacattttccaggcccctccaagtcctggcgtgaactagcaggtc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 cttactgtaccaggtgacattttccaggcccctccaagtcctggcgtgaactagcaggtc 411
Query: 421 ttcaggcattgttggaagaaaagcattctgaaattccagaagcaggacaggtcataacaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 ttcaggcattgttggaagaaaagcattctgaaattccagaagcaggacaggtcataacaa 351
Query: 481 gtgaacacacatccgtacagtcagaacaaagcaaggagggcattgactgtgcagcctcaa 540
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 350 gtgaacacacatccgtacagtcagaacaaagcaaggagggcattgactatgcagcctcaa 291
Query: 541 ggatgcctatgatgcctagtcttggctgtcaatctggttagatctggaatcaactatgag 600
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 290 ggatgcctatgatgcctagtcttggctgtcaatctggttagatctggaatcaactaggag 231
Query: 601 ataaactgctgggcatacctatgaagg 627
|||||||||||||||||||||||||||
Sbjct: 230 ataaactgctgggcatacctatgaagg 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 627
Length of database: 1027
Length adjustment: 10
Effective length of query: 617
Effective length of database: 1017
Effective search space: 627489
Effective search space used: 627489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no534_i09.g1 MSMg01no534_i09.g1 CHROMAT_FILE:
MSMg01no534_i09.g1 PHD_FILE: MSMg01no534_i09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:12:04 2005
(535 letters)
>mm_chr11_119160103_119161037
Length = 935
Score = 971 bits (502), Expect = 0.0
Identities = 525/540 (97%), Gaps = 13/540 (2%)
Strand = Plus / Plus
Query: 1 caggacggccagggctccaaagagaaagtctcaaaaaaaaaaaaaaaaaaaggaaaaaag 60
||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 204 caggacggccagggctccaaagagaaagtctcaaaaaaaaaaa--------ggaaaaaag 255
Query: 61 aaaaggacagaaacaaaaagacaaagctcattcggcctcccttaaatgctcctaaacaca 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 256 aaaaggacagaaacaaaaagacaaagctcatttggcctcccttaaatgctcctaaacaca 315
Query: 121 caccagcagcatgaccgaccattcactcaaaaaaaaaaaaaaaaaaa-----tccagctc 175
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 316 caccagcagcatgaccgaccattcactcaaaaaaaaaaaaaaaaaaaaaaaatccagctc 375
Query: 176 caactcaacgacaacatcagcatctctcttctacagtccggccatcaccccagcctcctc 235
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 376 caactcaacgacaacatcagcatctctcttctacagtccggccatcacccccgcctcctc 435
Query: 236 ttctaactccaaatccagacaccaagataaactttcaaactgtaagcccgatcctgtcaa 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 ttctaactccaaatccagacaccaagataaactttcaaactgtaagcccgatcctgtcaa 495
Query: 296 ttttgcttagagccctgcagtggcttccagcggtatttaggaatgaatctcaaaatcttt 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 ttttgcttagagccctgcagtggcttccagcggtatttaggaatgaatctcaaaatcttt 555
Query: 356 acccaggcgtttaaaacatgacagggggttctttttctgttcctggcacaggtctggcca 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 acccaggcgtttaaaacatgacagggggttctttttctgttcctggcacaggtctggcca 615
Query: 416 tggcttcgagaagccagggtcaccctggtgattatgaacgcctctgggagctctctctcg 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 tggcttcgagaagccagggtcaccctggtgattatgaacgcctctgggagctctctctcg 675
Query: 476 gctcttttaactgtcccctaccaatctacctactctacccagctgctcattctcttgttt 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 gctcttttaactgtcccctaccaatctacctactctacccagctgctcattctcttgttt 735
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 50
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 535
Length of database: 935
Length adjustment: 10
Effective length of query: 525
Effective length of database: 925
Effective search space: 485625
Effective search space used: 485625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
