Query= MSMg01no537_e04.b1 MSMg01no537_e04.b1 CHROMAT_FILE:
MSMg01no537_e04.b1 PHD_FILE: MSMg01no537_e04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:35 2005
(628 letters)
>mm_chr11_7132065_7133093
Length = 1029
Score = 1120 bits (579), Expect = 0.0
Identities = 614/627 (97%), Gaps = 5/627 (0%)
Strand = Plus / Plus
Query: 5 gaattccagacagctcgagccagtgactagatcataggccttccttctgctcaccccccg 64
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 205 gaattccagacagcttgagccagtgactagatcataggccttccttctgctcaccccctg 264
Query: 65 ccccccagcttcctccagtcctggctgctttttgcttcacttctttagcctatcagtttc 124
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 -cccccagcttcctccagtcctggctgctttttgcttcacttctttagcctatcagtttc 323
Query: 125 tcgatttctgggaggatccattctgtctctacctcaatgtgaactctgctgaggctgttg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tcgatttctgggaggatccattctgtctctacctcaatgtgaactctgctgaggctgttg 383
Query: 185 gtccatagcctctccgctttctattcttggcaaccattctccctagggctcagtttccac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gtccatagcctctccgctttctattcttggcaaccattctccctagggctcagtttccac 443
Query: 245 agcatgtaggggtgactttacactgcagtccacgtgggaggatggcttctgtatcttgaa 304
||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 444 agcatgtaggggtgactttacactgcagtccacgtgggaagatggcttctgtgtcttgaa 503
Query: 305 gccctccttgcctccttaccagaagcacattctgaaggatgaacaattgtggtccctggt 364
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 504 gccctccttgcctccttaccagaagcacattctgaaggatggacaattgtggtccctggt 563
Query: 365 caacaggctccaaggaaaaccttggaccaggaattggcaggtccctaaggacccaaggta 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 caacaggctccaaggaaaaccttggaccaggaattggcaggtccctaaggacccaaggta 623
Query: 425 ataaacttggagcttccagctatgggcattcagaactgtctgcctgagaattctt---ag 481
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 624 ttaaacttggagcttccagctatgggcattcagaactgtctgcctgagaattcttcttag 683
Query: 482 ctccaacaaggagaagcagacacaagaggcagaggcccatccttttatagctcaggttgc 541
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 684 ctccaacaaggagaagcagacacaagaggcagag-cccatccttttatagctcaggttgc 742
Query: 542 tgcccttattatcccatttgtgacccactctgtaactccagtaagcactcgttctaaagt 601
|||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||
Sbjct: 743 tgcccttattatcccattcgtgacccactctgtaactccagtaagcactctttctaaagt 802
Query: 602 gttggtcctctgccatgcctctttagt 628
|||||||||||||||||||||||||||
Sbjct: 803 gttggtcctctgccatgcctctttagt 829
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1029
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1019
Effective search space: 629742
Effective search space used: 629742
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no537_e04.g1 MSMg01no537_e04.g1 CHROMAT_FILE:
MSMg01no537_e04.g1 PHD_FILE: MSMg01no537_e04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:35 2005
(440 letters)
>mm_chr11_7280724_7281563
Length = 840
Score = 824 bits (426), Expect = 0.0
Identities = 435/438 (99%), Gaps = 2/438 (0%)
Strand = Plus / Minus
Query: 1 tctgtgttgggcacaagagtggataaagtaaacaatgatctcttcttcagagaggagaat 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 596 tctgtgttgggcacaagagtggataaagtaaacaataatctcttcttcagagaggagaat 537
Query: 61 gccaggggccatggtgatggttggaaaggtccccttgtcacagtctagcatatttcatca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 gccaggggccatggtgatggttggaaaggtccccttgtcacagtctagcatatttcatca 477
Query: 121 ggaacactggctgagcttacatctctgttcctaaagacgatatctgttatctgtgtgtgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 ggaacactggctgagcttacatctctgttcctaaagacgatatctgttatctgtgtgtgt 417
Query: 181 acaccagttagacaagcagaccagacaaaagattaagaccctctggagcctggtctggga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 acaccagttagacaagcagaccagacaaaagattaagaccctctggagcctggtctggga 357
Query: 241 catgcatccatagcccctggccacagagcaaagggagaaaatccacaaactttcatcaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 catgcatccatagcccctggccacagagcaaagggagaaaatccacaaactttcatcaca 297
Query: 301 gggctggcttgcttgtactaggattggtgctatctacctcagtggctactggtgctgtgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 gggctggcttgcttgtactaggattggtgctatctacctcagtggctactggtgctgtgg 237
Query: 361 tcataagctattcagagaatccagacttcctgaatctgatggtggtggtggtggtggta- 419
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 tcataagctattcagagaatccagacttcctgaatctgatggtggtggtggtggtggtag 177
Query: 420 tgatgggtagtggtggta 437
|||| |||||||||||||
Sbjct: 176 tgat-ggtagtggtggta 160
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 440
Length of database: 840
Length adjustment: 9
Effective length of query: 431
Effective length of database: 831
Effective search space: 358161
Effective search space used: 358161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
