XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTCACC
TGACGAATACCCAATGGCTGAGAAGCACCTGAAAAAATGCTCAGCATCCT
TAATCATCATAGAAATGCAAATCAAAACAACCCTGAGATTCCATCTCACA
CCAGTCAGAATGGCTAAGATCAAAAATTCTGGTGACAGCAGATGCTGGCG
AGAATGTGGAGAAAGAGGAACACTACTCCATTGTTGGTGGGATTGCAAGC
TTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGAAAATTGGAC
ATAGTACTACGGGAGGATCCCGCAATACCTCTCCTGGGCATATATCCAGA
AGATGCTCCAACTTGTAATAAGGACACATGCTCCACTATGTTCATAGCAG
TCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGATGCCCCTCAACA
GAGGAATGGATACAAAAAATGTGGTACATTTACACAATGGAGTACTACTC
AGCTATTAAAAAGAATGAATTTATGAAATTCCTAGGCAAATGGATGGACC
TGGAGGGCATCATCCTGAGTGAGGTAACCCAATCACAACAGAACTCACAT
GATATGTACTCACTGATAAGTGGATATTAGCCCAGAAACTTAGTATACCC
GAGATATAAGATACAATTTGCAAAACACATGAAACTGGAGAAGAATGAAG
ACCAAAGTGTGGACACTTTGCCCCTTCTTAGA

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXCACAAAAGAATGAGTCTCCCTCAAAGAGAGACCTGT
TTGCTGTTTATGGCTTATGGGGTTAGTTCATGGTTGACAGCCTCTATTTC
CCTGAACCCCTGAGAATATGTGGGAGGAAGCTCACCTCATGGTGGTTGAG
GAAGAGAATGAGACACGGAGAGAGGCTAGGACCTAGATATACCTTTCAAA
GGCACACTTTCAGTGACCTCTTTCCTCTAAGGCAGACCCCATTTATTCTG
AGAGCCATGAACACATCAAGGGAATAATCCATCAGTTCAGTCAGAGCACT
CAGCATGTAATCACTTCCCAAAGCCCGTCAGCTGACAGCCAAACTTCCAA
CACATGAGCTTTCAGAGGACATCTCAGTTCAAACCACAGGCTTTGCCCAC
ACTAGGCCTGGATGCCCTGGTCTGACACCGCAAAGCCATTCCTGGCTGAC
AACAATCTGCCCCTGCCACAAATCCTGATTCTATTTTGTGTCATCCTGCC
GAAATGCCAAGGGACTGGGCTTCAATCAAAGCATAAATTCTGAAGAGAGT
ATCTTTCTATTCAATGTATCCCCTATATAAGGGGGGCTGTGGAATCCAGG
ACAGTGCGCTGTATCAAATGGGTATTCATAATAAATGTGTGGAATGGATT
TTTAAAAAGTTAGGAAAGTGAGACCAAATCTACTAAGAGTT

Query= MSMg01no538_h02.g1 MSMg01no538_h02.g1 CHROMAT_FILE:
MSMg01no538_h02.g1 PHD_FILE: MSMg01no538_h02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:17:06 2005
         (599 letters)



>mm_chr11_11910781_11911779
          Length = 999

 Score = 1143 bits (591), Expect = 0.0
 Identities = 597/599 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   cacaaaagaatgagtctccctcaaagagagacctgtttgctgtttatggcttatggggtt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacaaaagaatgagtctccctcaaagagagacctgtttgctgtttatggcttatggggtt 260

                                                                       
Query: 61  agttcatggttgacagcctctatttccctgaacccctgagaatatgtgggaggaagctca 120
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 261 agttcatggttgacagcctctattcccctgaacccctgagaatatgtgggaggaagctca 320

                                                                       
Query: 121 cctcatggtggttgaggaagagaatgagacacggagagaggctaggacctagatatacct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctcatggtggttgaggaagagaatgagacacggagagaggctaggacctagatatacct 380

                                                                       
Query: 181 ttcaaaggcacactttcagtgacctctttcctctaaggcagaccccatttattctgagag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttcaaaggcacactttcagtgacctctttcctctaaggcagaccccatttattctgagag 440

                                                                       
Query: 241 ccatgaacacatcaagggaataatccatcagttcagtcagagcactcagcatgtaatcac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccatgaacacatcaagggaataatccatcagttcagtcagagcactcagcatgtaatcac 500

                                                                       
Query: 301 ttcccaaagcccgtcagctgacagccaaacttccaacacatgagctttcagaggacatct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttcccaaagcccgtcagctgacagccaaacttccaacacatgagctttcagaggacatct 560

                                                                       
Query: 361 cagttcaaaccacaggctttgcccacactaggcctggatgccctggtctgacaccgcaaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cagttcaaaccacaggctttgcccacactaggcctggatgccctggtctgacaccgcaaa 620

                                                                       
Query: 421 gccattcctggctgacaacaatctgcccctgccacaaatcctgattctattttgtgtcat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gccattcctggctgacaacaatctgcccctgccacaaatcctgattctattttgtgtcat 680

                                                                       
Query: 481 cctgccgaaatgccaagggactgggcttcaatcaaagcataaattctgaagagagtatct 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 681 cctgccgaaatgccaagggactgggcttcaatcaaagcataaattctgaagagagcatct 740

                                                                      
Query: 541 ttctattcaatgtatcccctatataaggggggctgtggaatccaggacagtgcgctgta 599
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ttctattcaatgtatcccctatataaggggggctgtggaatccaggacagtgcgctgta 799


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 599
Length of database: 999
Length adjustment: 10
Effective length of query: 589
Effective length of database: 989
Effective search space:   582521
Effective search space used:   582521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)