Query= MSMg01no538_k07.b1 MSMg01no538_k07.b1 CHROMAT_FILE:
MSMg01no538_k07.b1 PHD_FILE: MSMg01no538_k07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:17:20 2005
(690 letters)
>mm_chr11_64140561_64141650
Length = 1090
Score = 1239 bits (641), Expect = 0.0
Identities = 674/685 (98%)
Strand = Plus / Minus
Query: 5 gaattccagttctatcaacaacttcaaatatatttacgggaggcgaaagcaagccgtgtt 64
|||||||||||| || ||||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 889 gaattccagttcaataaacaacttcaaatatctttacgggaggcgaaagcaagctgtgtt 830
Query: 65 ctttttttcccaatttaatttgatgtctgttgacaaatgatgttagactgtttcaggggg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 829 ctttttttcccaatttaatttgatgtctgttgacaaatgatgttagactgtttcaggggg 770
Query: 125 gaaaaaatcttaatatcttcaatgtgttagtggctatcatttaaattctatgtttcctcc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 gaaaaaatcttaatatcttcaatgtgttagtggctatcatttaaattctatgtttcctcc 710
Query: 185 taattgtattttctgatggcgggatgaagacagacaggcccccttacacttcaacttatt 244
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 709 taattgtattttctgatggcgggatgaagacagacaggcccccttacgcttcaacttatt 650
Query: 245 ttgtgtaataatgacaaaatgctacatctgtgttttgcttctgtccagggagccagattc 304
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 649 ttgtgtaataatgacaaaatgctacatccatgttttgcttctgtccagggagccagattc 590
Query: 305 cctttatcacccttcaaagctgttctgagtatacagaatggactgagaactctcaccatg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 589 cctttatcacccttcaaagctgttctgagtatacagaatggactgagaactctcaccctg 530
Query: 365 aacctaaaggacttttagaatcagatacaacttgggtatctaatatggtttaatatctta 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 aacctaaaggacttttagaatcagatacaacttgggtatctaatatggtttaatatctta 470
Query: 425 ttctatccatagagcatactccacacccagggaccttcctggagaactgtcctctgaagt 484
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 469 ttctatccatagagcatactccacacccagggacctccctggagaactgtcctctgaagt 410
Query: 485 tgtgtgctttcctttctgcctctattttctcttcatattttactgccttcagcctcaact 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 tgtgtgctttcctttctgcctctattttctcttcatattttactgccttcagcctcaact 350
Query: 545 tccaagccaaattcaagatctctttcttcagctccttgcctgcccatacaattctatgct 604
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 349 tccaagccaaattcaagatctctttcttcagctccttgcctgcccatacaatcctatgct 290
Query: 605 gatctcacggggaggattttgggaaaacacaaattctctgttatattcttccgtggctcc 664
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 gatctcacagggaggattttgggaaaacacaaattctctgttatattcttccgtggctcc 230
Query: 665 cttatatgggcttgctaggctcata 689
|||||||||||||||||||||||||
Sbjct: 229 cttatatgggcttgctaggctcata 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 690
Length of database: 1090
Length adjustment: 10
Effective length of query: 680
Effective length of database: 1080
Effective search space: 734400
Effective search space used: 734400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no538_k07.g1 MSMg01no538_k07.g1 CHROMAT_FILE:
MSMg01no538_k07.g1 PHD_FILE: MSMg01no538_k07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:17:20 2005
(646 letters)
>mm_chr11_63932174_63933230
Length = 1057
Score = 1189 bits (615), Expect = 0.0
Identities = 642/657 (97%), Gaps = 11/657 (1%)
Strand = Plus / Plus
Query: 1 aactcccataagtccaaacacacctctgctttctgacttaacagattttcaagttccaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aactcccataagtccaaacacacctctgctttctgacttaacagattttcaagttccaga 260
Query: 61 tgtagaagccctgctctgcttctctaaggagccatggcttctgttgcaagggtaaccctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtagaagccctgctctgcttctctaaggagccatggcttctgttgcaagggtaaccctt 320
Query: 121 aaaaagagatgtatgtacttttaggtatcttcagagtacagagttaggacagccatgcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaaagagatgtatgtacttttaggtatcttcagagtacagagttaggacagccatgcac 380
Query: 181 acactcatgtgtatgcaggg------acacacacatacacatatccgtgcgtgcacattc 234
|||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 381 acactcatatgtatgcagggacacacacacacacatatacatatccgtgcgtgcacattc 440
Query: 235 atacattacaggcttatattgacatttcaaattcagatgatcattactgttttaattcct 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atacattacaggcttatattgacatttcaaattcagatgatcattactgttttaattcct 500
Query: 295 atctttgactgtacagagggatctcttttctctgtgtgtctatgtctcagggttgtgtgt 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atctttgactgtacagagggatctcttttctctgtgtgtctatgtctcagggttgtgtgt 560
Query: 355 gccaatggaggcatatggatgtatgttgattatgcttaacaattcacagaatgatcacca 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gccaatggaggcatatggatgtatgttgattatgcttaacaattcacagaatgatcacca 620
Query: 415 cacaagtggggagttttgggtagacagcaaaggcaatggttccatggag-----ccctca 469
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 621 cacaagtggggagttttgggtagacagcaaaggcaatggttccatggagagaagccctca 680
Query: 470 gtggtattggaaaatgtttggggtacatgtggaagatcgtctcaccacaaattagttgag 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gtggtattggaaaatgtttggggtacatgtggaagatcgtctcaccacaaattagttgag 740
Query: 530 actagaggaggctttctctgtgacagggcgggggccaggctaaagcagggcctccttttg 589
||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||
Sbjct: 741 actagaggaggctttctctgtgacagggcgggggccaggctaaggcagggcctctttttg 800
Query: 590 gaactcatacgcctgccatggagttccttgggagggacatggcgccactttggttag 646
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gaactcatacgcctgccatggagttccttgggagggacatggcgccactttggttag 857
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1057
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1047
Effective search space: 665892
Effective search space used: 665892
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
