Query= MSMg01no542_a02.b1 MSMg01no542_a02.b1 CHROMAT_FILE:
MSMg01no542_a02.b1 PHD_FILE: MSMg01no542_a02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:21:53 2005
(317 letters)
>mm_chr11_12028741_12029457
Length = 717
Score = 387 bits (200), Expect = e-112
Identities = 200/200 (100%)
Strand = Plus / Minus
Query: 98 ctaattttcatttcttactctgttagtgagatggaggtgttttcatttatgtattggcta 157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 ctaattttcatttcttactctgttagtgagatggaggtgttttcatttatgtattggcta 396
Query: 158 cttgagcatctatgaagtgccttatattttcttgtattctttttcttatatttcttatat 217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 cttgagcatctatgaagtgccttatattttcttgtattctttttcttatatttcttatat 336
Query: 218 acattttcttgtattcttgtccattctttaatactatagtgtgtgtgtgtgtgtgtgtgt 277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 acattttcttgtattcttgtccattctttaatactatagtgtgtgtgtgtgtgtgtgtgt 276
Query: 278 gtgtgtgtgtgtgtgtgtgt 297
||||||||||||||||||||
Sbjct: 275 gtgtgtgtgtgtgtgtgtgt 256
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 23
Number of successful extensions: 23
Number of sequences better than 10.0: 1
Number of HSP's gapped: 21
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 717
Length adjustment: 9
Effective length of query: 308
Effective length of database: 708
Effective search space: 218064
Effective search space used: 218064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no542_a02.g1 MSMg01no542_a02.g1 CHROMAT_FILE:
MSMg01no542_a02.g1 PHD_FILE: MSMg01no542_a02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:21:53 2005
(639 letters)
>mm_chr11_11855252_11856287
Length = 1036
Score = 1187 bits (614), Expect = 0.0
Identities = 632/640 (98%), Gaps = 5/640 (0%)
Strand = Plus / Plus
Query: 1 aaaagatcttctgactttggtgccagaggcccaccttatcaaaatagaaaacaggacact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaaagatcttctgactttggtgccagaggcccaccttatcaaaatagaaaacaggacact 260
Query: 61 cgaagctctgtgcctctctggcccccctcaccatctgtctgcagtgcaagacgtccctaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cgaagctctgtgcctctctggcccccctcaccatctgtctgcagtgcaagacgtccctaa 320
Query: 121 gtagacggcctggtccctgggggtgtacaggctggtaccccagcatcaagatggtccatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtagacggcctggtccctgggggtgtacaggctggtaccccagcatcaagatggtccatt 380
Query: 181 cttcccagacactgcacagtaactgcagcaggggtaggtaggcgtctgaaagaaaagctt 240
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 381 cttcccagacactgcacagtaactgcagcaggggtagg----cgtctgaaagaaaagctt 436
Query: 241 ttggaccctgagttgtctctgtttaaatgattcctatatcaagagatcttgtagggtcat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 ttggaccctgagttgtctctgtttaaatgattcctatatcaagagatcttgtagggtcat 496
Query: 301 ggctggatgtaatcagaaggccagaggggttctggggagggcatgcatgggatactcagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 ggctggatgtaatcagaaggccagaggggttctggggagggcatgcatgggatactcagg 556
Query: 361 gaatcctttactaagcctctgagtagtgactgttttattgtgaaactgcaggacctagaa 420
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 557 gaatcctttactaagcctctgagcagtgactgttttattgtgaaactgcaggacctagaa 616
Query: 421 ggacaaaggcagtacattcatgctgaggcaggtagaggaagctagcctaaggcaggtgtc 480
||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 ggataaaggcagtacagtcatgctgaggcaggtagaggaagctagcctaaggcaggtgtc 676
Query: 481 acaccagcctcatcagaagcttt-ctgcaggcagcagggctttcccagtgacaaaaatag 539
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 677 acaccagcctcatcagaagcttttctgcaggcagcagggctttcccagtgacaaaaatag 736
Query: 540 ttagtcctggggtaaggatttgaataaagagctctctgctctagctggccttttttcctc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 ttagtcctggggtaaggatttgaataaagagctctctgctctagctggccttttttcctc 796
Query: 600 caccaaccagctgctactcagcactttgaatccttcttgt 639
||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 caccaaccagctgctactcagcactttgaatccttcttgt 836
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1036
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1026
Effective search space: 645354
Effective search space used: 645354
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
