Query= MSMg01no542_i07.b1 MSMg01no542_i07.b1 CHROMAT_FILE:
MSMg01no542_i07.b1 PHD_FILE: MSMg01no542_i07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:22:35 2005
(631 letters)
>mm_chr11_67775303_67776333
Length = 1031
Score = 642 bits (332), Expect = 0.0
Identities = 383/414 (92%), Gaps = 25/414 (6%)
Strand = Plus / Minus
Query: 219 gtggcatgtaaccccaggactggaagg-ctggggaaggagacaggcagaaccccagaatc 277
|||||||||||||||||||||||| || || |||||||||||||||||||||||||||||
Sbjct: 1031 gtggcatgtaaccccaggactggagggcct-gggaaggagacaggcagaaccccagaatc 973
Query: 278 agcctaaccaaccattatgtctgagaggccctatctcaaaatataaggtgaagggccata 337
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 972 agcctaaccaaccattatgtctgagaggccttatctcaaaatataaggtgaagggccata 913
Query: 338 gaaaaaaatatccaaccttatccgcaggcctacacaacacacacacgcacacatacacac 397
|||||||| ||||||| |||||| |||||||||||| ||
Sbjct: 912 gaaaaaaa-atccaacattatcctcaggcctacaca----------------------ac 876
Query: 398 acacacacacacacacacacacatgcacacgtgcacacacataccacttctcctcttgag 457
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 875 acacacacacacacacacacacatgcacacgtgcacacacataccacttctcctcttgag 816
Query: 458 ggagtgaagcactgttgcactgtgagtctcccaggcatcaggatcatggaagcctgggta 517
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 ggagtgaagcactgttgcactgtgagtctcccaggcatcaggatcatggaagcctgggtc 756
Query: 518 ctgtgtcacgtggcctggctttctcattaccactgcccacttttcaagtagattttctac 577
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 ctgtgtcacgtggcctggctttctcattaccactgcccacttttcaagtagattttctac 696
Query: 578 acttcctatcaatgctgtgttcctttcttgaaattatttgtctgctatattgag 631
|||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 695 acttcctatcaatgctgtgttcctttcttgaacttatttgtctgctatattgag 642
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1031
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1021
Effective search space: 634041
Effective search space used: 634041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no542_i07.g1 MSMg01no542_i07.g1 CHROMAT_FILE:
MSMg01no542_i07.g1 PHD_FILE: MSMg01no542_i07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:22:35 2005
(558 letters)
>mm_chr11_67594380_67595335
Length = 956
Score = 864 bits (447), Expect = 0.0
Identities = 477/487 (97%), Gaps = 4/487 (0%)
Strand = Plus / Plus
Query: 73 cctgcccctgcccctgcccctaccctgatcatggtttcccctgcccctgccccacccctg 132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 cctgcccctgcccctgcccctaccctgatcatggtttcccctgcccctgccccacccctg 332
Query: 133 ccccgcccttaccctacccctggcttctcctacattactgctgagagagacaactctcct 192
||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 333 ccccgcccttaccctacccctggcttctcctgcattactgctgagagagaccgctctcct 392
Query: 193 cagaataaggacactcacttctttcatgtgtttgggatgcgatttgagggtgtcccccaa 252
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 393 cagaataaggacactcacttctttcatgtgtttgggatgcgatttgaggatgtcccccaa 452
Query: 253 aggttcaagtactgagcctggttcagtgtggtggttaaggcagtagaatatttttt-cag 311
|||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||
Sbjct: 453 aggttcaagtactgagcctggttcagtgtggtagttaaggcagtagaa-atttttttcag 511
Query: 312 aggtggaagctagtgaaagatgactaggtcattggctgctaccctctttctcctgagagc 371
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 512 aggtggaagctagtgaaagatgattaggtcattggctgctaccctctttctcctgagagc 571
Query: 372 ctggttagttcctgaattggtaaatcccttgtgcctccagtcacacagtggctgctctct 431
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 572 ctggttagttcctgaattggtaaatccct-gtgcctccagtcacacagtggctgctctc- 629
Query: 432 acctcttgtgcctactcccaccgggacagcatctgccatgtgtaatttagatagaactcc 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 acctcttgtgcctactcccaccgggacagcatctgccatgtgtaatttagatagaactcc 689
Query: 492 aggtcctcatcagagccaagctgaagccaggctcttgctcttataggtccataattgtaa 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 aggtcctcatcagagccaagctgaagccaggctcttgctcttataggtccataattgtaa 749
Query: 552 gctaaaa 558
|||||||
Sbjct: 750 gctaaaa 756
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 59
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 558
Length of database: 956
Length adjustment: 10
Effective length of query: 548
Effective length of database: 946
Effective search space: 518408
Effective search space used: 518408
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
