Query= MSMg01no545_i13.b1 MSMg01no545_i13.b1 CHROMAT_FILE:
MSMg01no545_i13.b1 PHD_FILE: MSMg01no545_i13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:26:31 2005
(594 letters)
>mm_chr11_18950240_18951237
Length = 998
Score = 1091 bits (564), Expect = 0.0
Identities = 586/594 (98%), Gaps = 6/594 (1%)
Strand = Plus / Plus
Query: 6 gaattcttttc-c-tttccaatgtccttgcttcttgaa-cactaatagcagaaaaaggac 62
||||||||||| | ||| ||||||||||||||||||| |||||||||||||||||||||
Sbjct: 206 gaattcttttcacattta-aatgtccttgcttcttgaaacactaatagcagaaaaaggac 264
Query: 63 agtaagtgattgcatatggaaaatgaaaatgctcgctaatttcagaatgaaaggtcaggg 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agtaagtgattgcatatggaaaatgaaaatgctcgctaatttcagaatgaaaggtcaggg 324
Query: 123 gttcaactaattatgcttgcataaatgggctctagtccttcacgttgagtttaggttgca 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gttcaactaattatgcttgcataaatgggctctagtccttcacgttgagtttaggttgca 384
Query: 183 tgtctttacagctcagagagctgtatttcagatcctatgcccaccatggatcaaagttgt 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tgtctttacagctcagagagctgtatttcagatcctatgcccaccatggatcaaagttgt 444
Query: 243 cactgtctatatatccaaagaaaaatgtaaaagaaatttattacagggcttttattctct 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cactgtctatatatccaaagaaaaatgtaaaagaaatttattacagggcttttattctct 504
Query: 303 tgaaaaacagtattcttattaaaaaaaaaaa--ccaaaaaccaaattacacttcttctta 360
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 505 tgaaaaacagtattcttattaaaaaaaaaaaaaccaaaaaccaaattacacttcttctta 564
Query: 361 gagagtgaaccttcagatcagctctttgattgcaaagctgtggggatgtggggcttcttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gagagtgaaccttcagatcagctctttgattgcaaagctgtggggatgtggggcttcttt 624
Query: 421 gtctaggtgctttttggttgattagaaagtgtgctgagatccctacattctaactgctag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gtctaggtgctttttggttgattagaaagtgtgctgagatccctacattctaactgctag 684
Query: 481 tgacactggaagacttttagcattccgtgtacttttgtgactttgacttggggccgaatt 540
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tgacactggaggacttttagcattccgtgtacttttgtgactttgacttggggccgaatt 744
Query: 541 tgaccattccatatgaaaatgcggtcttccccacatccacaggttggagtctag 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tgaccattccatatgaaaatgcggtcttccccacatccacaggttggagtctag 798
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 594
Length of database: 998
Length adjustment: 10
Effective length of query: 584
Effective length of database: 988
Effective search space: 576992
Effective search space used: 576992
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no545_i13.g1 MSMg01no545_i13.g1 CHROMAT_FILE:
MSMg01no545_i13.g1 PHD_FILE: MSMg01no545_i13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:26:31 2005
(441 letters)
>mm_chr11_19071907_19072747
Length = 841
Score = 806 bits (417), Expect = 0.0
Identities = 435/441 (98%)
Strand = Plus / Minus
Query: 1 aaggaattctaaagacgattcagtatgagttctaatgccttgtcagagttgaaacttcag 60
|||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 641 aaggaattctaaagactattcggtatgagttctaatgccttgtcagagttgaaacttcag 582
Query: 61 caggcaaaaaagcacctggaggtcctggtcccacatccccacttctttgttaggactcgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 caggcaaaaaagcacctggaggtcctggtcccacatccccacttctttgttaggactcgt 522
Query: 121 cccccaacttgactccactcttcagcccttttcatcgcctcccaaagacagcaaggagct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 cccccaacttgactccactcttcagcccttttcatcgcctcccaaagacagcaaggagct 462
Query: 181 cgtcttcacctccagtcttccctcttcttggaaatagcttccctgctccactcagaatat 240
|||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 461 cgtcttcacccccagtcttccctcttcttggaaatagcttccctgatccactcagaacat 402
Query: 241 ttgtctgttccctgacccaagcagaatcaaatatgccttgcctaagctctgctcgccttt 300
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 401 ttgtctgttccctgacccaagcagaaacaaatatgccttgcctaagctctgctcgccttt 342
Query: 301 cctctagaaagggtgtcactcataaggttacaatgtgaccttaggtccagactgcctttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 cctctagaaagggtgtcactcataaggttacaatgtgaccttaggtccagactgcctttg 282
Query: 361 gaagtagctgaatatcctaggatttcaatatgaacttggaaattgtgattcaattacaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 gaagtagctgaatatcctaggatttcaatatgaacttggaaattgtgattcaattacaaa 222
Query: 421 acaagaactacaattaagtac 441
|||||||||||||||||||||
Sbjct: 221 acaagaactacaattaagtac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 441
Length of database: 841
Length adjustment: 9
Effective length of query: 432
Effective length of database: 832
Effective search space: 359424
Effective search space used: 359424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
