Query= MSMg01no546_i05.b1 MSMg01no546_i05.b1 CHROMAT_FILE:
MSMg01no546_i05.b1 PHD_FILE: MSMg01no546_i05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:27:50 2005
(242 letters)
>mm_chr11_82138733_82139374
Length = 642
Score = 460 bits (238), Expect = e-134
Identities = 241/242 (99%)
Strand = Plus / Plus
Query: 1 aaacgaatgccagagggaacttctcaagggtgttagatcaagagtctggctccttggaag 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 201 aaacgaatgccagagggaacttctcaagggtgttagaccaagagtctggctccttggaag 260
Query: 61 tcattacctgaacaacctgttccagtgacatgccagcggcagatgagatatatctttaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcattacctgaacaacctgttccagtgacatgccagcggcagatgagatatatctttaaa 320
Query: 121 ggagtcttatcatctagaaatgcatattaacatatttccatataaaatgatacgcttgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggagtcttatcatctagaaatgcatattaacatatttccatataaaatgatacgcttgaa 380
Query: 181 agcaatcaggggagggaaggcaggcaggaaggagtgggtggatagagagatggaacaggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agcaatcaggggagggaaggcaggcaggaaggagtgggtggatagagagatggaacaggg 440
Query: 241 gt 242
||
Sbjct: 441 gt 442
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 642
Length adjustment: 9
Effective length of query: 233
Effective length of database: 633
Effective search space: 147489
Effective search space used: 147489
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no546_i05.g1 MSMg01no546_i05.g1 CHROMAT_FILE:
MSMg01no546_i05.g1 PHD_FILE: MSMg01no546_i05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:27:50 2005
(213 letters)
>mm_chr11_82281170_82281783
Length = 614
Score = 398 bits (206), Expect = e-115
Identities = 212/214 (99%), Gaps = 1/214 (0%)
Strand = Plus / Minus
Query: 1 tcccaaactccctggaggatggatggagataggaagggatacaggctgggtattcttttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 tcccaaactccctggaggatggatggagataggaagggatacaggctgggtattcttttt 355
Query: 61 t-aaaaaagaaaagaaaacgttgtatccattccaagcagcaccctccagaaatactcaac 119
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 taaaaaaagaaaagaaaacgttgtatccattccaagcagcaccctccagaaatactcaac 295
Query: 120 ccagtgtctctgagatggggctgggctagggtgaggctgggagttaggtattatgttagt 179
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 294 ccagtgtctctgagatggggctgggctagggtgaggctgggagttgggtattatgttagt 235
Query: 180 gtcttcttagtgttgcctaagggcacagagagga 213
||||||||||||||||||||||||||||||||||
Sbjct: 234 gtcttcttagtgttgcctaagggcacagagagga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 213
Length of database: 614
Length adjustment: 9
Effective length of query: 204
Effective length of database: 605
Effective search space: 123420
Effective search space used: 123420
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
