XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTCAACATCC
TTAATCATCAGGGAAATGCAAATCAAAATAAGCTTGAGATTCTACCTCAC
ACCAGTCAGAATGTCTAAGATTAAAAAAAAAATCAGTTGACACCAGATGC
TGGTGAGGATGTAGAGAAAGAGGATCACATTGTTGGTGGGATTGTAAGCT
GGTACAACTACTCTGGAAATCAGTTTGGCAGCTTTTCAGAAAAATTGGAC
ATAGTACTATTGGAAGATCCAGCAAGACTTCTCCTGGGCATGTACCCAGA
AGATTGTACAATCTGTAATAAAGACACATGCTCCACTATGTTCATAGCAG
CCTTATTTATAATAGCAAGAAGTTGGAAAGAACCTAGATGCCCCTCAACA
GAAGAATGGATACAGAAAATGTTGTACATTTACACAATGGAATACTACTC
AGAAATTAAAAACATTAATTTATGAAATTCTTAGGTAAATGGATGGATCT
ATAGAATATCATCCCGAGTGATGTAACCCAATCACAAAGGACCTCACATG
ATATGTACTCACTGGTAGGTGATATTAGCCCAGAAACTTAGAATACCGAA
GATACAGTTTGCACAACATATGACACTCAAGATAAGGAAGACCAAAGTGT
GGATACTTAGTTCCTTCTTAGATTGGGGAACAAAATACCCATGAAAGGAG
TTGCAGAAACAATATTCGGAGCAGAACCTGAATGATATGACCATCCAGAG
ACTGACCCACTTTG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXCACTGACAAAGGGTAAAAATAACTATTTCTGTCTCTCATC
TTGTTATATATTTAGCAGTGTTTTTTTTTTCATTAGTTTCAGAAGGCCAT
GATTTTTGTGTGACCAAGCAATGAATTGGCAAGTAGCTTGTAGTTATAAA
ACAAGATAGCTGTGGATAAAGCAGAAGTTGTGACTCCAATAAAAACAAAC
CAAGAAACAATATGATGACATATATAATCATCTCTTAAAACATACTTTTC
TAAGAATTTACTTAAATCTTTTAAAATAATTTCAGATTTCTTTGTTTCGA
GATGCATACTGATTATCTAATATTAAACTAAATTGTTTGTGATTATATAT
TTTCTAAGAGATTGTATTTAATCATAATCTTAAGAATCTTGGAGTATTTT
AATTGAAATTTAAAGTTTTAAGAATTATAAAATTGACTATTCATAGACTA
AACTATATCTATGAATTTTGAGAAAACACAGTTTAAGGGTTAATAAAACT
TTTGAGAAAACATTGAATGAAGGAAGGAATAGGTAAAATTGTCTTGGAAA
ATTCTTTACCAAATCACCACCATTTTACTAAATCAACATAACCCATGACT
ACATTCTAAACATTTGTCCAAATATATTTGTCCAAATATGGAGTCCTAAT
CCTTTGTCAAAACAACTTCTATCTGCAGCATACAAAGACAACTGCAGGAA
ACCCACTATCAT

Query= MSMg01no547_p04.g1 MSMg01no547_p04.g1 CHROMAT_FILE:
MSMg01no547_p04.g1 PHD_FILE: MSMg01no547_p04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:29:43 2005
         (697 letters)



>mm_chr11_14182597_14183695
          Length = 1099

 Score = 1270 bits (657), Expect = 0.0
 Identities = 687/701 (98%), Gaps = 8/701 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   cactgacaaagggtaaaaataactatttctgtctctcatcttgttatatatttagcagtg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cactgacaaagggtaaaaataactatttctgtctctcatcttgttatatatttagcagtg 260

                                                                       
Query: 61  -----ttttttttttcattagtttcagaaggccatgatttttgtgtgaccaagcaatgaa 115
                ||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttttttttttttttcatcagtttcagaaggccatgatttttgtgtgaccaagcaatgaa 320

                                                                       
Query: 116 ttggcaagtagcttgtagttataaaacaagatagctgtggataaagcagaagttgtgact 175
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 321 ttggcaagtagcttgtagttataaaagaagatagctgtggataaagcagaagttgtgact 380

                                                                       
Query: 176 ccaataaaaacaaaccaagaaacaatatgatgacatatataatcatctcttaaaacatac 235
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccaataaaagcaaaccaagaaacaatatgatgacatatataatcatctcttaaaacatac 440

                                                                       
Query: 236 ttttctaagaatttacttaaatcttttaaaataatttcagatttctttgtttcgagatgc 295
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttttctaagaatttacttaaatcttttaaaataatttcagatttctttgtttcgagatgc 500

                                                                       
Query: 296 atactgattatctaatattaaactaaattgtttgtgattatatattttctaagagattgt 355
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 501 atactgattatctaatattaaactaaattgtttgtgattatatattttctaagaggttgt 560

                                                                       
Query: 356 atttaatcataatcttaagaatcttggagtattttaattgaaatttaaagttttaagaat 415
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atttaatcataatcttaagaatcttggagtattttaattgaaatttaaagttttaagaat 620

                                                                       
Query: 416 tataaaattgactattcatagactaaactatatctatgaattttgagaaaacacagttta 475
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tataaaattgactattcatagactaaactatatctatgaattttgagaaaacacagttta 680

                                                                       
Query: 476 agggttaataaaacttttgagaaaacattgaatgaaggaaggaataggtaaaattgtctt 535
           ||||||||   |||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 681 agggttaa---aacttttgagaaaacattgaatgaaggaaggaatagataaaattgtctt 737

                                                                       
Query: 536 ggaaaattctttaccaaatcaccaccattttactaaatcaacataacccatgactacatt 595
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 ggaaaattctttaccaaatcaccaccattttactaaatcaacataacccatgactacatt 797

                                                                       
Query: 596 ctaaacatttgtccaaatatatttgtccaaatatggagtcctaatcctttgtcaaaacaa 655
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 ctaaacatttgtccaaatatatttgtccaaatatggagtcctaatcctttgtcaaaacaa 857

                                                    
Query: 656 cttctatctgcagcatacaaagacaactgcaggaaacccac 696
           |||||||||||| ||||||||||||||||||||||||||||
Sbjct: 858 cttctatctgcatcatacaaagacaactgcaggaaacccac 898


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 697
Length of database: 1099
Length adjustment: 10
Effective length of query: 687
Effective length of database: 1089
Effective search space:   748143
Effective search space used:   748143
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)