Query= MSMg01no548_i03.b1 MSMg01no548_i03.b1 CHROMAT_FILE:
MSMg01no548_i03.b1 PHD_FILE: MSMg01no548_i03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:30:26 2005
(233 letters)
>mm_chr11_68650406_68651038
Length = 633
Score = 410 bits (212), Expect = e-119
Identities = 221/224 (98%), Gaps = 1/224 (0%)
Strand = Plus / Plus
Query: 10 ggaattctctatgtagtatgaggctggcctcaaacttgcaaagatgcaactgtttttgtt 69
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 ggaattctctatgtag-atgaggctggcctcaaacttgcaaagatgcaactgtttttgtt 269
Query: 70 tccagtacaccaggtttaaaggcatgcattaccacatctcagattttttaaactaccact 129
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 tccagtataccaggtttaaaggcatgcattaccacatctcagattttttaaactaccact 329
Query: 130 atgaaatcatttttcaatactgaatttttaatatttccaattatatatctaccctgaaaa 189
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 330 atgaaatcatttttcaatactgaatttttaatatttccaattatatacctaccctgaaaa 389
Query: 190 tatcttcatatgttaaaagaaaaaggatataaagaggcaaatct 233
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 tatcttcatatgttaaaagaaaaaggatataaagaggcaaatct 433
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 233
Length of database: 633
Length adjustment: 9
Effective length of query: 224
Effective length of database: 624
Effective search space: 139776
Effective search space used: 139776
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no548_i03.g1 MSMg01no548_i03.g1 CHROMAT_FILE:
MSMg01no548_i03.g1 PHD_FILE: MSMg01no548_i03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:30:26 2005
(390 letters)
>mm_chr11_68841090_68841879
Length = 790
Score = 731 bits (378), Expect = 0.0
Identities = 387/390 (99%)
Strand = Plus / Minus
Query: 1 ccggatgagacagtcagggctatacagaccctgtttcaaacatgtgcacatacacacaca 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 ccggacgagacagtcagggctatacagaccctgtttcaaacatgtgcacatacacacaca 613
Query: 61 tacactcatacacccacacacagagcatgattgaaagacaaaaacaaaaaaacaacaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 tacactcatacacccacacacagagcatgattgaaagacaaaaacaaaaaaacaacaaaa 553
Query: 121 aacacataatctgaacaagtagtagtgatgaaactggcaacaagtagtcccacgagcctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 aacacataatctgaacaagtagtagtgatgaaactggcaacaagtagtcccacgagcctt 493
Query: 181 ctagaattcccttacctgggctggctggaacacacaggatggcagacagacccaggacca 240
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 ctagaattctcttacctgggctggctggaacacacaggatggcagacagacccaggacca 433
Query: 241 ggctaggtggcgattcagttggcagctggtcaggtgactggcttctgggagaggcagcat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 ggctaggtggcgattcagttggcagctggtcaggtgactggcttctgggagaggcagcat 373
Query: 301 ggcctttgggtcaaaagtagcccaagccctgtgctgcccttcctctgccagggcgagcat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 ggcctttgggtcaaaagtagcccaagccctgtgctgcccttcctctgccagggcgagcat 313
Query: 361 agtatggaaagagtagggagtctgcagtgg 390
|||| |||||||||||||||||||||||||
Sbjct: 312 agtagggaaagagtagggagtctgcagtgg 283
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 390
Length of database: 790
Length adjustment: 9
Effective length of query: 381
Effective length of database: 781
Effective search space: 297561
Effective search space used: 297561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
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