Query= MSMg01no548_k08.b1 MSMg01no548_k08.b1 CHROMAT_FILE:
MSMg01no548_k08.b1 PHD_FILE: MSMg01no548_k08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:30:37 2005
(439 letters)
>mm_chr11_16620294_16621132
Length = 839
Score = 833 bits (431), Expect = 0.0
Identities = 434/435 (99%), Gaps = 1/435 (0%)
Strand = Plus / Plus
Query: 5 gaattcaaacaaaattacaaacaataaaaatggaacttctaataatgttcatatgacttt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattcaaacaaaattacaaacaataaaaatggaacttctaataatgttcatatgacttt 265
Query: 65 attatgattctccttttgatttttaataaccacttgaaatttaaaaaaaatctttttttt 124
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 266 attatgattctccttttgatttttaataaccacttgaaattt-aaaaaaatctttttttt 324
Query: 125 tatttctctatagccatattagctgtcactcaagtcatgccctaagtgggctttgctgtc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tatttctctatagccatattagctgtcactcaagtcatgccctaagtgggctttgctgtc 384
Query: 185 tacactcacttccggcccttcaatacctcaacctgtcaaatctccattttttggctttag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tacactcacttccggcccttcaatacctcaacctgtcaaatctccattttttggctttag 444
Query: 245 ccaattagaggtctgtggtttagcttgttatatttatatcatttaaaaatgaaagagtca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ccaattagaggtctgtggtttagcttgttatatttatatcatttaaaaatgaaagagtca 504
Query: 305 taaccatatcctacaagatttacttcataagcaaaacaataaaaatcaatgcttgagtaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 taaccatatcctacaagatttacttcataagcaaaacaataaaaatcaatgcttgagtaa 564
Query: 365 ctcttttatactccctctgaaaagactatttggttatattgaagccaacaaactatagta 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ctcttttatactccctctgaaaagactatttggttatattgaagccaacaaactatagta 624
Query: 425 aaggtagggctgagt 439
|||||||||||||||
Sbjct: 625 aaggtagggctgagt 639
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 439
Length of database: 839
Length adjustment: 9
Effective length of query: 430
Effective length of database: 830
Effective search space: 356900
Effective search space used: 356900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no548_k08.g1 MSMg01no548_k08.g1 CHROMAT_FILE:
MSMg01no548_k08.g1 PHD_FILE: MSMg01no548_k08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:30:37 2005
(424 letters)
>mm_chr11_16798569_16799384
Length = 816
Score = 716 bits (370), Expect = 0.0
Identities = 408/424 (96%), Gaps = 8/424 (1%)
Strand = Plus / Minus
Query: 1 cagagttcaggagtgaggacatgggtaggccttcagacaccatcctatatctaatatata 60
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 616 cagagttcaggagtgaggacgtgggtaggccttcagacaccatcctatatctaatatata 557
Query: 61 gctgttctgggttaggcagaggtcagctactgaagcaggttgaatagccccaaattttcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 gctgttctgggttaggcagaggtcagctactgaagcaggttgaatagccccaaattttcc 497
Query: 121 tatttatttggaacttcagaatggaatcctatttggaaaagggattataaaaatctgatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 tatttatttggaacttcagaatggaatcctatttggaaaagggattataaaaatctgatt 437
Query: 181 gcctacagatgttgagatacatctacctggattttggatgggccctaaatccaatgattg 240
|||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 436 gcctacagatgttgagatacatctacctggattttggatgggccctaagtccagtgattg 377
Query: 241 agacctcttatatatatatatatatacacgtatttatgggatgcaacttgatttttgtat 300
||||||||| | | | | |||||| ||||||||||||||||||||||||||||||
Sbjct: 376 agacctctttttt-tct-----tataca--tatttatgggatgcaacttgatttttgtat 325
Query: 301 gtattcctgatatggagaaactaagacaaactaagtagcatagctgcaacctgagctctt 360
|||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 324 gtattcctgatatggagaaactaagacaaactaagtagcatagctgtaacctcagctctt 265
Query: 361 tgtggttactgctgtctcagtattttccagtctttatgtgaagagagaggggctccagga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tgtggttactgctgtctcagtattttccagtctttatgtgaagagagaggggctccagga 205
Query: 421 caca 424
||||
Sbjct: 204 caca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 424
Length of database: 816
Length adjustment: 9
Effective length of query: 415
Effective length of database: 807
Effective search space: 334905
Effective search space used: 334905
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
