BAC Information

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BAC

Clone NameB6Ng01-002B04
Chromosome12 (Build37)
Map Location 101,518,296 - 101,626,924
singlet/doubletdoublet
Overlap geneTtc7b
Upstream geneChes1, LOC100039892, 2610021K21Rik, Tdp1, LOC100040041, Kcnk13, Psmc1, BC002230, Calm1
Downstream geneRps6ka5, LOC100040123, 9030617O03Rik, EG667148, Gpr68, 0610010D24Rik, LOC100040184, Smek1, 4930463M05Rik, Mylf-ps
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-002B04.bB6Ng01-002B04.g
ACCDH840208DH840209
length8041,051
definitionDH840208|Mus musculus domesticus DNA, BAC clone: B6Ng01-002B04, 5' end.DH840209|Mus musculus domesticus DNA, BAC clone: B6Ng01-002B04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(101,518,296 - 101,519,099)(101,625,868 - 101,626,924)
sequence
gaattctttgaatgccacaggcctttgggggattcctagccgcaagggtt
agtctagcccagaacacttaggtggtaatgactcagctgactgactggtc
ccagcccagcatccacactcctccaggcacctcggctgaaagtccctaga
atccaggcctcactgttgctctccccaggacagcttcagtctggagtctc
ccttctctcttggttttcgacttttctcttttcttttctttttttgaact
tggtcttatgaagcctgggctagccttgaacttgctctataaccgactgg
ctgtgaacttctgattcttttatttctatctcccaagtgctaggattcaa
gcatgtgcccattgtctgtatcattctcatatcattgcataaacttcctt
tcatctgatgagctcacacaatgagtgtggtataccaggctcaattccct
gtatatagggtatagaaagcatatgcatataaaacatatataaatcaata
tttatatgcctatatatgtatatatctattacacacatacacacacacaa
cacacacatatttatattagatagatatattggtttttcaggacacggta
tctctgtgtagccctgctgtcctggaactcacccagtgaccaggctggac
ttgagtgctcacatctgcctgcctctgcctccccggggctaggattaaag
ggtttgaccatggcctccaacatgaatacactttcaacgatctgacatat
gttctattcatccacctcgcaaactcagagagcttgaacccccaatgtca
catg
gaattccaccatgttctgttccagccctggcttccgagcattgttgggaa
agccagcctgaggtgttctagctgcatggtacacctaggctggtgtgagg
caacctgacatgagcattggaagggcctggtcatctaagccttttctttg
cctttatgtatctctcttgactctataacttcatttcattttagcaatca
cctcactccaccttgataaagaaagcaatgtctgggtggacgctcccctc
agtccttctttttacttgtaggttggcctggcgctggggcctgttgctct
gtgtcttctgggacctggtgtgttccctctgtgttctctctgtctgctca
gccctccttgttgaagattgttctagtcaccaccacaaggaaatgaggac
atgatgagacaacctacctacatcctctggccttggctccacagagtctt
ccttcctcctcacctgcctcatcttacctcctctggccctaaggcctgct
ttcctccagtgtgctacacagtatccttgaagagccaagtgctttgttag
ctcctgcatctgcttggcttgttttccaacctattgctctcttcctgaga
ccctttctgagtggtgtcatccttccatagcctctccccagggtctccac
ttgagtttcctttctccatggttctcttacctttcccttcaaaagaaatg
tcgcccaccctcctcctgtagcttgcccttttctgggctctaacttgggc
atgttgtgagttttgaagctcctagaacattccattctctagcctctgtg
gtggtcttctacctcacctgcctctggtggccctctcctatctctgagat
gattatgtcatttttctgcagggaccttgctatctaagaggcagctcttg
actgtatgcacggtagctggctgctactagaaagccagagcctgggtgtg
ccttctctagggtactggctggagccggagagtgaggcagcctcgtaatc
aagctcatggtagtgggcgatctcagggtagagagatgaaaagagtatct
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_101518296_101519099
seq2: B6Ng01-002B04.b_43_846

seq1  GAATTCTTTGAATGCCACAGGCCTTTGGGGGATTCCTAGCCGCAAGGGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGAATGCCACAGGCCTTTGGGGGATTCCTAGCCGCAAGGGTT  50

seq1  AGTCTAGCCCAGAACACTTAGGTGGTAATGACTCAGCTGACTGACTGGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTAGCCCAGAACACTTAGGTGGTAATGACTCAGCTGACTGACTGGTC  100

seq1  CCAGCCCAGCATCCACACTCCTCCAGGCACCTCGGCTGAAAGTCCCTAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCCAGCATCCACACTCCTCCAGGCACCTCGGCTGAAAGTCCCTAGA  150

seq1  ATCCAGGCCTCACTGTTGCTCTCCCCAGGACAGCTTCAGTCTGGAGTCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGGCCTCACTGTTGCTCTCCCCAGGACAGCTTCAGTCTGGAGTCTC  200

seq1  CCTTCTCTCTTGGTTTTCGACTTTTCTCTTTTCTTTTCTTTTTTTGAACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTCTCTTGGTTTTCGACTTTTCTCTTTTCTTTTCTTTTTTTGAACT  250

seq1  TGGTCTTATGAAGCCTGGGCTAGCCTTGAACTTGCTCTATAACCGACTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTTATGAAGCCTGGGCTAGCCTTGAACTTGCTCTATAACCGACTGG  300

seq1  CTGTGAACTTCTGATTCTTTTATTTCTATCTCCCAAGTGCTAGGATTCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAACTTCTGATTCTTTTATTTCTATCTCCCAAGTGCTAGGATTCAA  350

seq1  GCATGTGCCCATTGTCTGTATCATTCTCATATCATTGCATAGACTTCGTT  400
      ||||||||||||||||||||||||||||||||||||||||| ||||| ||
seq2  GCATGTGCCCATTGTCTGTATCATTCTCATATCATTGCATAAACTTCCTT  400

seq1  TCATCTGATGAGCTCACACGATGAGTGTGGTATACCAGGCTCAATTCCCT  450
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TCATCTGATGAGCTCACACAATGAGTGTGGTATACCAGGCTCAATTCCCT  450

seq1  GTATATAGTGTATAGAAAGCATATGCATATAAAACATATATAAATCAATA  500
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GTATATAGGGTATAGAAAGCATATGCATATAAAACATATATAAATCAATA  500

seq1  TTTATATGCCTATATATGTATATATCTATTACACACATACACACACACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATATGCCTATATATGTATATATCTATTACACACATACACACACACAA  550

seq1  CACACACATATTTATATTAGATAGATATATTGGTTTTTCAAGACAGGGTA  600
      |||||||||||||||||||||||||||||||||||||||| |||| ||||
seq2  CACACACATATTTATATTAGATAGATATATTGGTTTTTCAGGACACGGTA  600

seq1  TCTCTGTGTAGCCCTGCTGTCCTGGAACTCACTCTGTAGACCAGGCTGGA  650
      |||||||||||||||||||||||||||||||| | || ||||||||||||
seq2  TCTCTGTGTAGCCCTGCTGTCCTGGAACTCACCCAGT-GACCAGGCTGGA  649

seq1  CTTGAGTTCAGAGATCTGCCTGCCTCTGCCTCCCCAGGGCTAGGATTAAG  700
      ||||||| |  | |||||||||||||||||||||| ||||||||||||| 
seq2  CTTGAGTGCTCACATCTGCCTGCCTCTGCCTCCCCGGGGCTAGGATTAAA  699

seq1  GGCATTGACCATCACCACCAACATGAATACACTTTCAACAATTCATAAGA  750
      ||  ||||||||  || |||||||||||||||||||||| ||     | |
seq2  GGGTTTGACCATGGCCTCCAACATGAATACACTTTCAACGATCTGACATA  749

seq1  TGTTCTATTTATCAACCT-GGAAGCTCAGAGAGCTTGTATACCCAATGTC  799
      ||||||||| ||| |||| | || ||||||||||||| |  |||||||||
seq2  TGTTCTATTCATCCACCTCGCAAACTCAGAGAGCTTGAACCCCCAATGTC  799

seq1  ACATG  804
      |||||
seq2  ACATG  804

seq1: chr12_101625868_101626924
seq2: B6Ng01-002B04.g_68_1118 (reverse)

seq1  AAGTTACTC-TTTCTCTTCTCTACCCTGAGATCGCCCACTACCAT-AGCT  48
      ||| ||||| ||||   |||||||||||||||||||||||||||| ||||
seq2  AAGATACTCTTTTCATCTCTCTACCCTGAGATCGCCCACTACCATGAGCT  50

seq1  GTGTTACTGAGCTGCCCTCACTCTCCGGCCTCAGCCAGTACCACTAGAGA  98
         ||||   |||| ||||||||||||||  ||||||||||| |||||||
seq2  TGATTACGAGGCTG-CCTCACTCTCCGGCTCCAGCCAGTACC-CTAGAGA  98

seq1  AGGCCACACCCAGGCTTCTTGGCTTCTCTAGTAGCAGCCAGCCTACCGTG  148
      ||| ||||||||||||   |||||| ||||||||||||||| ||||||| 
seq2  AGG-CACACCCAGGCT--CTGGCTT-TCTAGTAGCAGCCAG-CTACCGT-  142

seq1  GCATACAGTTCACGAGCTGCCCTCTTAGATAGCAAGGTCCCTGCAGAAAA  198
      |||||||| ||| |||||| ||||||||||||||||||||||||||||||
seq2  GCATACAG-TCAAGAGCTG-CCTCTTAGATAGCAAGGTCCCTGCAGAAAA  190

seq1  ATGACATAATCATCTCAGAGATAGGAGAGGGCCACCAGAGGCAGGTGAGG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACATAATCATCTCAGAGATAGGAGAGGGCCACCAGAGGCAGGTGAGG  240

seq1  TAGAAGACCACCACAGAGGCTAGAGAATGGAATGTTCTAGGAGCTTCAAA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGACCACCACAGAGGCTAGAGAATGGAATGTTCTAGGAGCTTCAAA  290

seq1  ACTCACAACATGCCCAAGTTAGAG-CCAG-AAAGGGCAAGCTACAGGAGG  346
      |||||||||||||||||||||||| |||| ||||||||||||||||||||
seq2  ACTCACAACATGCCCAAGTTAGAGCCCAGAAAAGGGCAAGCTACAGGAGG  340

seq1  AGGGTGGGCGACATTTCTTTTGAAGGGAAAGGTAAGAGAACCATGGAGAA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTGGGCGACATTTCTTTTGAAGGGAAAGGTAAGAGAACCATGGAGAA  390

seq1  AGGAAACTCAAGTGGAGACCCTGGGGAGAGGCTATGGAAGGATGACACCA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAACTCAAGTGGAGACCCTGGGGAGAGGCTATGGAAGGATGACACCA  440

seq1  CTCAGAAAGGGTCTCAGGAAGAGAGCAATAGGTTGGAAAACAAGCCAAGC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAAAGGGTCTCAGGAAGAGAGCAATAGGTTGGAAAACAAGCCAAGC  490

seq1  AGATGCAGGAGCTAACAAAGCACTTGGCTCTTCAAGGATACTGTGTAGCA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCAGGAGCTAACAAAGCACTTGGCTCTTCAAGGATACTGTGTAGCA  540

seq1  CACTGGAGGAAAGCAGGCCTTAGGGCCAGAGGAGGTAAGATGAGGCAGGT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGAGGAAAGCAGGCCTTAGGGCCAGAGGAGGTAAGATGAGGCAGGT  590

seq1  GAGGAGGAAGGAAGACTCTGTGGAGCCAAGGCCAGAGGATGTAGGTAGGT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGGAAGGAAGACTCTGTGGAGCCAAGGCCAGAGGATGTAGGTAGGT  640

seq1  TGTCTCATCATGTCCTCATTTCCTTGTGGTGGTGACTAGAACAATCTTCA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCATCATGTCCTCATTTCCTTGTGGTGGTGACTAGAACAATCTTCA  690

seq1  ACAAGGAGGGCTGAGCAGACAGAGAGAACACAGAGGGAACACACCAGGTC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGAGGGCTGAGCAGACAGAGAGAACACAGAGGGAACACACCAGGTC  740

seq1  CCAGAAGACACAGAGCAACAGGCCCCAGCGCCAGGCCAACCTACAAGTAA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAGACACAGAGCAACAGGCCCCAGCGCCAGGCCAACCTACAAGTAA  790

seq1  AAAGAAGGACTGAGGGGAGCGTCCACCCAGACATTGCTTTCTTTATCAAG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAGGACTGAGGGGAGCGTCCACCCAGACATTGCTTTCTTTATCAAG  840

seq1  GTGGAGTGAGGTGATTGCTAAAATGAAATGAAGTTATAGAGTCAAGAGAG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGTGAGGTGATTGCTAAAATGAAATGAAGTTATAGAGTCAAGAGAG  890

seq1  ATACATAAAGGCAAAGAAAAGGCTTAGATGACCAGGCCCTTCCAATGCTC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATAAAGGCAAAGAAAAGGCTTAGATGACCAGGCCCTTCCAATGCTC  940

seq1  ATGTCAGGTTGCCTCACACCAGCCTAGGTGTACCATGCAGCTAGAACACC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCAGGTTGCCTCACACCAGCCTAGGTGTACCATGCAGCTAGAACACC  990

seq1  TCAGGCTGGCTTTCCCAACAATGCTCGGAAGCCAGGGCTGGAACAGAACA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCTGGCTTTCCCAACAATGCTCGGAAGCCAGGGCTGGAACAGAACA  1040

seq1  TGGTGGAATTC  1057
      |||||||||||
seq2  TGGTGGAATTC  1051