BAC Information

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BAC

Clone NameB6Ng01-005L05
Chromosome12 (Build37)
Map Location 43,262,106 - 43,262,583
singlet/doubletsinglet
Overlap genenone
Upstream geneImmp2l, EG638533
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-005L05.bB6Ng01-005L05.g
ACCDH842766DH842767
length469773
definitionDH842766|Mus musculus domesticus DNA, BAC clone: B6Ng01-005L05, 5' end.DH842767|Mus musculus domesticus DNA, BAC clone: B6Ng01-005L05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
cattgttcagtaggcataagccagaatgtgaagctaaatggtgcaaatat
aaaaaaagaaatccaatgtttccacaaatataggaatccaaaagtatctt
attgtccccatttcttcttcttcttcttcttcttcttcttcttcttcttc
ttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttctt
cttcttctttgaagtagattactccttttttttcaagatttatttattat
tatattaagtacactgtagctgtcttcagatgcaccagaagagggcatca
gatctcattacggatggttgtgagccaccatgtggttgctgggatttgaa
ctcaggaccagagcagtcggtgctcttaacttctgagccatctctccagc
ccacttcttctttgtataaggaacaaatcaccattatcttttgatctttt
cggtatgttgtctttgacc
gaattcatgaaattcttaggtccataaatggaactagaaaatatgattct
gagtgaggtaacacaatcacaaaagaacacacatggtatgtattctctga
taagtggatattagcccagtagctcagaatacctaagatacaattcacag
accacatgaagctcaagaagaatgaagagcaaaatatgcatacttccatc
cttcttagaagggggaacaaaatacccataggagaagatacagagacaaa
gtgtagagcagagactgaaagaaaggccatccagagactgctccacttga
ggatcgattccttatactgttaccaaacccaaacactattgtggatgcca
acaagtgctcactgataggagcctgataaagctgtctcctgagaggcgct
gccagtgcctgacaaatacagaggtggatgctctcagccaaccattggac
tgagcacaggttcccaaatacaggagctagagaaaggacccaaggagctg
aaggggtttacagccccataggaggaacaacaatatgagccaaccagtac
ccctagagctctcagggactaaacctccaaccagagagtacacatggagg
aacccatggctccagctgtctatgtaatagaggatggccttgtgggacat
cagtgagaggagagccccttggtcctgtgaagtcttgacactccagtgta
gggggatgccaggaaagggaagcagagtgggtaggttggtgagcaggggt
agaagagatgggatagggagttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_43262106_43262583
seq2: B6Ng01-005L05.b_48_522

seq1  GAATTCCATTGTTCAGTAGGCATAAGCCAGAATGTGAAGCTAAATGGTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTGTTCAGTAGGCATAAGCCAGAATGTGAAGCTAAATGGTGC  50

seq1  AAATATAAAAAAAGAAATCCAATGTTTCCACAAATATAGGAATCCAAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATAAAAAAAGAAATCCAATGTTTCCACAAATATAGGAATCCAAAAG  100

seq1  TATCTTATTGTCCCCATTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC  150
      |||||||||||||||||   ||||||||||||||||||||||||||||||
seq2  TATCTTATTGTCCCCAT---TTCTTCTTCTTCTTCTTCTTCTTCTTCTTC  147

seq1  TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT  197

seq1  CTTCTTCTTCTTCTTCTTTGAAGTAGATTACTCCTTTTTTTTCAAGATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTCTTCTTCTTCTTTGAAGTAGATTACTCCTTTTTTTTCAAGATTT  247

seq1  ATTTATTATTATATTAAGTACACTGTAGCTGTCTTCAGATGCACCAGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTATTATATTAAGTACACTGTAGCTGTCTTCAGATGCACCAGAAG  297

seq1  AGGGCATCAGATCTCATTACGGATGGTTGTGAGCCACCATGTGGTTGCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCATCAGATCTCATTACGGATGGTTGTGAGCCACCATGTGGTTGCTG  347

seq1  GGATTTGAACTCAGGACCAGAGCAGTCGGTGCTCTTAACTACTGAGCCAT  400
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GGATTTGAACTCAGGACCAGAGCAGTCGGTGCTCTTAACTTCTGAGCCAT  397

seq1  CTCTCCAGCCCACTTCTTCTTTGTATAAGGAACAAATCACCATTATCTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCAGCCCACTTCTTCTTTGTATAAGGAACAAATCACCATTATCTTT  447

seq1  TGATCTTTTCGGTATGTTGTCTTTGACC  478
      ||||||||||||||||||||||||||||
seq2  TGATCTTTTCGGTATGTTGTCTTTGACC  475