BAC Information

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BAC

Clone NameB6Ng01-006E16
Chromosome12 (Build37)
Map Location 18,946,259 - 18,947,326
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC673341, EG245297, LOC100042573, LOC668539, LOC100043324, LOC636282, EG632781, LOC668541, LOC673160, 5730507C01Rik, EG668553, LOC668558, LOC100042641, LOC668568
Downstream geneLOC668570, EG668413, LOC671401, EG546524, EG668584, EG544848, EG627871, LOC100042698, LOC629055, EG668588, LOC100042706, EG668594
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-006E16.bB6Ng01-006E16.g
ACCDH843193DH843194
length1,0601,186
definitionDH843193|Mus musculus domesticus DNA, BAC clone: B6Ng01-006E16, 5' end.DH843194|Mus musculus domesticus DNA, BAC clone: B6Ng01-006E16, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgagggccgggtgcttatctaagtcagcagagcatctggttaac
atttaacccaggtcagaagggagggagatagggagacacggggccagtca
ggacattcttttatgtctttcttatctttatggctagttggtttctggga
tgactttacagcctttgttctttgctctaagccccaaaagccctcctaac
tagcaagcccatgagtcatggaccttgaattttaattttctttcaccaga
acagtcacagtttcttcctgctttccaatctgataactccaacagagttt
gcagctccaagctggcctatctaatcaatgaactttgtgcttttctagtg
gggtgcaatctagaatgattgctgtgggctccctcttctcagaacaatgc
tcctgtcttctagtatcccatggtctacactcccatcctcacaaatcaat
ggctcttgaataaactacttggctccccagcttcagttttctcattgaaa
aatgaaggtttttttgttgggagacttcagtctctttccattaggagagc
cctgctttctcaagagctgctccaggcttgcattgaaggttaagaccagg
gctgtcaagcttcactcccaaaggaattgcctcaggagaggtgtaggaat
cgaagtgccacactccagtgctgtgatgctgtggcctggggtcaggccca
aggagctgcattccaggagacccaacctcaggcacattgctgcctctctg
gctactgaagactgacaagcctacaggccaggagatggcttgaagaacac
ccagaaccctcccaagatctgagcatgctcgtcagactggctggtcccat
gaaggacaagggttttgttttgctttgttttttcttttttgctccttcct
ctgaattcacagccaatgagctctttgttccaaagaagcagcatctaatt
tggctatggagtagtaaggagtttatttgtgagatctgggtgactccaat
ctcagagggacccagacagtcaggccctatgcagcaagaactccggttca
actatgtaca
gaattctcacccgaggaataccgaaaggctgagaaacacctgaaaaaatg
ttcaacatcctttaccatcagagaaatgcaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgttggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggtggttcctca
gaaaattggacatagtacaaccggaggatcccgcaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagtcagaagctggtaagaacccagat
gcccctcaacagaggaatggatacaaaaatgtggtacatttacacaatgg
aatactactcagctattaaaaagaatgaatttatgaaattcctaggcaaa
tggttggacctggagggcatcatcctgagtgaggtaacccaatcacaaaa
gaactcaaatgaaatgtactcactgataagtggatattagcccagaaact
tagtatagcgagatataaggtacaagatgcaaaacacatgaaactgaaga
agtccgaagaccaaagtgtggacactttgctccttcttagaattggaaac
aatcacccatggaaggagttacagagacaaagtttgggagctgcgacgaa
aggatggaccgtctagagactgccatatccagggatccatcacataatta
gcctccaaacgatgacaccattgcatacactagcaagcctttgttgcaag
gaccgtgatatagctgtccctttgtgagactaggccagggcctagcaaac
acagaagtggatgctcacagtcaactattggatggatcacagggtcccca
atggaggagctagagaaagtatccaaggagctaaagagatctgcatcctt
atcgggtggaacaacattatgaactatcagtaccccgaagcttcttgact
ctagctgcaattgtattaagatgtcctagttgggccatcactgtaaagag
agcctcattggttcaggccattcttttattggcctcggtgactagggtat
gccagtgtcccaaaatggggaaggtgtggaggtgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_18946259_18947326
seq2: B6Ng01-006E16.b_48_1107 (reverse)

seq1  TGTACATAGTTGACACGGGGTTCTTGCTGCATAGTGCCTGACCTAGTCTG  50
      |||||||||||||  ||| ||||||||||||||| |||||||   |||||
seq2  TGTACATAGTTGAACCGGAGTTCTTGCTGCATAGGGCCTGAC--TGTCTG  48

seq1  GGTCCCTCTGGAGATCTGGGAGTCACCCAGATCTCACAAATAAACTCCCT  100
      ||||||||| ||||  | |||||||||||||||||||||||||||| |||
seq2  GGTCCCTCT-GAGA--TTGGAGTCACCCAGATCTCACAAATAAACT-CCT  94

seq1  TACTACTTCCATTAGCCAAATTAGATGCTGCTTCTTTGGAACAAAGAGCT  150
      |||||| |||| ||||||||||||||||||||||||||||||||||||||
seq2  TACTAC-TCCA-TAGCCAAATTAGATGCTGCTTCTTTGGAACAAAGAGCT  142

seq1  CATTGGCTGTGAATTCAGAGGAAGGAGCAAAAAAGAAAAAACAAAGCAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGGCTGTGAATTCAGAGGAAGGAGCAAAAAAGAAAAAACAAAGCAAA  192

seq1  ACAAAACCCTTGTCCTTCATGGGACCAGCCAGTCTGACGAGCATGCTCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACCCTTGTCCTTCATGGGACCAGCCAGTCTGACGAGCATGCTCAG  242

seq1  ATCTTGGGAGGGTTCTGGGTGTTCTTCAAGCCATCTCCTGGCCTGTAGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGGGAGGGTTCTGGGTGTTCTTCAAGCCATCTCCTGGCCTGTAGGC  292

seq1  TTGTCAGTCTTCAGTAGCCAGAGAGGCAGCAATGTGCCTGAGGTTGGGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCAGTCTTCAGTAGCCAGAGAGGCAGCAATGTGCCTGAGGTTGGGTC  342

seq1  TCCTGGAATGCAGCTCCTTGGGCCTGACCCCAGGCCACAGCATCACAGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGAATGCAGCTCCTTGGGCCTGACCCCAGGCCACAGCATCACAGCA  392

seq1  CTGGAGTGTGGCACTTCGATTCCTACACCTCTCCTGAGGCAATTCCTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGTGTGGCACTTCGATTCCTACACCTCTCCTGAGGCAATTCCTTTG  442

seq1  GGAGTGAAGCTTGACAGCCCTGGTCTTAACCTTCAATGCAAGCCTGGAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTGAAGCTTGACAGCCCTGGTCTTAACCTTCAATGCAAGCCTGGAGC  492

seq1  AGCTCTTGAGAAAGCAGGGCTCTCCTAATGGAAAGAGACTGAAGTCTCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTTGAGAAAGCAGGGCTCTCCTAATGGAAAGAGACTGAAGTCTCCC  542

seq1  AACAAAAAAACCTTCATTTTTCAATGAGAAAACTGAAGCTGGGGAGCCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAAAAACCTTCATTTTTCAATGAGAAAACTGAAGCTGGGGAGCCAA  592

seq1  GTAGTTTATTCAAGAGCCATTGATTTGTGAGGATGGGAGTGTAGACCATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTTTATTCAAGAGCCATTGATTTGTGAGGATGGGAGTGTAGACCATG  642

seq1  GGATACTAGAAGACAGGAGCATTGTTCTGAGAAGAGGGAGCCCACAGCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATACTAGAAGACAGGAGCATTGTTCTGAGAAGAGGGAGCCCACAGCAA  692

seq1  TCATTCTAGATTGCACCCCACTAGAAAAGCACAAAGTTCATTGATTAGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCTAGATTGCACCCCACTAGAAAAGCACAAAGTTCATTGATTAGAT  742

seq1  AGGCCAGCTTGGAGCTGCAAACTCTGTTGGAGTTATCAGATTGGAAAGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCAGCTTGGAGCTGCAAACTCTGTTGGAGTTATCAGATTGGAAAGCA  792

seq1  GGAAGAAACTGTGACTGTTCTGGTGAAAGAAAATTAAAATTCAAGGTCCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAAACTGTGACTGTTCTGGTGAAAGAAAATTAAAATTCAAGGTCCA  842

seq1  TGACTCATGGGCTTGCTAGTTAGGAGGGCTTTTGGGGCTTAGAGCAAAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCATGGGCTTGCTAGTTAGGAGGGCTTTTGGGGCTTAGAGCAAAGA  892

seq1  ACAAAGGCTGTAAAGTCATCCCAGAAACCAACTAGCCATAAAGATAAGAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGGCTGTAAAGTCATCCCAGAAACCAACTAGCCATAAAGATAAGAA  942

seq1  AGACATAAAAGAATGTCCTGACTGGCCCCGTGTCTCCCTATCTCCCTCCC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATAAAAGAATGTCCTGACTGGCCCCGTGTCTCCCTATCTCCCTCCC  992

seq1  TTCTGACCTGGGTTAAATGTTAACCAGATGCTCTGCTGACTTAGATAAGC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGACCTGGGTTAAATGTTAACCAGATGCTCTGCTGACTTAGATAAGC  1042

seq1  ACCCGGCCCTCAGAATTC  1068
      ||||||||||||||||||
seq2  ACCCGGCCCTCAGAATTC  1060