BAC Information

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BAC

Clone NameB6Ng01-006K21
Chromosome12 (Build37)
Map Location 83,032,058 - 83,155,505
singlet/doubletdoublet
Overlap genePcnx
Upstream geneSfrs5, Slc10a1, Smoc1, Slc8a3, LOC100042143, LOC100042148, EG214321, Hspe1-ps2, Adam4, 1810020G14Rik, Synj2bp, Adam21, Med6, Ttc9, LOC100041821, Map3k9
Downstream geneSipa1l1, LOC432675, EG666911, Rgs6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-006K21.bB6Ng01-006K21.g
ACCDH843472DH843473
length4201,105
definitionDH843472|Mus musculus domesticus DNA, BAC clone: B6Ng01-006K21, 5' end.DH843473|Mus musculus domesticus DNA, BAC clone: B6Ng01-006K21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(83,155,080 - 83,155,505)(83,032,058 - 83,033,170)
sequence
caaagaatttgctgggtgtagtgacccctgcctattgtcctagcatcaga
aaactaaaagcatgaggattttgagttcaagtttaacctgaggtatatag
tgagtcactatttgaaaaaaaaggaaattaaactatagatagaaagatag
atagatagatagatagatgcatgcataaatacattcatagattcattgat
agatggtagatagatagacagatagatagatgataggtagatagatggta
gatagatagatagatagatagacagacgatagataggtagatagctagat
ggtagataggtagatagataggtaggtaggtagatagatagatagatgga
tggataggtagatttactgctcgatcgatggatagatagtcagttagttg
aacgatagttgttaggtaat
gaattcatcattttttttatatatatactcaggacatttttttcctctgg
aacctgtatattctttggcatactggaataatactcttaggacttacatt
ttagttggagagatactaaggtaactgacaatgtgaggtagaattgccag
gcaccattttggtgtatagaggaggagatggccaagaccagctgtatgtc
tgtcatttaaattgggaatgtttgtcagtgtgcttactttccagcccata
atgacagacttagatttccttttactgtgtgataaaatatttactactct
gaaaagaaagaaagaaagaaaggaaggaaggaaggaaggaagaaagaaag
agagaaaggaaagaaagaaaggaaaggaaaaaggaaagaagaaagaaaaa
ttatattcacaccatactcatgcctgttaaactagttagtatcccctttg
gggatgtgattattggccatttgtgctaaaaagccagcttttcctgttgc
tgatgaaggttttgaaagcaggaagtaaggagtataatgtttattactgt
ctttaggtctttaagactccatagctagagtaatagattttgactaattt
ccttcatttatttgggagttgacttccatgcactgcttaatattttgaaa
acattgagtatatttggatagacattgtgcattggtagtttgatgactag
gatattctctctcagatctgttcacattaaaatatgatctttcttatgac
tttaagtgaaaaaaaactgatagaaaatttttgagtacaaattttctggt
tgagttcattttgatgaggctcatggataagtttagattgcttctgatga
agagggacacatcagtcatatatggaaaataaaagctatttaattaacaa
gatcgtctttttttcttctttaaatttgtagtgctggagtgcccccgtgg
cttaacacgtcggcaaaggctctgcactgagctgcgttacaggctcttgt
gaccttccttgactagtagctgctggggaaaatactcgagaacctgctag
gtggctaatgccattggaacaggacagaacgcgccagctcgcttcttaga
ccgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_83155080_83155505
seq2: B6Ng01-006K21.b_49_474 (reverse)

seq1  ATTACCTAACTACTATCTATCATCTATCTATCTATCTATCTATCTATCTA  50
      |||||||||| ||||||  ||| ||| ||  ||||||||| ||| ||| |
seq2  ATTACCTAACAACTATCGTTCAACTAACTGACTATCTATCCATCGATCGA  50

seq1  TCTATCTATCTACCTATCCATCCATCTATCTATCTATCTACCTACCTACC  100
       |  |  |||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTAAATCTACCTATCCATCCATCTATCTATCTATCTACCTACCTACC  100

seq1  TATCTATCTACCTATCTACCATCTAGCTATCTACCTATCTATCGTCTGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTATCTACCTATCTACCATCTAGCTATCTACCTATCTATCGTCTGTC  150

seq1  TATCTATCTATCTATCTATCTACCATCTATCTACCTATCATCTATCTATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTATCTATCTATCTATCTACCATCTATCTACCTATCATCTATCTATC  200

seq1  TGTCTATCTATCTACCATCTATCAATGAATCTATGAATGTATTTATGCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTATCTATCTACCATCTATCAATGAATCTATGAATGTATTTATGCAT  250

seq1  GCATCTATCTATCTATCTATCTATCTTTCTATCTATAGTTTAATTTCCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTATCTATCTATCTATCTATCTTTCTATCTATAGTTTAATTTCCTT  300

seq1  TTTTTTCAAATAGTGACTCACTATATACCTCAGGTTAAACTTGAACTCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCAAATAGTGACTCACTATATACCTCAGGTTAAACTTGAACTCAA  350

seq1  AATCCTCATGCTTTTAGTTTTCTGATGCTAGGACAATAGGCAGGGGTCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTCATGCTTTTAGTTTTCTGATGCTAGGACAATAGGCAGGGGTCAC  400

seq1  TACACCCAGCAAATTCTTTGGAATTC  426
      ||||||||||||||||||||||||||
seq2  TACACCCAGCAAATTCTTTGGAATTC  426

seq1: chr12_83032058_83033170
seq2: B6Ng01-006K21.g_67_1171

seq1  GAATTCATCATTTTTTTTATATATATACTCAGGACATTTTTTTCCTCTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCATTTTTTTTATATATATACTCAGGACATTTTTTTCCTCTGG  50

seq1  AACCTGTATATTCTTTGGCATACTGGAATAATACTCTTAGGACTTACATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGTATATTCTTTGGCATACTGGAATAATACTCTTAGGACTTACATT  100

seq1  TTAGTTGGAGAGATACTAAGGTAACTGACAATGTGAGGTAGAATTGCCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTGGAGAGATACTAAGGTAACTGACAATGTGAGGTAGAATTGCCAG  150

seq1  GCACCATTTTGGTGTATAGAGGAGGAGATGGCCAAGACCAGCTGTATGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCATTTTGGTGTATAGAGGAGGAGATGGCCAAGACCAGCTGTATGTC  200

seq1  TGTCATTTAAATTGGGAATGTTTGTCAGTGTGCTTACTTTCCAGCCCATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATTTAAATTGGGAATGTTTGTCAGTGTGCTTACTTTCCAGCCCATA  250

seq1  ATGACAGACTTAGATTTCCTTTTACTGTGTGATAAAATATTTACTACTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACAGACTTAGATTTCCTTTTACTGTGTGATAAAATATTTACTACTCT  300

seq1  GAAAAGAAAGAAAGAAAGAAAGGAAGGAAGGAAGGAAGGAAGAAAGAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGAAAGAAAGAAAGAAAGGAAGGAAGGAAGGAAGGAAGAAAGAAAG  350

seq1  AGAGAAAGGAAAGAAAGAAAGGAAAGGAAAAAGGAAAGAAGAAAGAAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAAGGAAAGAAAGAAAGGAAAGGAAAAAGGAAAGAAGAAAGAAAAA  400

seq1  TTATATTCACACCATACTCATGCCTGTTAAACTAGTTAGTATCCCCTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTCACACCATACTCATGCCTGTTAAACTAGTTAGTATCCCCTTTG  450

seq1  GGGATGTGATTATTGGCCATTTGTGCTAAAAAGCCAGCTTTTCCTGTTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGTGATTATTGGCCATTTGTGCTAAAAAGCCAGCTTTTCCTGTTGC  500

seq1  TGATGAAGGTTTTGAAAGCAGGAAGTAAGGAGTATAATGTTTATTACTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGAAGGTTTTGAAAGCAGGAAGTAAGGAGTATAATGTTTATTACTGT  550

seq1  CTTTAGGTCTTTAAGACTCCATAGCTAGAGTAATAGATTTTGACTAATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGGTCTTTAAGACTCCATAGCTAGAGTAATAGATTTTGACTAATTT  600

seq1  CCTTCATTTATTTGGGAGTTGACTTCCATGCACTGCTTAATATTTTGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCATTTATTTGGGAGTTGACTTCCATGCACTGCTTAATATTTTGAAA  650

seq1  ACATTGAGTATATTTGGATAGACATTGTGCATTGGTAGTTTGATGACTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGAGTATATTTGGATAGACATTGTGCATTGGTAGTTTGATGACTAG  700

seq1  GATATTCTCTCTCAGATCTGTTCACATTAAAATATGATCTTTCTTATGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTCTCTCTCAGATCTGTTCACATTAAAATATGATCTTTCTTATGAC  750

seq1  TTTAAGTGAAAAAAAACTGATAGAAAATTTTTGAGTACAAATTTTCTGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGTGAAAAAAAACTGATAGAAAATTTTTGAGTACAAATTTTCTGGT  800

seq1  TGAGTTCATTTTGATGAGGCTCATGGATAAGTTTAGATTGCTTCTGATGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTCATTTTGATGAGGCTCATGGATAAGTTTAGATTGCTTCTGATGA  850

seq1  AGAGGGACACATCAGTCATATATGGAAAATAAAAGCTATTTAATTAACAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGACACATCAGTCATATATGGAAAATAAAAGCTATTTAATTAACAA  900

seq1  GATCGTCTTTTTTTCTTCTTTAAATTTGTAGTGCTGGAGGTGCCCCCGTG  950
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GATCGTCTTTTTTTCTTCTTTAAATTTGTAGTGCTGGA-GTGCCCCCGTG  949

seq1  GCTTAACACGTCGGCAAAGGCTCTGCCACTGAGCTGCGTTACCAGGCTCT  1000
      ||||||||||||||||||||||||| ||||||||||||||| ||||||||
seq2  GCTTAACACGTCGGCAAAGGCTCTG-CACTGAGCTGCGTTA-CAGGCTCT  997

seq1  TGTGACCCTCCCTTGACTAGTAGCTGCT-GGGAAAATACTCGAAGGAAAC  1049
      ||||| ||| |||||||||||||||||| ||||||||||||||  ||| |
seq2  TGTGA-CCTTCCTTGACTAGTAGCTGCTGGGGAAAATACTCGA--GAACC  1044

seq1  TGCTAAGTGGCTAATGCCAGTGTGAACAAGAACCAGAACGCGCAGGCTCG  1099
      ||||| ||||||||||||| || ||||| ||  ||||||||||  |||||
seq2  TGCTAGGTGGCTAATGCCATTG-GAACAGGA--CAGAACGCGCCAGCTCG  1091

seq1  CTTCTTAGAACGTG  1113
      ||||||||| ||||
seq2  CTTCTTAGACCGTG  1105