BAC Information

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BAC

Clone NameB6Ng01-008A06
Chromosome12 (Build37)
Map Location 72,671,695 - 72,764,244
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100041061, Frmd6, Actr10, Psma3, 3110056K07Rik, Arid4a, Timm9, LOC100041035, 2700049A03Rik, LOC666162, Dact1, LOC100041190
Downstream geneDaam1, LOC666213, LOC666220, Gpr135, LOC100041239, 2810055F11Rik, 1200003C05Rik, 4930403N07Rik, Rtn1, Lrrc9, 1810048J11Rik, LOC209183, LOC100041323, Dhrs7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-008A06.bB6Ng01-008A06.g
ACCDH844419DH844420
length4831,086
definitionDH844419|Mus musculus domesticus DNA, BAC clone: B6Ng01-008A06, 5' end.DH844420|Mus musculus domesticus DNA, BAC clone: B6Ng01-008A06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(72,763,762 - 72,764,244)(72,671,695 - 72,672,793)
sequence
gaattctctattgaaaaatgatgcctttattaaaatagcagaccaaatgt
agactcacgggcctgtctgagcaagaataaggcagaatctgcatttccac
tgaggccagggctgaacagctgggccacaccaaagttaattaacattttt
ttcttctagatggctagaagaattaaatatctagagaaactagtttcaac
agactatagaaacagcttttcttaaatttcaaagttacataagaagtttg
agaaagagaaagtacccaaggagctaaaggggtttgcaactctataggtg
gaacaacaatatgaactaatcagttcccccagagctcgtgtctctagctg
catatgtagcagaagatggcctagtcggccatcattgggaagagaggccc
attggacttgcaaactttatatgccccagtacaggggaacaccagggcca
agaagtgggagtgggtgggtaggggagcaggga
gaattctcattcacttctcaaagaacaatcacttaattctttgcctaaaa
ctctgatggcacaattgtaccagcgaagaggggttctctctcattggctt
ttctgcaagcattggccaggggtctgaggctcatgggccatccagctgtt
ccagctggtcatttcttcagtagcagaaatatcctcaatagactctgtcg
actctgttgattgtctttctattcctctgttcagccctggcttgggtggg
ttttctctgctggaaggcttggtggtgcacagaaaagtctcagagactga
ggtagtggaaagagccaggcacctaagggaaaatcctgacacacatatga
aggctatttcttttctagctcatgttgtatatctaatgtttactgacagg
ctaattctctactcttactttatctctgccttgcctggagcaggctactg
cgtgtatgaaaacatttcatttctgttattttacttcgttcgttccatat
ttgttcttagagtcttcacctctccttgctaggcctgtcatcatgtatcc
ttgactgccttaagcaggtttttttctcaaaaatatatttgaggaactga
gacatagatcagttggtagtgtactcgctcagcatacgtggccttgggtt
tgatccccaacatcacataaactggatgtggtcacacacgccttaaattg
gatgtggtcttacaggcttatcacctcaccacctgggaggcaaaggaagg
agggtcacaagttcaaggtcatgttcatctagttagaggccatcctgggc
tacatgaggccctttctcacccatataggcataaatagagatagatagat
atagatagacagacttgattataaaagcccattgtcttaaatttataagt
agatcaattttgctatacaaagtatccccccgcctagctcctgaaagagc
attcatgtaaaatagtgagatcacagcacagttgttttcttgaattgttc
atatcatgaaaatatctttgaaaagcaatgttatgttccaagtgttgcat
ccctctgttgtaagatctcactgtagtctttcatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_72763762_72764244
seq2: B6Ng01-008A06.b_30_512 (reverse)

seq1  TCCCTGCTCCCCTACCCACCCACTCCCACTTCTTGGCCCTGGTGTTCCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGCTCCCCTACCCACCCACTCCCACTTCTTGGCCCTGGTGTTCCCC  50

seq1  TGTACTGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCTTCCCAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCTTCCCAAT  100

seq1  GATGGCCGACTAGGCCATCTTCTGCTACATATGCAGCTAGAGACACGAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCCGACTAGGCCATCTTCTGCTACATATGCAGCTAGAGACACGAGC  150

seq1  TCTGGGGGAACTGATTAGTTCATATTGTTGTTCCACCTATAGAGTTGCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGGGAACTGATTAGTTCATATTGTTGTTCCACCTATAGAGTTGCAA  200

seq1  ACCCCTTTAGCTCCTTGGGTACTTTCTCTTTCTCAAACTTCTTATGTAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCTTTAGCTCCTTGGGTACTTTCTCTTTCTCAAACTTCTTATGTAAC  250

seq1  TTTGAAATTTAAGAAAAGCTGTTTCTATAGTCTGTTGAAACTAGTTTCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAATTTAAGAAAAGCTGTTTCTATAGTCTGTTGAAACTAGTTTCTC  300

seq1  TAGATATTTAATTCTTCTAGCCATCTAGAAGAAAAAAATGTTAATTAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATATTTAATTCTTCTAGCCATCTAGAAGAAAAAAATGTTAATTAACT  350

seq1  TTGGTGTGGCCCAGCTGTTCAGCCCTGGCCTCAGTGGAAATGCAGATTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGTGGCCCAGCTGTTCAGCCCTGGCCTCAGTGGAAATGCAGATTCT  400

seq1  GCCTTATTCTTGCTCAGACAGGCCCGTGAGTCTACATTTGGTCTGCTATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTATTCTTGCTCAGACAGGCCCGTGAGTCTACATTTGGTCTGCTATT  450

seq1  TTAATAAAGGCATCATTTTTCAATAGAGAATTC  483
      |||||||||||||||||||||||||||||||||
seq2  TTAATAAAGGCATCATTTTTCAATAGAGAATTC  483

seq1: chr12_72671695_72672793
seq2: B6Ng01-008A06.g_66_1151

seq1  GAATTCTCATTCACTTCTCAAAGAACAATCACTTAATTCTTTGCCTAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATTCACTTCTCAAAGAACAATCACTTAATTCTTTGCCTAAAA  50

seq1  CTCTGATGGCACAATTGTACCAGCGAAGAGGGGTTCTCTCTCATTGGCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGATGGCACAATTGTACCAGCGAAGAGGGGTTCTCTCTCATTGGCTT  100

seq1  TTCTGCAAGCATTGGCCAGGGGTCTGAGGCTCATGGGCCATCCAGCTGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCAAGCATTGGCCAGGGGTCTGAGGCTCATGGGCCATCCAGCTGTT  150

seq1  CCAGCTGGTCATTTCTTCAGTAGCAGAAATATCCTCAATAGACTCTGTCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTGGTCATTTCTTCAGTAGCAGAAATATCCTCAATAGACTCTGTCG  200

seq1  ACTCTGTTGATTGTCTTTCTATTCCTCTGTTCAGCCCTGGCTTGGGTGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGTTGATTGTCTTTCTATTCCTCTGTTCAGCCCTGGCTTGGGTGGG  250

seq1  TTTTCTCTGCTGGAAGGCTTGGTGGTGCACAGAAAAGTCTCAGAGACTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCTGCTGGAAGGCTTGGTGGTGCACAGAAAAGTCTCAGAGACTGA  300

seq1  GGTAGTGGAAAGAGCCAGGCACCTAAGGGAAAATCCTGACACACATATGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGTGGAAAGAGCCAGGCACCTAAGGGAAAATCCTGACACACATATGA  350

seq1  AGGCTATTTCTTTTCTAGCTCATGTTGTATATCTAATGTTTACTGACAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTATTTCTTTTCTAGCTCATGTTGTATATCTAATGTTTACTGACAGG  400

seq1  CTAATTCTCTACTCTTACTTTATCTCTGCCTTGCCTGGAGCAGGCTACTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTCTCTACTCTTACTTTATCTCTGCCTTGCCTGGAGCAGGCTACTG  450

seq1  CGTGTATGAAAACATTTCATTTCTGTTATTTTACTTCGTTCGTTCCATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTATGAAAACATTTCATTTCTGTTATTTTACTTCGTTCGTTCCATAT  500

seq1  TTGTTCTTAGAGTCTTCACCTCTCCTTGCTAGGCCTGTCATCATGTATCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCTTAGAGTCTTCACCTCTCCTTGCTAGGCCTGTCATCATGTATCC  550

seq1  TTGACTGCCTTAAGCAGGTTTTTTTCTCAAAAATATATTTGAGGAACTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTGCCTTAAGCAGGTTTTTTTCTCAAAAATATATTTGAGGAACTGA  600

seq1  GACATAGATCAGTTGGTAGTGTACTCGCTCAGCATACGTGGCCTTGGGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATAGATCAGTTGGTAGTGTACTCGCTCAGCATACGTGGCCTTGGGTT  650

seq1  TGATCCCCAACATCACATAAACTGGATGTGGTCACACACGCCTTAAATTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCCCCAACATCACATAAACTGGATGTGGTCACACACGCCTTAAATTG  700

seq1  GATGTGGTCTTACAGGCTTATCACCTCACCACCTGGGAGGCAAAGGAAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGGTCTTACAGGCTTATCACCTCACCACCTGGGAGGCAAAGGAAGG  750

seq1  AGGGTCACAAGTTCAAGGTCATGTTCATCTAGTTAGAGGCCATCCTGGGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTCACAAGTTCAAGGTCATGTTCATCTAGTTAGAGGCCATCCTGGGC  800

seq1  TACATGAGGCCCTTTCTCACCCATATAGGCATAAATAGAGATAGATAGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGAGGCCCTTTCTCACCCATATAGGCATAAATAGAGATAGATAGAT  850

seq1  ATAGATAGACAGACTTGATTATAAAAGCCCATTGTCTTAAATTTATAAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATAGACAGACTTGATTATAAAAGCCCATTGTCTTAAATTTATAAGT  900

seq1  AGATCAATTTTGCTTATACAAAGTATCCCCCCCGCCTAGCTCCTGAAGGA  950
      ||||||||||||| |||||||||||| |||||||||||||||||||| ||
seq2  AGATCAATTTTGC-TATACAAAGTAT-CCCCCCGCCTAGCTCCTGAAAGA  948

seq1  GCATTCATGTAAAAATAGTGAGATCACAGCACAGTTGTTTTCTTGAATTT  1000
      |||||||||| |||||||||||||||||||||||||||||||||||| ||
seq2  GCATTCATGT-AAAATAGTGAGATCACAGCACAGTTGTTTTCTTGAA-TT  996

seq1  GTTTCAATATCAATGAAAAATATCTTTGAAAAGCAATGTTATGTTCCAAG  1050
      |||   ||||| ||| ||||||||||||||||||||||||||||||||||
seq2  GTT--CATATC-ATG-AAAATATCTTTGAAAAGCAATGTTATGTTCCAAG  1042

seq1  TTGTTTGCATCTCTCTGTTGTAAGATCTCACTGTTAGTCTTTATCATCT  1099
      |   ||||||| ||||||||||||||||||||| |||||||  ||||||
seq2  T--GTTGCATCCCTCTGTTGTAAGATCTCACTG-TAGTCTT--TCATCT  1086