BAC Information

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BAC

Clone NameB6Ng01-009N23
Chromosome12 (Build37)
Map Location 81,900,050 - 81,989,862
singlet/doubletdoublet
Overlap gene4933426M11Rik
Upstream geneRad51l1, LOC100041968, LOC435309, LOC100041674, LOC666754, Zfp36l1, Actn1, Wdr22, Exdl2, 2310002D06Rik, Galntl1, LOC100041715, Erh, Slc39a9, 3830431G21Rik, Gm1568
Downstream geneSfrs5, Slc10a1, Smoc1, Slc8a3, LOC100042143, LOC100042148, EG214321, Hspe1-ps2, Adam4, 1810020G14Rik, Synj2bp, Adam21, Med6, Ttc9, LOC100041821, Map3k9, Pcnx
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-009N23.bB6Ng01-009N23.g
ACCDH845699DH845700
length802301
definitionDH845699|Mus musculus domesticus DNA, BAC clone: B6Ng01-009N23, 5' end.DH845700|Mus musculus domesticus DNA, BAC clone: B6Ng01-009N23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(81,989,291 - 81,989,862)(81,900,050 - 81,900,356)
sequence
gaattcaccttgtctaccccattgcagtctggcactgtaaggctcctgcc
attttcttcttttcttcttgttgttttgttttgttttttgtttttaaaaa
gatttatttatttattttatgtatatgagtacactatagatgtatagatg
gttgtgagccaccatgtggttgctgggatttgaactcaggacttttggaa
gagcagtcagcgctcttaaccactgagccatctccagcgccgtttttgtt
ttgtttttgttttttgtttgttttttcctaaagggatcttcctaaatacc
cagctaggtgattctcctcagcgcatgatgcttccttttgtttgagactt
ggtagccaaggctgaccttgatttgctatgcaccagagaatgaccctcaa
ttatttttttttttttttttttttagacagggtcttgcctggaactcaca
tttagaccagactggcttggaactcatagaggtcgatctgcctctggctc
cagaatgctggggttaaagccatgaaccatcaaagccagcaccattcagg
agctttctatgcacgcatgtgcaccacctgcatgcgtgatgcccagtgga
gatcagacaaaggcattagattctgcggaactggagttatggtgggctgt
gagtcaccatgagtgatgggagctgaatccgggtcttctgcaagagcaac
aaatacttttaactgctagtgctctctccaacccaagatttttttttttt
aaattgtgtctgtggaggaaaaaaaaggggggggggcggtgaggacgagt
gt
tcagagattcacttgtctatttttttaaagatttatttatttattttatg
tatatgagtgctctattttcatgaacatcaacagtgggaatcagattctg
ttatagatggttgtgagccattatgtggttgctgggaattgaggttagga
acctctggaagagcaaccaaagcacttaaatctctgagccatctcttcag
cccccgcctatctttctttttctctctctctccttccttccttccttcct
tccttccttccttccttccttccctccctccctccctccctccctccctc
c
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_81989291_81989862
seq2: B6Ng01-009N23.b_48_619 (reverse)

seq1  GCACATGCGTGCATAGAAAGCTCCTGAATGGTGCTGGCTTTGATGGTTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATGCGTGCATAGAAAGCTCCTGAATGGTGCTGGCTTTGATGGTTCA  50

seq1  TGGCTTTAACCCCAGCATTCTGGAGCCAGAGGCAGATCGACCTCTATGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTTAACCCCAGCATTCTGGAGCCAGAGGCAGATCGACCTCTATGAG  100

seq1  TTCCAAGCCAGTCTGGTCTAAATGTGAGTTCCAGGCAAGACCCTGTCTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAAGCCAGTCTGGTCTAAATGTGAGTTCCAGGCAAGACCCTGTCTAA  150

seq1  AAAAAAAAAAAAAAAAAAATAATTGAGGGTCATTCTCTGGTGCATAGCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAAAAAAATAATTGAGGGTCATTCTCTGGTGCATAGCAA  200

seq1  ATCAAGGTCAGCCTTGGCTACCAAGTCTCAAACAAAAGGAAGCATCATGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGGTCAGCCTTGGCTACCAAGTCTCAAACAAAAGGAAGCATCATGC  250

seq1  GCTGAGGAGAATCACCTAGCTGGGTATTTAGGAAGATCCCTTTAGGAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGGAGAATCACCTAGCTGGGTATTTAGGAAGATCCCTTTAGGAAAA  300

seq1  AACAAACAAAAAACAAAAACAAAACAAAAACGGCGCTGGAGATGGCTCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAACAAAAAACAAAAACAAAACAAAAACGGCGCTGGAGATGGCTCAG  350

seq1  TGGTTAAGAGCGCTGACTGCTCTTCCAAAAGTCCTGAGTTCAAATCCCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTAAGAGCGCTGACTGCTCTTCCAAAAGTCCTGAGTTCAAATCCCAG  400

seq1  CAACCACATGGTGGCTCACAACCATCTATACATCTATAGTGTACTCATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCACATGGTGGCTCACAACCATCTATACATCTATAGTGTACTCATAT  450

seq1  ACATAAAATAAATAAATAAATCTTTTTAAAAACAAAAAACAAAACAAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAAATAAATAAATAAATCTTTTTAAAAACAAAAAACAAAACAAAAC  500

seq1  AACAAGAAGAAAAGAAGAAAATGGCAGGAGCCTTACAGTGCCAGACTGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGAAGAAAAGAAGAAAATGGCAGGAGCCTTACAGTGCCAGACTGCA  550

seq1  ATGGGGTAGACAAGGTGAATTC  572
      ||||||||||||||||||||||
seq2  ATGGGGTAGACAAGGTGAATTC  572

seq1: chr12_81900050_81900356
seq2: B6Ng01-009N23.g_70_376

seq1  GAATTCTCAGAGATTCACTTGTCTATTTTTTTAAAGATTTATTTATTTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGAGATTCACTTGTCTATTTTTTTAAAGATTTATTTATTTAT  50

seq1  TTTATGTATATGAGTGCTCTATTTTCATGAACATCAACAGTGGGAATCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGTATATGAGTGCTCTATTTTCATGAACATCAACAGTGGGAATCAG  100

seq1  ATTCTGTTATAGATGGTTGTGAGCCATTATGTGGTTGCTGGGAATTGAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGTTATAGATGGTTGTGAGCCATTATGTGGTTGCTGGGAATTGAGG  150

seq1  TTAGGAACCTCTGGAAGAGCAACCAAAGCACTTAAATCTCTGAGCCATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGAACCTCTGGAAGAGCAACCAAAGCACTTAAATCTCTGAGCCATCT  200

seq1  CTTCAGCCCCCGCCTATCTTTCTTTTTCTCTCTCTCTCCTTCCTTCCTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGCCCCCGCCTATCTTTCTTTTTCTCTCTCTCTCCTTCCTTCCTTC  250

seq1  CTTCCTTCCTTCCTTCCTTCCTTCCTTCCCTCCCTCCCTCCCTCCCTCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTCCTTCCTTCCTTCCTTCCTTCCCTCCCTCCCTCCCTCCCTCCC  300

seq1  TCCCTCC  307
      |||||||
seq2  TCCCTCC  307