BAC Information

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BAC

Clone NameB6Ng01-010K12
Chromosome12 (Build37)
Map Location 28,224,769 - 28,225,841
singlet/doubletsinglet
Overlap genenone
Upstream gene1700020D12Rik, Sox11
Downstream geneLOC100043009, LOC669327, 1110015M06Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-010K12.bB6Ng01-010K12.g
ACCDH846261DH846262
length1,0551,145
definitionDH846261|Mus musculus domesticus DNA, BAC clone: B6Ng01-010K12, 5' end.DH846262|Mus musculus domesticus DNA, BAC clone: B6Ng01-010K12, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattacctctgataatctgatacagcctacactaagcataaaccc
acaaaggccaccaaacttcttacctcctaacaaagcttatctcagtctct
caatctccccttttccccattgactccaattgctgcccatacaaccctgg
gtgttgggtcatctaatggagtgtggtgccacagtcttaaagaaaaccga
ccctccctcagagccatcatcagtagctccttggctaaagctgggggctc
atgggcttctccttccatgctggaagttcttgaactggcttgatcttgtg
caggcagccaccgctactgggaacttgtgggtgcagtggttctgtcattg
tctagaagatactgctttgctctgactatccccaatctccagcttttata
atcgtttcaccttttcttttgtaatgatcctctgagtgggaccctcatgc
ttggggagggtatgtacaaaatccatctctgtaagtttgtcataaaaatc
agacagaaagcaaaggaaacaactgtttgtatcagccattgctattttat
tcctaattgctggaattaagtatcctccagcaagagcagctgagcgtgaa
atacctttcagcattactgatacaaaatcacgtgaaagatacagggacct
aactgctgtttgtaggcaggaggcagaaggatggcttaacatctcaagtt
gcatcatcaccatacaaagaacagagtgaagtccacttggaccctccact
cccccacatccccaccaatttttcttaaagaccgttggctcatatttagc
catttccttgtccaaggaagaagttggtaatgccatggtaaactttgtgt
ttcacatccaagactagcaacgggaaagtgatcagatgagcaagcttgga
gccgactgtgaactgaaccttaaagtcgtagccatagtgcactttcgtga
tctgttacatcactcatttcaggatttgtctctgagtcaccctctcagaa
tgctatagagtatgagtggtgattaagcatctcttctcgaataaaatagt
agtcc
gaattctcacctgaggaatacctaatggctgagaagcacctgaaaaaatg
ttcaacatccttaataatctgggaaatgcaaatcaaaacaaccctgatat
tccacctcataccagtcaaaatggctaagatcaaaaattcaggtgacagc
agatgctggtgaggatgtggaaaaagaggaacactcctccactgctggtg
ggattgcaagcttgtacaactactctggaagtcagtctggaggttcctca
gaaaattggacataatactactggaagatccagcaatacttctcctgggc
atatacccagaagaagttccaattggtaattagaacacatgctccactat
gttcatagcagccttatttataatagcgagaagctggaaagaacccagat
gtccctcaacagaagaatggatacagaaaatgtgggaaatttacacaatg
gagtactactcagccattacaaacaatgaatttatgaaattcttggacaa
atggatgtatctggaggatatcatccttagtgaggtaacccaatcacaaa
agaagtcattagatatgcactcactgataagtggatattagtccagaaac
atagaacacccaagatacaatttgcaaaacacaagaaaatcaggaaaaga
gaagatcaatgggtggatacttcgttcctccttagaatagggaacaaaat
acccatgaaagaagttacagagataagtttggagctaagaagaaagaatt
gactattcagagactaccccacccagggatccatcccataatcagccacc
aaacccagacactattgcatatgtcagcaagactttgatgaagggtccct
ggtatagttgtctagtatgaggctatgtcagtgcctggcaaatacagaag
tggatgctcacagtcatctatagatggaaaacaggcccccaatggagagc
tagagaaagcacccaagagctgaagggtcttgcaacaaatagtggacaac
aatataactaccagtacccccaaagctctgtctctagctgcatatgtaag
caaagaaatgcccatgcatcctggaagagagaaaccttagatgccacctt
tatgctcatacagcaatgcagtcagaaaaggagaggtgggtaagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_28224769_28225841
seq2: B6Ng01-010K12.b_45_1099

seq1  GAATTCATTACCTCTGATAATCTGATACAGCCTACACTAAGCATAAACCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTACCTCTGATAATCTGATACAGCCTACACTAAGCATAAACCC  50

seq1  ACAAAGGCCACCAAACTTCTTACCTCCTAACAAAGCTTATCTCAGTCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGGCCACCAAACTTCTTACCTCCTAACAAAGCTTATCTCAGTCTCT  100

seq1  CAATCTCCCCTTTTCCCCATTGACTCCAATTGCTGCCCATACAACCCTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTCCCCTTTTCCCCATTGACTCCAATTGCTGCCCATACAACCCTGG  150

seq1  GTGTTGGGTCATCTAATGGAGTGTGGTGCCACAGTCTTAAAGAAAACCGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTGGGTCATCTAATGGAGTGTGGTGCCACAGTCTTAAAGAAAACCGA  200

seq1  CCCTCCCTCAGAGCCATCATCAGTAGCTCCTTGGCTAAAGCTGGGGGCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCCTCAGAGCCATCATCAGTAGCTCCTTGGCTAAAGCTGGGGGCTC  250

seq1  ATGGGCTTCTCCTTCCATGCTGGAAGTTCTTGAACTGGCTTGATCTTGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCTTCTCCTTCCATGCTGGAAGTTCTTGAACTGGCTTGATCTTGTG  300

seq1  CAGGCAGCCACCGCTACTGGGAACTTGTGGGTGCAGTGGTTCTGTCATTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCAGCCACCGCTACTGGGAACTTGTGGGTGCAGTGGTTCTGTCATTG  350

seq1  TCTAGAAGATACTGCTTTGCTCTGACTATCCCCAATCTCCAGCTTTTATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGAAGATACTGCTTTGCTCTGACTATCCCCAATCTCCAGCTTTTATA  400

seq1  ATCGTTTCACCTTTTCTTTTGTAATGATCCTCTGAGTGGGACCCTCATGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGTTTCACCTTTTCTTTTGTAATGATCCTCTGAGTGGGACCCTCATGC  450

seq1  TTGGGGAGGGTATGTACAAAATCCATCTCTGTAAGTTTGTCATAAAAATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGAGGGTATGTACAAAATCCATCTCTGTAAGTTTGTCATAAAAATC  500

seq1  AGACAGAAAGCAAAGGAAACAACTGTTTGTATCAGCCATTGCTATTTTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGAAAGCAAAGGAAACAACTGTTTGTATCAGCCATTGCTATTTTAT  550

seq1  TCCTAATTGCTGGAATTAAGTATCCTCCAGCAAGAGCAGCTGAGCGTGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAATTGCTGGAATTAAGTATCCTCCAGCAAGAGCAGCTGAGCGTGAA  600

seq1  ATACCTTTCAGCATTACTGATACAAAATCACGTGAAAGATACAGGGACCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTTTCAGCATTACTGATACAAAATCACGTGAAAGATACAGGGACCT  650

seq1  AACTGCTGTTTGTAGGCAGGAGGCAGAAGGATGGCTTAACATCTCAAGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCTGTTTGTAGGCAGGAGGCAGAAGGATGGCTTAACATCTCAAGTT  700

seq1  GCATCATCACCATACAAAGAACAGAGTGAAGTCCACTTGGACCCTCCACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCATCACCATACAAAGAACAGAGTGAAGTCCACTTGGACCCTCCACT  750

seq1  CCCCCACATCCCCACCAATTTTTCTTAAAGACCGTTGGCTCATATTTAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCACATCCCCACCAATTTTTCTTAAAGACCGTTGGCTCATATTTAGC  800

seq1  CATTTCCTTGTCCAAGGGAAGAAGTTGGTAATGCCATGGTAAACTTTGTG  850
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CATTTCCTTGTCCAA-GGAAGAAGTTGGTAATGCCATGGTAAACTTTGTG  849

seq1  TTTCACATCCAAGACTAGGCAACGGGAAAGTGAATCAGATGAGCAAGCTT  900
      ||||||||||||||||| |||||||||||||| |||||||||||||||||
seq2  TTTCACATCCAAGACTA-GCAACGGGAAAGTG-ATCAGATGAGCAAGCTT  897

seq1  GGAGGCCGACTGTGAACCTGAACCTTAAAGTCGTAGCCATAGTGCACTTT  950
      ||| |||||||||||| |||||||||||||||||||||||||||||||||
seq2  GGA-GCCGACTGTGAA-CTGAACCTTAAAGTCGTAGCCATAGTGCACTTT  945

seq1  CGTGAATCTGTTACATCCACCTCATTTCAGGGATATGTCTCTGAAGGTCA  1000
      |||| ||||||||||||   ||||||||| |||| |||||||||  ||| 
seq2  CGTG-ATCTGTTACATC--ACTCATTTCA-GGATTTGTCTCTGA--GTC-  988

seq1  ACACTCTCAGAATGCTATAGAGTATGAGTGGTGATTTAGAGCATCTCTTC  1050
      || |||||||||||||||||||||||||||||||||   |||||||||| 
seq2  ACCCTCTCAGAATGCTATAGAGTATGAGTGGTGATT--AAGCATCTCTT-  1035

seq1  CTCAGAATTAAAATAGGTAGTCC  1073
      ||| ||| ||||||| |||||||
seq2  CTC-GAA-TAAAATA-GTAGTCC  1055