BAC Information

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BAC

Clone NameB6Ng01-013I03
Chromosome12 (Build37)
Map Location 25,004,288 - 25,130,460
singlet/doubletdoublet
Overlap geneEG668711, EG668714
Upstream geneLOC100043440, EG668518, LOC100043445, LOC668697, LOC100042923, LOC677338, EG668701, LOC668471, LOC668703, LOC546534, 9030624G23Rik, EG668710, LOC100042945
Downstream geneLOC629364, Taf1b, Grhl1, EG629383, Klf11, Cys1, Rrm2, LOC668719, Mboat2, EG629397, C330002I19Rik, Id2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-013I03.bB6Ng01-013I03.g
ACCDH848305DH848306
length926177
definitionDH848305|Mus musculus domesticus DNA, BAC clone: B6Ng01-013I03, 5' end.DH848306|Mus musculus domesticus DNA, BAC clone: B6Ng01-013I03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(25,004,288 - 25,005,215)(25,130,284 - 25,130,460)
sequence
gaattcaggtcctctgaaacagtagtagttttttgtaagcacagagacag
gtctacaggcctcagagtcctgcccctgattttgagtcagggcctctctc
tgaacccagagagtactattcatcattttgtctacactagctggccagaa
ggaccctagaattggtttctgttgtctctattccagagtgccagggtcac
agcgaacaaggacatatgtggcgttttacacgggtgctgggatctgaacc
caggtccttatgcttacacacagggagcactccacctctcagactgcagc
ttcttgcatttctgcatttaatactttgccaccgtgaacccccacatttc
ccccaaacagggcagggtacacaaactgtttataactgtgagtcagggct
gcatgacatttcagaggctcagcatgagacccaagagactcctcctatcc
tgaaggctcaaacactttgtgacctccagggttagggactcaggaaggaa
tgtgagggatgtgggtgaattagtcttctagaaagctccattctggcaca
atagtgacagtagaataggcactcaggaatgggtcacactaggagctgtt
cacttgccggatgctgatgtccctccttttggacagcaatccagctatgg
ggtcccaagaaaggcttcttgttccttcccaagaggtcattatcatcaaa
gatgctcatcaccagaccagaccttttacaggcctctgcttatgtatggg
accagcaggacatctgggcagctagttccctgtggtggaggagggaaagc
aaaaagcaatgtgtggggtgtgtgccagggccagagctaaggagaactca
cttgccctgcagcacacaaagatgcccatgaggaagtgataagatcccta
cagggacatagttggccagcttacat
cacagccagaactgcttgcccatagaaacccccacttttccctgccttct
ttacaacatggacacaaaggctcctgaatctatgtttcctgagttgcttt
gtataggatctgaaagatgtccttttcattttacaaggttctggttgaat
tgattagtatgagagagtgggggaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_25004288_25005215
seq2: B6Ng01-013I03.b_46_971

seq1  GAATTCAGGTCCTCTGAAACAGTAGTAGTTTTTTGTAAGCACAGAGACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGTCCTCTGAAACAGTAGTAGTTTTTTGTAAGCACAGAGACAG  50

seq1  GTCTACAGGCCTCAGAGTCCTGCCCCTGATTTTGAGTCAGGGCCTCTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTACAGGCCTCAGAGTCCTGCCCCTGATTTTGAGTCAGGGCCTCTCTC  100

seq1  TGAACCCAGAGAGTACTATTCATCATTTTGTCTACACTAGCTGGCCAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCCAGAGAGTACTATTCATCATTTTGTCTACACTAGCTGGCCAGAA  150

seq1  GGACCCTAGAATTGGTTTCTGTTGTCTCTATTCCAGAGTGCCAGGGTCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCCTAGAATTGGTTTCTGTTGTCTCTATTCCAGAGTGCCAGGGTCAC  200

seq1  AGCGAACAAGGACATATGTGGCGTTTTACACGGGTGCTGGGATCTGAACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGAACAAGGACATATGTGGCGTTTTACACGGGTGCTGGGATCTGAACC  250

seq1  CAGGTCCTTATGCTTACACACAGGGAGCACTCCACCTCTCAGACTGCAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTCCTTATGCTTACACACAGGGAGCACTCCACCTCTCAGACTGCAGC  300

seq1  TTCTTGCATTTCTGCATTTAATACTTTGCCACCGTGAACCCCCACATTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGCATTTCTGCATTTAATACTTTGCCACCGTGAACCCCCACATTTC  350

seq1  CCCCAAACAGGGCAGGGTACACAAACTGTTTATAACTGTGAGTCAGGGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAAACAGGGCAGGGTACACAAACTGTTTATAACTGTGAGTCAGGGCT  400

seq1  GCATGACATTTCAGAGGCTCAGCATGAGACCCAAGAGACTCCTCCTATCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGACATTTCAGAGGCTCAGCATGAGACCCAAGAGACTCCTCCTATCC  450

seq1  TGAAGGCTCAAACACTTTGTGACCTCCAGGGTTAGGGACTCAGGAAGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGCTCAAACACTTTGTGACCTCCAGGGTTAGGGACTCAGGAAGGAA  500

seq1  TGTGAGGGATGTGGGTGAATTAGTCTTCTAGAAAGCTCCATTCTGGCACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGGGATGTGGGTGAATTAGTCTTCTAGAAAGCTCCATTCTGGCACA  550

seq1  ATAGTGACAGTAGAATAGGCACTCAGGAATGGGTCACACTAGGAGCTGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGACAGTAGAATAGGCACTCAGGAATGGGTCACACTAGGAGCTGTT  600

seq1  CACTTGCCGGATGCTGATGTCCCTCCTTTTGGACAGCAATCCAGCTATGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGCCGGATGCTGATGTCCCTCCTTTTGGACAGCAATCCAGCTATGG  650

seq1  GGTCCCAAGAAAGGCTTCTTGTTCCTTCCCAAGAGGTCATTATCATCAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCCAAGAAAGGCTTCTTGTTCCTTCCCAAGAGGTCATTATCATCAAA  700

seq1  GATGCTCATCACCAGACCAGACCTTTTACAGGCCTCTGCTTATGTATGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTCATCACCAGACCAGACCTTTTACAGGCCTCTGCTTATGTATGGG  750

seq1  ACCAGCAGGACATCTGGGCAGCTAGTTCCCTGTGGTGGAGGAGGGGAAAG  800
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ACCAGCAGGACATCTGGGCAGCTAGTTCCCTGTGGTGGAGGA-GGGAAAG  799

seq1  CAAAAAGCAATGTGT-GGGTGTGTGCCAGGGCCAGAGCTAAGGAGAACTC  849
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CAAAAAGCAATGTGTGGGGTGTGTGCCAGGGCCAGAGCTAAGGAGAACTC  849

seq1  AC-TGCCCTGCAGCACACAACAGCTGCCCAATGAGGAAGTGATAGTATCC  898
      || ||||||||||||||||| || ||||| ||||||||||||||  ||||
seq2  ACTTGCCCTGCAGCACACAA-AGATGCCC-ATGAGGAAGTGATAAGATCC  897

seq1  CCACAGGGACAGAGGTTGGCCAGCTAACAT  928
      | ||||||||| | ||||||||||| ||||
seq2  CTACAGGGACATA-GTTGGCCAGCTTACAT  926

seq1: chr12_25130284_25130460
seq2: B6Ng01-013I03.g_73_249 (reverse)

seq1  CCCTCCCCCACTCTCTCATACTAATCAATTCAACCAGAACCTTGTAAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCCCCACTCTCTCATACTAATCAATTCAACCAGAACCTTGTAAAAT  50

seq1  GAAAAGGACATCTTTCAGATCCTATACAAAGCAACTCAGGAAACATAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGGACATCTTTCAGATCCTATACAAAGCAACTCAGGAAACATAGAT  100

seq1  TCAGGAGCCTTTGTGTCCATGTTGTAAAGAAGGCAGGGAAAAGTGGGGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAGCCTTTGTGTCCATGTTGTAAAGAAGGCAGGGAAAAGTGGGGGT  150

seq1  TTCTATGGGCAAGCAGTTCTGGCTGTG  177
      |||||||||||||||||||||||||||
seq2  TTCTATGGGCAAGCAGTTCTGGCTGTG  177