BAC Information

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BAC

Clone NameB6Ng01-013O11
Chromosome12 (Build37)
Map Location 69,345,361 - 69,346,056
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040745, LOC100040681
Downstream geneLOC100040696, LOC665967, LOC665973, Rps29, Ppil5, Rpl36al, Mgat2, 1110034A24Rik, 9330151L19Rik, Pole2, Klhdc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-013O11.bB6Ng01-013O11.g
ACCDH848601DH848602
length1,208696
definitionDH848601|Mus musculus domesticus DNA, BAC clone: B6Ng01-013O11, 5' end.DH848602|Mus musculus domesticus DNA, BAC clone: B6Ng01-013O11, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattgtttttaatagctgagtagtactccattgtgtaaatgtacc
acattttctgtgtccattcctctgttgaagggcatcttgtttttttctag
cttctggctattataaataagtcagctatgaacatagtagagcatgtgtt
cttgttatatgttggagcatcttttgggtggtatagctgggtcctcagat
agtattatgtccaattttctgaggaaccaccacactgatatccaaagtag
ttttaccagcttgcaataccaccaacaatggaggagtgttctgctttctc
cacatccttaccagcagctgctgtcacccgagtttttgaacttagccttt
ctagttgctgtgaggtggaatcgcagggttgtttcagttttcatttgatg
atgactaagggtgttaaacatttatttaggtgctactcagccattcagta
ttcctcacttgagatttctttgtttaaatatgtacccaattttaaaaaag
gttatttggttctctagagtctaacttcttgagttctttgtatatatcag
atacaagcctctattggatttagaacccaggatagcaaaaactattcaca
acaataaaagaacttctgggagaatcaccatcactgacttcaagctttac
tacagagcaatagtgataaaaactgcatggtattggtacagagacaagaa
cgtatatcaatggaacagaattgaagacccagatattaacccacacacat
atgttcacttgatctttgacaaggagctaaactatccactggaaaaaaga
caacattttcaacaaatggtgttggttcaactgtacaccagcatgtagag
aatgcaattggcccattctatctccttgtacaaagctcagtgatcaggac
atccacacaaaccagaccacctgaactaatagagagaaagtgggtgagag
cttcaaaccatgggcgcaggaaatttcctgaccgaacaatatggcttatg
ctctcaataaaaattaacaattgggactcataaattgcaagctccgttag
gcaaggtggtgcatgctttatcctattctcgggagcaaggcagcgaattc
tgatcaggcgcctgtctctcaaggagtcctgacgccaggctacggatccg
gtcctacaactacactgcaccgaacaccataggtctatgagtccatccag
tacacgtg
gaattcaagattacaaccgtggaactgaatattttcagctctaaagggct
catggaaagaacagagacacgtgcttgtgccagttcaggggtgagggtaa
ctgctcaaatgggggtgaacaaacactggaagggaaaagaagtcacagga
gagctgggaaaaaatagccacctaaacaaagaagatgtgagtgttattat
ggaagccacagatataccttctttacccttaaatacagctcaggaatacc
agggtttcctctcattctgtacagtttagggacttgtgagctcttcacat
ggcctcggtgcttttccttcatattctgacctctaacagtcacatcattc
tttgagaaatgttttgctttgttgctgggcagccttggctttcaaggttt
catgatgaatttttttttttttttggttttgtttagtttttgtctttttt
gttttattcattttcaatattatcaaaacttaagttacataatttagaag
ctacatttttaacactaacatctccttcattcttaggccagtagatgcct
tcagggcatacaacaacagatgatattgtcttcatccagagccaagttcc
tcagatgattttgaaagttaattttttattgctgactttgtgtgtctctc
tatgtacatgtatacgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_69345361_69346056
seq2: B6Ng01-013O11.g_67_762 (reverse)

seq1  CACACACACACACACACACACACACACACACGTATACATGTACATAGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACGTATACATGTACATAGAGA  50

seq1  GACACACAAAGTCAGCAATAAAAAATTAACTTTCAAAATCATCTGAGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACACAAAGTCAGCAATAAAAAATTAACTTTCAAAATCATCTGAGGAA  100

seq1  CTTGGCTCTGGATGAAGACAATATCATCTGTTGTTGTATGCCCTGAAGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCTCTGGATGAAGACAATATCATCTGTTGTTGTATGCCCTGAAGGC  150

seq1  ATCTACTGGCCTAAGAATGAAGGAGATGTTAGTGTTAAAAATGTAGCTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTACTGGCCTAAGAATGAAGGAGATGTTAGTGTTAAAAATGTAGCTTC  200

seq1  TAAATTATGTAACTTAAGTTTTGATAATATTGAAAATGAATAAAACAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTATGTAACTTAAGTTTTGATAATATTGAAAATGAATAAAACAAAA  250

seq1  AAGACAAAAACTAAACAAAACCAAAAAAAAAAAAAAATTCATCATGAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAAAAACTAAACAAAACCAAAAAAAAAAAAAAATTCATCATGAAAC  300

seq1  CTTGAAAGCCAAGGCTGCCCAGCAACAAAGCAAAACATTTCTCAAAGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAAAGCCAAGGCTGCCCAGCAACAAAGCAAAACATTTCTCAAAGAAT  350

seq1  GATGTGACTGTTAGAGGTCAGAATATGAAGGAAAAGCACCGAGGCCATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGACTGTTAGAGGTCAGAATATGAAGGAAAAGCACCGAGGCCATGT  400

seq1  GAAGAGCTCACAAGTCCCTAAACTGTACAGAATGAGAGGAAACCCTGGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGCTCACAAGTCCCTAAACTGTACAGAATGAGAGGAAACCCTGGTA  450

seq1  TTCCTGAGCTGTATTTAAGGGTAAAGAAGGTATATCTGTGGCTTCCATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGAGCTGTATTTAAGGGTAAAGAAGGTATATCTGTGGCTTCCATAA  500

seq1  TAACACTCACATCTTCTTTGTTTAGGTGGCTATTTTTTCCCAGCTCTCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACTCACATCTTCTTTGTTTAGGTGGCTATTTTTTCCCAGCTCTCCT  550

seq1  GTGACTTCTTTTCCCTTCCAGTGTTTGTTCACCCCCATTTGAGCAGTTAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTTCTTTTCCCTTCCAGTGTTTGTTCACCCCCATTTGAGCAGTTAC  600

seq1  CCTCACCCCTGAACTGGCACAAGCACGTGTCTCTGTTCTTTCCATGAGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACCCCTGAACTGGCACAAGCACGTGTCTCTGTTCTTTCCATGAGCC  650

seq1  CTTTAGAGCTGAAAATATTCAGTTCCACGGTTGTAATCTTGAATTC  696
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGAGCTGAAAATATTCAGTTCCACGGTTGTAATCTTGAATTC  696