BAC Information

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BAC

Clone NameB6Ng01-018C20
Chromosome12 (Build37)
Map Location 33,636,601 - 33,636,905
singlet/doubletsinglet
Overlap genenone
Upstream genePrkar2b, Pik3cg, 2010109K11Rik, LOC100043548, Pbef1, LOC100043553, 4933406C10Rik
Downstream geneSypl, LOC100043109, 1110049B09Rik, Atxn7l4, Atxn7l1, 4930504H06Rik, Twistnb, LOC668801, LOC668806, Ferd3l
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-018C20.bB6Ng01-018C20.g
ACCDH851651DH851652
length8631,219
definitionDH851651|Mus musculus domesticus DNA, BAC clone: B6Ng01-018C20, 5' end.DH851652|Mus musculus domesticus DNA, BAC clone: B6Ng01-018C20, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcacttgaggaataccaaatggctgagaagcacatgaaaaaatg
ttcaccatccttattcttcagggaaatgcaaatcaaaacaatcctgagat
tctacctcataccagtcagaatggctaagataaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
agattgcaagcttgcacaaccactctggaaatcagtctggcagttcctca
gaaaatcggacatagtactactggaggatccagcaatacctctcctgggc
atatatccagaagatgttccaactggtaagaaagacacatgctccactat
gttcatagcagccttatttgtaatagccagaagctggaaagactccagat
gcccctcaacagaggaatggatacagaaactatggtatatttacacaatg
gagtactactcagctactaaaatgaatgaatttatgaaattcctaggcaa
atggattgatttggagggcatcatcctgagtgaggtaacccaatcacaaa
agaattacatgatatatactcactgataagtggatattagcccagaaact
tagaatacccaagtcacaagatacaaagcacacgaaactcaagaagaatg
aagaccaaagtgtggacacttggcccttcttagaattgggaacaaaacac
ccatggaaggagttacagagacaaaggttgttgctgagacaaaaggatgg
accatctagagactaccatatccggggatccatcccataatcagctgcca
aatgcagacaccattgcatacactagcaagattttgctgaaaggacccag
atatagctgtctc
gaattcccctatgctgggccatcaagccttcacaagaccaagggcctctc
ctgtcattgatgtcccacaaggtcatcctctgctacatatgtggctggag
acatgggtccctccatgtgtatcctttggttggtggtttagtccctggga
gctctggggatattggttggttcatattgttcctcctcctatggggctgc
aaacctcttcatcttcttgtgtcctttctctagatctccattggggactc
tgtgctcagtccaatggatggctgtgagcatctgcttctgtatttgtcag
gttctggcagagcctctcagaagagagctatatcagactcctgtcagtaa
gcacttggtaatgtctgcgtttggtaactgtatatgggatggatcccaag
gtgaaacagtaactgaatggcctttccttcagtttctgcctcaaactttt
tctctgtatttcctacaatgtgtattttgttcccccttctaaggactgaa
gtatccatacttcgctgttcctttagataacttggatataaatccttaac
actgatgtacagctggaaatgacttttcctcacatggtagtcaaattccc
actgctctggtgatcatttcctatgctatgaaaaagcttttttagttcga
atgcctctatccagaagtatttatgttttcatatggcactttcaaaattt
ctattctttcaagttccatgatccattttgattttatactttgtctgata
ttaataaacttttaatttcaacctgtggaaataatttttttcagcaccta
ttgttaatttacctggttttttccagtgtacatttgcaagagctttgtca
cacatagatgacaataagtgtatacgtttatttgtacaccatctaacaca
ttgggttctgttgtctacattttgtttgtttgtttgtttgtttttaccaa
tatttgctgcttttaaacttagttccataatatggatttaagaatacggt
attacaatatctccagcaatgttctatccagctaagaattacctttacct
attccgagcctttttctgcttctatatgaaggtagttgatattttaattt
ctgttagatattttggttggaaatacgacgacctggtgcacctaaatcag
gcctctgcaccatttattctttcagggctcctcttcagcaagaaaaaact
cttatttataagatcattc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_33636601_33636905
seq2: B6Ng01-018C20.b_609_905 (reverse)

seq1  GAGACAGCTACATCTGGGTCCTTTCGATAAAATCTTGCTAGTGTATGCAA  50
      |||||||||| ||||||||||||||   ||||||||||||||||||||||
seq2  GAGACAGCTATATCTGGGTCCTTTCAGCAAAATCTTGCTAGTGTATGCAA  50

seq1  TGGTGTCAGCGTTTGGAAGCTGATTATGGGCTGGATCCCTGGATATGGCA  100
      ||||||| || ||||| ||||||||||||| |||||||| |||||||| |
seq2  TGGTGTCTGCATTTGGCAGCTGATTATGGGATGGATCCCCGGATATGGTA  100

seq1  GTCTCTAGATAGTCCATCCTTTCGTCTCAGCTCCAAACTTTGTCTCTGTA  150
      |||||||||| ||||||||||| ||||||||  ||| |||||||||||||
seq2  GTCTCTAGATGGTCCATCCTTTTGTCTCAGCAACAACCTTTGTCTCTGTA  150

seq1  ACTCCTTCCATGGGTGTTTTGTTCCCAATTCTGAGGAGGGGCATAGTGTC  200
      |||||||||||||||||||||||||||||||| || |||| || ||||||
seq2  ACTCCTTCCATGGGTGTTTTGTTCCCAATTCTAAGAAGGGCCA-AGTGTC  199

seq1  CTCACTTCAGTCTTCATTCTTCTTGAGTTTCATGTGTTTAGCAAATTGTA  250
      | |||||  |||||||||||||||||||||| |||| |       |||||
seq2  CACACTTTGGTCTTCATTCTTCTTGAGTTTCGTGTGCT-------TTGTA  242

seq1  TCTTATATCTCGGGTATACTAAGTTTCTGGGCTAATATCCACTTATCAGT  300
      |||| |  || |||||| ||||||||||||||||||||||||||||||||
seq2  TCTTGTGACTTGGGTATTCTAAGTTTCTGGGCTAATATCCACTTATCAGT  292

seq1  GAGTA  305
      |||||
seq2  GAGTA  297