BAC Information

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BAC

Clone NameB6Ng01-019A19
Chromosome12 (Build37)
Map Location 79,476,668 - 79,587,935
singlet/doubletdoublet
Overlap geneGphn
Upstream geneFut8, LOC230765, LOC666659, EG626215
Downstream gene4921509E07Rik, Mpp5, Atp6v1d, LOC100041878, Eif2s1, Plek2, 6330442E10Rik, Plekhh1, Pigh, LOC666722, Arg2, Vti1b, Rdh11, Rdh12, Zfyve26, Rad51l1
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-019A19.bB6Ng01-019A19.g
ACCDH852255DH852256
length1,151976
definitionDH852255|Mus musculus domesticus DNA, BAC clone: B6Ng01-019A19, 5' end.DH852256|Mus musculus domesticus DNA, BAC clone: B6Ng01-019A19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(79,586,786 - 79,587,935)(79,476,668 - 79,477,648)
sequence
gaattctttctcttttacattaaagcaacagcttaataaagtctacaagg
tatagaaatatcttataaaatttagaagcattaatgccatagcttgaaag
atgactgatcttttgattctctgctcagttgcttaccatttaaacaatat
atggtagcctggaagtagtagtgcacacctttaatcccagtactcaggag
gcagaggtaggcagatctctgtgagttccaggccagcctggtctacagag
ctagttctagtatagccacggctatacaaagaaatcctgtcttgaaaaac
aaaaacaaaaacaaacagaaaactaaccaacaaaacgaacaaatgaaaag
tagtatattgaaaagaatataatcttgatgaaacagaggtttgatatttt
ctttcagcttcctaaggctatctccagacatcagaatgtcatgtctgata
aagtatttttatgtgctggcatctttgactaccatatatcctgaaaacta
tgggtaccaaaggctcaggttggcattcatcatcagcaatgatccgcatg
tctattgccactgtgtcaggaacaggatggtaacatgtgcttgattccaa
atgagagcagacaatgaaaacatcttatgtctgccctacgagctttttcc
ttcataattttaatccacattacctccccatataaataatagctataaca
cctgtcagtgagctctgtgaatccttgtgaattagtacgtggttttagga
atcacctaaagcataagtactcattagtgaggctcatcttttggaatgtt
ccaactttgcagctggctgaagaaaatgaaaaaaaaatcatgtttgaacc
ataacatcttccaagagcccgtgaattgccagcataacctatacctctat
gttgtatctcagctatacttatacatttccttttctaacttctgggaaac
gttcatggtataactacatattcaggaagtaaagcttatggaaacttata
atattggagaacatggatgccttgggcaattgaagtcattcttgggaatt
caaggggtggtattaaagtaaaaaattgtctattgtccatccaaagactc
tctctaggattagaaatggctgtgaatcacatcactctggatgataaatt
g
gaattctttaaaaacctgttagaaatctaactttataatgaagatgtctt
taaaactttctattttgaaatattttaaacttgcagattagggctcaaac
tgtgtgtaatttgcaggattatttttctgtttccctttgataatgctgga
cacatctctaagactctatttaaaaatatatgtcaagatcagtatttgtt
cattatttgtgatagttgttctacactgatgtaagatgataattattggg
aaaactacgaagtagggcttagagcaggatatgttcacctcactttttgt
tcaagttttggaaaccttaagctattccaagaaatcgagtttatttattt
aacaaatgtaaatgggtttactcttggttcttgatatatgttgtgacaga
gtccagcaataaatgtagcagctttagcattattaaagccatcaataatg
gaagtttaattcagaatgaaaagccaatgaaatgcttcttctcttggtag
tcatttgttgcctgttttttctaaactaatgaatgaaaaatgaaataaaa
atgttttcccccatgactattgatgtgggtcttgggagatttgtggtggt
actctaatgctaatgcaatatatcagtcatgggcttttaccctgttgctg
gttttaagagtatattcttctaatttcaggttgggtgggactatatcggc
atacaagatagtaccagatgaaatagaagaaatcaaggtatagtatgaaa
ttttcatgcctacaaaggcttagcactttattgcaggtgtggaaaaaaat
tgttagttcttaaatattgaatcaaacattaatctcctatttactcagag
ttaaaatacattcatattacagaagctccatcaaatttatatactgttta
aaataccgttctgggaaaatttaagggaaaataaaaaaaaacccttctta
tgggatttgtgaaaataaaaagatag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_79586786_79587935
seq2: B6Ng01-019A19.b_42_1192 (reverse)

seq1  CAATTTAATCATCCAGAGTGGATGTGA-TCACAGCCAATTCCTAATCCTA  49
      |||||| |||||||||||| ||||||| |||||||| ||| |||||||||
seq2  CAATTT-ATCATCCAGAGT-GATGTGATTCACAGCC-ATTTCTAATCCTA  47

seq1  GGAGAGAGTTCTTTGGATGGAC-ATAGAC-ATATTTTACTTTAATACACA  97
       ||||||| ||||||||||||| |||||| || ||||||||||||||   
seq2  -GAGAGAG-TCTTTGGATGGACAATAGACAATTTTTTACTTTAATACCAC  95

seq1  CCCTTGAATTCCC-AGAATGACTTCAATTGCCCCAGGCATCCATG-TCTC  145
      ||||||||||||| ||||||||||||||||||| ||||||||||| ||||
seq2  CCCTTGAATTCCCAAGAATGACTTCAATTGCCCAAGGCATCCATGTTCTC  145

seq1  CAATA-TATAAGTTTCCAT-AGCTTTACTTCCTGAATATGTAGTTATACC  193
      ||||| ||||||||||||| ||||||||||||||||||||||||||||||
seq2  CAATATTATAAGTTTCCATAAGCTTTACTTCCTGAATATGTAGTTATACC  195

seq1  ATTGAACGTTTCCCAGAAGTTAGAAAAGGAAATGTATAAGTATAGCTGAG  243
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  A-TGAACGTTTCCCAGAAGTTAGAAAAGGAAATGTATAAGTATAGCTGAG  244

seq1  ATACAACATAGAGGTATAGGTTATGCTGGCAATTCACGGGCTCTTGGAAG  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAACATAGAGGTATAGGTTATGCTGGCAATTCACGGGCTCTTGGAAG  294

seq1  ATGTTATGGTTCAAACATGATTTTTTTTTCATTTTCTTCAGCCAGCTGCA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTATGGTTCAAACATGATTTTTTTTTCATTTTCTTCAGCCAGCTGCA  344

seq1  AAGTTGGAACATTCCAAAAGATGAGCCTCACTAATGAGTACTTATGCTTT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGGAACATTCCAAAAGATGAGCCTCACTAATGAGTACTTATGCTTT  394

seq1  AGGTGATTCCTAAAACCACGTACTAATTCACAAGGATTCACAGAGCTCAC  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGATTCCTAAAACCACGTACTAATTCACAAGGATTCACAGAGCTCAC  444

seq1  TGACAGGTGTTATAGCTATTATTTATATGGGGAGGTAATGTGGATTAAAA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGGTGTTATAGCTATTATTTATATGGGGAGGTAATGTGGATTAAAA  494

seq1  TTATGAAGGAAAAAGCTCGTAGGGCAGACATAAGATGTTTTCATTGTCTG  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGAAGGAAAAAGCTCGTAGGGCAGACATAAGATGTTTTCATTGTCTG  544

seq1  CTCTCATTTGGAATCAAGCACATGTTACCATCCTGTTCCTGACACAGTGG  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCATTTGGAATCAAGCACATGTTACCATCCTGTTCCTGACACAGTGG  594

seq1  CAATAGACATGCGGATCATTGCTGATGATGAATGCCAACCTGAGCCTTTG  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAGACATGCGGATCATTGCTGATGATGAATGCCAACCTGAGCCTTTG  644

seq1  GTACCCATAGTTTTCAGGATATATGGTAGTCAAAGATGCCAGCACATAAA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCCATAGTTTTCAGGATATATGGTAGTCAAAGATGCCAGCACATAAA  694

seq1  AATACTTTATCAGACATGACATTCTGATGTCTGGAGATAGCCTTAGGAAG  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTTTATCAGACATGACATTCTGATGTCTGGAGATAGCCTTAGGAAG  744

seq1  CTGAAAGAAAATATCAAACCTCTGTTTCATCAAGATTATATTCTTTTCAA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAGAAAATATCAAACCTCTGTTTCATCAAGATTATATTCTTTTCAA  794

seq1  TATACTACTTTTCATTTGTTCGTTTTGTTGGTTAGTTTTCTGTTTGTTTT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTACTTTTCATTTGTTCGTTTTGTTGGTTAGTTTTCTGTTTGTTTT  844

seq1  TGTTTTTGTTTTTCAAGACAGGATTTCTTTGTATAGCCGTGGCTATACTA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTGTTTTTCAAGACAGGATTTCTTTGTATAGCCGTGGCTATACTA  894

seq1  GAACTAGCTCTGTAGACCAGGCTGGCCTGGAACTCACAGAGATCTGCCTA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTAGCTCTGTAGACCAGGCTGGCCTGGAACTCACAGAGATCTGCCTA  944

seq1  CCTCTGCCTCCTGAGTACTGGGATTAAAGGTGTGCACTACTACTTCCAGG  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGCCTCCTGAGTACTGGGATTAAAGGTGTGCACTACTACTTCCAGG  994

seq1  CTACCATATATTGTTTAAATGGTAAGCAACTGAGCAGAGAATCAAAAGAT  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCATATATTGTTTAAATGGTAAGCAACTGAGCAGAGAATCAAAAGAT  1044

seq1  CAGTCATCTTTCAAGCTATGGCATTAATGCTTCTAAATTTTATAAGATAT  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCATCTTTCAAGCTATGGCATTAATGCTTCTAAATTTTATAAGATAT  1094

seq1  TTCTATACCTTGTAGACTTTATTAAGCTGTTGCTTTAATGTAAAAGAGAA  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATACCTTGTAGACTTTATTAAGCTGTTGCTTTAATGTAAAAGAGAA  1144

seq1  AGAATTC  1150
      |||||||
seq2  AGAATTC  1151

seq1: chr12_79476668_79477648
seq2: B6Ng01-019A19.g_66_1041

seq1  GAATTCTTTAAAAACCTGTTAGAAATCTAACTTTATAATGAAGATGTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAAAAACCTGTTAGAAATCTAACTTTATAATGAAGATGTCTT  50

seq1  TAAAACTTTCTATTTTGAAATATTTTAAACTTGCAGATTAGGGCTCAAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACTTTCTATTTTGAAATATTTTAAACTTGCAGATTAGGGCTCAAAC  100

seq1  TGTGTGTAATTTGCAGGATTATTTTTCTGTTTCCCTTTGATAATGCTGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTAATTTGCAGGATTATTTTTCTGTTTCCCTTTGATAATGCTGGA  150

seq1  CACATCTCTAAGACTCTATTTAAAAATATATGTCAAGATCAGTATTTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCTCTAAGACTCTATTTAAAAATATATGTCAAGATCAGTATTTGTT  200

seq1  CATTATTTGTGATAGTTGTTCTACACTGATGTAAGATGATAATTATTGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATTTGTGATAGTTGTTCTACACTGATGTAAGATGATAATTATTGGG  250

seq1  AAAACTACGAAGTAGGGCTTAGAGCAGGATATGTTCACCTCACTTTTTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTACGAAGTAGGGCTTAGAGCAGGATATGTTCACCTCACTTTTTGT  300

seq1  TCAAGTTTTGGAAACCTTAAGCTATTCCAAGAAATCGAGTTTATTTATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTTTTGGAAACCTTAAGCTATTCCAAGAAATCGAGTTTATTTATTT  350

seq1  AACAAATGTAAATGGGTTTACTCTTGGTTCTTGATATATGTTGTGACAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAATGTAAATGGGTTTACTCTTGGTTCTTGATATATGTTGTGACAGA  400

seq1  GTCCAGCAATAAATGTAGCAGCTTTAGCATTATTAAAGCCATCAATAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGCAATAAATGTAGCAGCTTTAGCATTATTAAAGCCATCAATAATG  450

seq1  GAAGTTTAATTCAGAATGAAAAGCCAATGAAATGCTTCTTCTCTTGGTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTTAATTCAGAATGAAAAGCCAATGAAATGCTTCTTCTCTTGGTAG  500

seq1  TCATTTGTTGCCTGTTTTTTCTAAACTAATGAATGAAAAATGAAATAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTGTTGCCTGTTTTTTCTAAACTAATGAATGAAAAATGAAATAAAA  550

seq1  ATGTTTTCCCCCATGACTATTGATGTGGGTCTTGGGAGATTTGTGGTGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTTCCCCCATGACTATTGATGTGGGTCTTGGGAGATTTGTGGTGGT  600

seq1  ACTCTAATGCTAATGCAATATATCAGTCATGGGCTTTTACCCTGTTGCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTAATGCTAATGCAATATATCAGTCATGGGCTTTTACCCTGTTGCTG  650

seq1  GTTTTAAGAGTATATTCTTCTAATTTCAGGTTGGGTGGGACTATATCGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAAGAGTATATTCTTCTAATTTCAGGTTGGGTGGGACTATATCGGC  700

seq1  ATACAAGATAGTACCAGATGAAATAGAAGAAATCAAGGTATAGTATGAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAGATAGTACCAGATGAAATAGAAGAAATCAAGGTATAGTATGAAA  750

seq1  TTTTCATGCCTACAAAGGCTTAGCACTTTAATTGCAAGGTGTGGAAAAAA  800
      ||||||||||||||||||||||||||||| ||||| ||||||||||||||
seq2  TTTTCATGCCTACAAAGGCTTAGCACTTT-ATTGC-AGGTGTGGAAAAAA  798

seq1  ATTGTTAGTTCTTAAATATTGAATCAAACATTAATCTCCTATTTACTCAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTAGTTCTTAAATATTGAATCAAACATTAATCTCCTATTTACTCAG  848

seq1  AGTTAAAAATACATTCATATTACAGAAGCTCCATCAAATTTTATATACTG  900
      |||| ||||||||||||||||||||||||||||||||| |||||||||||
seq2  AGTT-AAAATACATTCATATTACAGAAGCTCCATCAAA-TTTATATACTG  896

seq1  TTTACAATACCGTTCTGGGAAAAATTTAAGGGGAATATAAAAGAAACCCT  950
      |||| |||||||||||||| |||||||||||| ||   |||| |||||||
seq2  TTTAAAATACCGTTCTGGG-AAAATTTAAGGGAAAATAAAAAAAAACCCT  945

seq1  TCCTATGTGATTTGTTGAAAAT-AAAAGATAG  981
      || |||| |||||| ||||||| |||||||||
seq2  TCTTATGGGATTTG-TGAAAATAAAAAGATAG  976