BAC Information

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BAC

Clone NameB6Ng01-019A22
Chromosome12 (Build37)
Map Location 93,838,570 - 93,961,436
singlet/doubletdoublet
Overlap genenone
Upstream geneSton2, EG666955, LOC100039631, Sel1l, LOC100039367, EG432681, LOC667589, LOC100039387, LOC100039425, LOC628116
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-019A22.bB6Ng01-019A22.g
ACCDH852261DH852262
length1,1041,157
definitionDH852261|Mus musculus domesticus DNA, BAC clone: B6Ng01-019A22, 5' end.DH852262|Mus musculus domesticus DNA, BAC clone: B6Ng01-019A22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(93,960,318 - 93,961,436)(93,838,570 - 93,839,720)
sequence
gaattccttcagtggaattaactactcattgagttacctaattaataatc
agtattgattatttttcttttcttcccaatgtttccccacttccctaccc
ttgggcaggttcctttgtcttccatatccttataaaaatattaagtgtta
tggggcacatttaactcatcagaataagatgaattggaaattgcaaggaa
catgggggacttcttattggtcacttattgttaatgccattttgtaaagc
ttattttagaagtaatactccataaagtctaagagcattaataacaaaag
cttgctgagataactctgccagcaatttgcaagtttcatcttgcttagcc
ttttcagtaattttatgaattggtttctattattaaacatcattaagtgg
aaaccgaagtacaaaagcagtgaaataaattggtgaggtggtatcaacac
aggaagtaactgattagactgaaagtacatgataaattcctaactctacc
atctggcagcagagcaattcttaaacttcaaatgaaacgattagctgtta
tattttcaatacatctctgtagcagtataaaacaaaaaacattttgaggg
gtcaatagacatttattattgaatatttatccagggatttttttttataa
atccaattgtgttctttacctttctcattgccatgacaaaagccaatatt
aggaagaaacggttgacctgggctcacattcatcacggtatagaagttgt
ataaacaagtccataagatagttgcttgcatctggagtcaggaagaagac
agaggtgaaagctgatgtccatccttcaattttcttttgattcagtcagg
aacccatggataagtactacccatgttagtaataggtcctccctaccatg
gcatgataaccctcaggtgtatagtggtactcataacttggcagcaagca
aatctatgtagttgactcaacactctctcacagaaaggaaattgggcttg
tatgggaaactagatagctacatggtactacatcacgatatagatcataa
ctactacaggctactttatagcagcatgtttctacagcatttgtaaggtt
tatt
gaattcaaaacacaggattatccagctggtaagtaaaaggtcaccagaga
ctacctagtgaacagtagggttctggggggaaattcgtaaggcagaatgt
gtgcctggctttggggatgactaggaaacgtgacatttatagataccaac
ctgctattgcgtacaacacaggcagagtaagtacaaaaaagaatgattcc
ctgctgttgataatatttcaattcacacacatgcttcattgtcctaaaat
gtctcttagcaaatccacctctcacagctgctaataaacacattaggtac
atggatagattggcagtccatcatcatcttcattatgtgtgttgctatgt
gtttcgagcctggctgaatcaagtccctttttattattggagcatagcta
gtggacttgatttgtgagccagcaagcagtaacgacaccgacaggattat
caacaacgaagggatcattctgtcttcgaggccccagaaagttctgtttt
aaaatgtatttcaaagagtcttgactgcctcaattcactttgctatttct
ccaaaggtgaattcagagggagcttttggaaatcaaattagctgtaatag
cattcttacagcatattttcttctccagggacagtggccaaaggggagat
tcctccacatgcacttaaagatgtaaatattttaacgcttctccagtttg
caaaacatcaccttagttgagaagtgtaggttcttggagagttctgcttc
tctctgaggttttagtgcacccctgcatgattttttaattgcttccatct
ccaggttgtgttttttgcactacagtctccaccttcagagtgtccctcag
catataaatgtctcatgggaggcatgccagccactctgttctgaactaca
catttgcatctgtcccaccagagagtggagtgaactcaaaagggggtgag
aaggattgcaaggttctcacaggctactgtaagatgcagcaaggtcaagg
ccactgaatgcaccagtctgatgcaagttgttggcttctcactttgtata
cgtacttttgcatataacaaggcgaattaaatggtaccagagtgccctgg
aatattgggcaaaatgagttacttaattccttccttaaaaaaaaaaagaa
tttattg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_93960318_93961436
seq2: B6Ng01-019A22.b_43_1146 (reverse)

seq1  AATAAACCTTTACAATGCTGTAAGAAACCATGCTGGCTTAATAAAGTAG-  49
      ||||||||||   |||||||| ||||| |||||| |||  ||||||||| 
seq2  AATAAACCTTACAAATGCTGT-AGAAA-CATGCT-GCT--ATAAAGTAGC  45

seq1  CTGTAGTAGGTTATGATCTAATATCCGTGATGTAGTACCATGTAGCTATC  99
      |||||||| |||||||||| |||| |||||||||||||||||||||||||
seq2  CTGTAGTA-GTTATGATCT-ATAT-CGTGATGTAGTACCATGTAGCTATC  92

seq1  TAGGTTTCCCATACAAGCCCCAATTTCCTTTCTGTTGAGAGAGTGTTGAG  149
      || |||||||||||||| |||||||||||||||| |||||||||||||| 
seq2  TA-GTTTCCCATACAAG-CCCAATTTCCTTTCTG-TGAGAGAGTGTTGA-  138

seq1  GTCAACTACATAGATTTTGCTTGCTGCCAAGTTATGAGTACCACTATTAC  199
      |||||||||||||| ||||||||||||||||||||||||||||||| |||
seq2  GTCAACTACATAGA-TTTGCTTGCTGCCAAGTTATGAGTACCACTA-TAC  186

seq1  ACCCTGAGGGTTATCATGCCATGGTAGGGAGGACCTATTACTAACATGGG  249
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  A-CCTGAGGGTTATCATGCCATGGTAGGGAGGACCTATTACTAACATGGG  235

seq1  TAGTACTTATCCATGGGTTCCCTGACTGAATCAAAAGAAAATTGAAGGAT  299
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TAGTACTTATCCATGGGTT-CCTGACTGAATCAAAAGAAAATTGAAGGAT  284

seq1  GGACATCAGCTTTCACCTCTGTCTTCTTCCTGACTCCAGATGCAAGCAAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATCAGCTTTCACCTCTGTCTTCTTCCTGACTCCAGATGCAAGCAAC  334

seq1  TATCTTATGGACTTGTTTATACAACTTCTATACCGTGATGAATGTGAGCC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTATGGACTTGTTTATACAACTTCTATACCGTGATGAATGTGAGCC  384

seq1  CAGGTCAACCGTTTCTTCCTAATATTGGCTTTTGTCATGGCAATGAGAAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTCAACCGTTTCTTCCTAATATTGGCTTTTGTCATGGCAATGAGAAA  434

seq1  GGTAAAGAACACAATTGGATTTATAAAAAAAAATCCCTGGATAAATATTC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAAGAACACAATTGGATTTATAAAAAAAAATCCCTGGATAAATATTC  484

seq1  AATAATAAATGTCTATTGACCCCTCAAAATGTTTTTTGTTTTATACTGCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATAAATGTCTATTGACCCCTCAAAATGTTTTTTGTTTTATACTGCT  534

seq1  ACAGAGATGTATTGAAAATATAACAGCTAATCGTTTCATTTGAAGTTTAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGATGTATTGAAAATATAACAGCTAATCGTTTCATTTGAAGTTTAA  584

seq1  GAATTGCTCTGCTGCCAGATGGTAGAGTTAGGAATTTATCATGTACTTTC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTGCTCTGCTGCCAGATGGTAGAGTTAGGAATTTATCATGTACTTTC  634

seq1  AGTCTAATCAGTTACTTCCTGTGTTGATACCACCTCACCAATTTATTTCA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTAATCAGTTACTTCCTGTGTTGATACCACCTCACCAATTTATTTCA  684

seq1  CTGCTTTTGTACTTCGGTTTCCACTTAATGATGTTTAATAATAGAAACCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTTTGTACTTCGGTTTCCACTTAATGATGTTTAATAATAGAAACCA  734

seq1  ATTCATAAAATTACTGAAAAGGCTAAGCAAGATGAAACTTGCAAATTGCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATAAAATTACTGAAAAGGCTAAGCAAGATGAAACTTGCAAATTGCT  784

seq1  GGCAGAGTTATCTCAGCAAGCTTTTGTTATTAATGCTCTTAGACTTTATG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAGTTATCTCAGCAAGCTTTTGTTATTAATGCTCTTAGACTTTATG  834

seq1  GAGTATTACTTCTAAAATAAGCTTTACAAAATGGCATTAACAATAAGTGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTATTACTTCTAAAATAAGCTTTACAAAATGGCATTAACAATAAGTGA  884

seq1  CCAATAAGAAGTCCCCCATGTTCCTTGCAATTTCCAATTCATCTTATTCT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATAAGAAGTCCCCCATGTTCCTTGCAATTTCCAATTCATCTTATTCT  934

seq1  GATGAGTTAAATGTGCCCCATAACACTTAATATTTTTATAAGGATATGGA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGTTAAATGTGCCCCATAACACTTAATATTTTTATAAGGATATGGA  984

seq1  AGACAAAGGAACCTGCCCAAGGGTAGGGAAGTGGGGAAACATTGGGAAGA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAAGGAACCTGCCCAAGGGTAGGGAAGTGGGGAAACATTGGGAAGA  1034

seq1  AAAGAAAAATAATCAATACTGATTATTAATTAGGTAACTCAATGAGTAGT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAAATAATCAATACTGATTATTAATTAGGTAACTCAATGAGTAGT  1084

seq1  TAATTCCACTGAAGGAATTC  1119
      ||||||||||||||||||||
seq2  TAATTCCACTGAAGGAATTC  1104

seq1: chr12_93838570_93839720
seq2: B6Ng01-019A22.g_66_1222

seq1  GAATTCAAAACACAGGATTATCCAGCTGGTAAGTAAAAGGTCACCAGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAACACAGGATTATCCAGCTGGTAAGTAAAAGGTCACCAGAGA  50

seq1  CTACCTAGTGAACAGTAGGGTTCTGGGGGGAAATTCGTAAGGCAGAATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCTAGTGAACAGTAGGGTTCTGGGGGGAAATTCGTAAGGCAGAATGT  100

seq1  GTGCCTGGCTTTGGGGATGACTAGGAAACGTGACATTTATAGATACCAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTGGCTTTGGGGATGACTAGGAAACGTGACATTTATAGATACCAAC  150

seq1  CTGCTATTGCGTACAACACAGGCAGAGTAAGTACAAAAAAGAATGATTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTATTGCGTACAACACAGGCAGAGTAAGTACAAAAAAGAATGATTCC  200

seq1  CTGCTGTTGATAATATTTCAATTCACACACATGCTTCATTGTCCTAAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGTTGATAATATTTCAATTCACACACATGCTTCATTGTCCTAAAAT  250

seq1  GTCTCTTAGCAAATCCACCTCTCACAGCTGCTAATAAACACATTAGGTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTTAGCAAATCCACCTCTCACAGCTGCTAATAAACACATTAGGTAC  300

seq1  ATGGATAGATTGGCAGTCCATCATCATCTTCATTATGTGTGTTGCTATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATAGATTGGCAGTCCATCATCATCTTCATTATGTGTGTTGCTATGT  350

seq1  GTTTCGAGCCTGGCTGAATCAAGTCCCTTTTTATTATTGGAGCATAGCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCGAGCCTGGCTGAATCAAGTCCCTTTTTATTATTGGAGCATAGCTA  400

seq1  GTGGACTTGATTTGTGAGCCAGCAAGCAGTAACGACACCGACAGGATTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGACTTGATTTGTGAGCCAGCAAGCAGTAACGACACCGACAGGATTAT  450

seq1  CAACAACGAAGGGATCATTCTGTCTTCGAGGCCCCAGAAAGTTCTGTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAACGAAGGGATCATTCTGTCTTCGAGGCCCCAGAAAGTTCTGTTTT  500

seq1  AAAATGTATTTCAAAGAGTCTTGACTGCCTCAATTCACTTTGCTATTTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTATTTCAAAGAGTCTTGACTGCCTCAATTCACTTTGCTATTTCT  550

seq1  CCAAAGGTGAATTCAGAGGGAGCTTTTGGAAATCAAATTAGCTGTAATAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGGTGAATTCAGAGGGAGCTTTTGGAAATCAAATTAGCTGTAATAG  600

seq1  CATTCTTACAGCATATTTTCTTCTCCAGGGACAGTGGCCAAAGGGGAGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTTACAGCATATTTTCTTCTCCAGGGACAGTGGCCAAAGGGGAGAT  650

seq1  TCCTCCACATGCACTTAAAGATGTAAATATTTTAACGCTTCTCCAGTTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCACATGCACTTAAAGATGTAAATATTTTAACGCTTCTCCAGTTTG  700

seq1  CAAAACATCACCTTAGTTGAGAAGTGTAGGTTCTTGGAGAGTTCTGCTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACATCACCTTAGTTGAGAAGTGTAGGTTCTTGGAGAGTTCTGCTTC  750

seq1  TCTCTGAGGTTTTCAGTGCACCCCTGCATGATTTTTTAATTGCTTCCACC  800
      ||||||||||||| |||||||||||||||||||||||||||||||||| |
seq2  TCTCTGAGGTTTT-AGTGCACCCCTGCATGATTTTTTAATTGCTTCCATC  799

seq1  TCCAGGTTGTG-TTTTTGCACTACAGTCTTCCACTTCAGAGTGTCCCTCA  849
      ||||||||||| ||||||||||||||||| |  |||||||||||||||||
seq2  TCCAGGTTGTGTTTTTTGCACTACAGTCTCCACCTTCAGAGTGTCCCTCA  849

seq1  GCATATAAATGTCTCAT-GGAGGCATGCCAGCCACTCTGTTCTGAACTAC  898
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GCATATAAATGTCTCATGGGAGGCATGCCAGCCACTCTGTTCTGAACTAC  899

seq1  ACATTTGCATCTGTCCCACCAGAGAGTGGAGTGAACTCAAAA-GGGGTGA  947
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ACATTTGCATCTGTCCCACCAGAGAGTGGAGTGAACTCAAAAGGGGGTGA  949

seq1  G-AGGATTGCAACGTTCTACACAGGCCACTGTAAGATGCAGCAAGGTCAA  996
      | |||||||||| ||||| ||||||| |||||||||||||||||||||||
seq2  GAAGGATTGCAAGGTTCT-CACAGGCTACTGTAAGATGCAGCAAGGTCAA  998

seq1  GGCCACTGAATGCAGCAGTCTGATGCAAGTTGTTGGCTCTGCACTTTGTA  1046
      |||||||||||||| |||||||||||||||||||||||   |||||||||
seq2  GGCCACTGAATGCACCAGTCTGATGCAAGTTGTTGGCTTCTCACTTTGTA  1048

seq1  T-CGTACTTTTGCATCTAACAA-GCGATTTTATTGTTTACAAGTTGCCTT  1094
      | ||||||||||||| |||||| |||| || | || |  ||   |||| |
seq2  TACGTACTTTTGCATATAACAAGGCGAATTAAATGGTACCAGAGTGCCCT  1098

seq1  GGAATATTGTGCAAAATGAGTTACTTA--TTCTTCCTTTAAAAAAAAAGG  1142
      ||||||||| |||||||||||||||||  | ||||||| ||||||||| |
seq2  GGAATATTGGGCAAAATGAGTTACTTAATTCCTTCCTTAAAAAAAAAAAG  1148

seq1  ATTTTATTG  1151
      | |||||||
seq2  AATTTATTG  1157