BAC Information

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BAC

Clone NameB6Ng01-020O04
Chromosome12 (Build37)
Map Location 81,681,386 - 81,849,379
singlet/doubletdoublet
Overlap geneGalntl1, LOC100041715, Erh, Slc39a9, 3830431G21Rik
Upstream geneRad51l1, LOC100041968, LOC435309, LOC100041674, LOC666754, Zfp36l1, Actn1, Wdr22, Exdl2, 2310002D06Rik
Downstream geneGm1568, 4933426M11Rik, Sfrs5, Slc10a1, Smoc1, Slc8a3, LOC100042143, LOC100042148, EG214321, Hspe1-ps2, Adam4, 1810020G14Rik, Synj2bp, Adam21, Med6, Ttc9, LOC100041821, Map3k9
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-020O04.bB6Ng01-020O04.g
ACCDH853555DH853556
length353916
definitionDH853555|Mus musculus domesticus DNA, BAC clone: B6Ng01-020O04, 5' end.DH853556|Mus musculus domesticus DNA, BAC clone: B6Ng01-020O04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(81,681,386 - 81,681,739)(81,848,606 - 81,849,379)
sequence
tccaagaaagaaaaggagggagcaggggccttctgccgcgtgtctgctgt
tcgtcaggatgggctgacagaaaaggatgaggtccttacaagggaaccct
aagagggcaggtagccctgcctgggtgtggtacatgtgcctatagtccca
atatcggcaggaggatcatacctgagtccagactgcatggtgaaaggaag
aagggaagatgagggagaaggaaggagaggggaaagaggaggaagggaat
atgtggaagaacaaaaacagcccaagtttcaaaacgacaatggatttgaa
tgagcatttgtttaaagacttacaattggccacacacaaataaaaatagt
tca
gaattcccactccagacactccatgcattgtgatgtatgggctggctgca
aggatccagaactcagattccaagtatctccaggttttctggaagacttt
gtcctactgataaaacaaatcaattaattgaaaaaaattaaagtggttag
agtactagagtaataaaaagaaactccacctctttggtctcaatattttg
aggcctgccattattccattgttttttttctgggtgccatcagtattgcc
agctatgataagctactccttcagacacaggtaagcacttgtttccacta
ttatgtgaagcctgcttccttcctgaagtgggggttcctctgaactcgtc
tgcacctcacttgaaacacgtgtggctttagccaaagaagcccttcctgc
ttcttgactaagattcacagcagaaagggatggggaatgaagcagttttc
atctccttaatgtgggtgtagcaaagccctgggttacgaagtcagactct
gttgccacaggtaaagggagagaaggaggaagtgaataaaacttctctag
caagataagggctagctatggaaggttattaaaacaagtaaaaggaaggt
tagggagaaggaagaaaggagaaaggaagaaaggggggaaaaaaagaaaa
ggagggctagagtaatggcccagaggttaaaagcactggctgctcgtcca
gcggacctggcctccatcctcagcacccatagggcagcccctaaccctct
gtaaccccagccacaggcccagtcatgggagttctgatgctctcttttgg
tctctgatgacactacatgcaggtggaacactgcatgtaggcaaagcacc
cagacacttaaatgagagagagacagagagagagagagagagagagagag
agagaggagatgtgac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_81681386_81681739
seq2: B6Ng01-020O04.b_47_399

seq1  TCCAAGAAAGAAAAGGAGGGAGCAGGGGCCTTCTGCCGCGTGTCTGCTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGAAAGAAAAGGAGGGAGCAGGGGCCTTCTGCCGCGTGTCTGCTGT  50

seq1  TCGTCAGGATGGGCTGACAGAAAAGGATGAGGTCCTTACAAGGGAACCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTCAGGATGGGCTGACAGAAAAGGATGAGGTCCTTACAAGGGAACCCT  100

seq1  AAGAGGGCAGGTAGCCCTGCCTGGGTGTGGTACATGTGCCTATAGTCCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGGCAGGTAGCCCTGCCTGGGTGTGGTACATGTGCCTATAGTCCCA  150

seq1  ATATCGGCAGGAGGATCATACCTGAGTCCAGACTGCATGGTGAAAGGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCGGCAGGAGGATCATACCTGAGTCCAGACTGCATGGTGAAAGGAAG  200

seq1  AAGGGAAGATGAGGGAGAAGGAAGGAGAGGGGAAAGAGGAGGAAGGGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AAGGGAAGATGAGGGAGAAGGAAGGAGAGGGGAAAGAGGAGGAAGGGAAT  250

seq1  ACAAAGGAAGAAGAAAAACAGCCCAAGTTTTAAAACGACAATGGATTTGA  300
      |    ||||||| ||||||||||||||||| |||||||||||||||||||
seq2  A-TGTGGAAGAACAAAAACAGCCCAAGTTTCAAAACGACAATGGATTTGA  299

seq1  ATGAGCATTTGTTTAAAGACTTACAAATGGCCACACACAAATAAAAATAG  350
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  ATGAGCATTTGTTTAAAGACTTACAATTGGCCACACACAAATAAAAATAG  349

seq1  CTCA  354
       |||
seq2  TTCA  353

seq1: chr12_81848606_81849379
seq2: B6Ng01-020O04.g_67_840 (reverse)

seq1  GACTGGGCCTGTGGCTGGGGTTACAGAGGGTTAGGGGCTGCCCTATGGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGGGCCTGTGGCTGGGGTTACAGAGGGTTAGGGGCTGCCCTATGGGT  50

seq1  GCTGAGGATGGAGGCCAGGTCCGCTGGACGAGCAGCCAGTGCTTTTAACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGGATGGAGGCCAGGTCCGCTGGACGAGCAGCCAGTGCTTTTAACC  100

seq1  TCTGGGCCATTACTCTAGCCCTCCTTTTCTTTTTTTCCCCCCTTTCTTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGCCATTACTCTAGCCCTCCTTTTCTTTTTTTCCCCCCTTTCTTCC  150

seq1  TTTCTCCTTTCTTCCTTCTCCCTAACCTTCCTTTTACTTGTTTTAATAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCCTTTCTTCCTTCTCCCTAACCTTCCTTTTACTTGTTTTAATAAC  200

seq1  CTTCCATAGCTAGCCCTTATCTTGCTAGAGAAGTTTTATTCACTTCCTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCATAGCTAGCCCTTATCTTGCTAGAGAAGTTTTATTCACTTCCTCC  250

seq1  TTCTCTCCCTTTACCTGTGGCAACAGAGTCTGACTTCGTAACCCAGGGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTCCCTTTACCTGTGGCAACAGAGTCTGACTTCGTAACCCAGGGCT  300

seq1  TTGCTACACCCACATTAAGGAGATGAAAACTGCTTCATTCCCCATCCCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTACACCCACATTAAGGAGATGAAAACTGCTTCATTCCCCATCCCTT  350

seq1  TCTGCTGTGAATCTTAGTCAAGAAGCAGGAAGGGCTTCTTTGGCTAAAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTGTGAATCTTAGTCAAGAAGCAGGAAGGGCTTCTTTGGCTAAAGC  400

seq1  CACACGTGTTTCAAGTGAGGTGCAGACGAGTTCAGAGGAACCCCCACTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACGTGTTTCAAGTGAGGTGCAGACGAGTTCAGAGGAACCCCCACTTC  450

seq1  AGGAAGGAAGCAGGCTTCACATAATAGTGGAAACAAGTGCTTACCTGTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGAAGCAGGCTTCACATAATAGTGGAAACAAGTGCTTACCTGTGT  500

seq1  CTGAAGGAGTAGCTTATCATAGCTGGCAATACTGATGGCACCCAGAAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGGAGTAGCTTATCATAGCTGGCAATACTGATGGCACCCAGAAAAA  550

seq1  AAACAATGGAATAATGGCAGGCCTCAAAATATTGAGACCAAAGAGGTGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAATGGAATAATGGCAGGCCTCAAAATATTGAGACCAAAGAGGTGGA  600

seq1  GTTTCTTTTTATTACTCTAGTACTCTAACCACTTTAATTTTTTTCAATTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTTTTTATTACTCTAGTACTCTAACCACTTTAATTTTTTTCAATTA  650

seq1  ATTGATTTGTTTTATCAGTAGGACAAAGTCTTCCAGAAAACCTGGAGATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATTTGTTTTATCAGTAGGACAAAGTCTTCCAGAAAACCTGGAGATA  700

seq1  CTTGGAATCTGAGTTCTGGATCCTTGCAGCCAGCCCATACATCACAATGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGAATCTGAGTTCTGGATCCTTGCAGCCAGCCCATACATCACAATGC  750

seq1  ATGGAGTGTCTGGAGTGGGAATTC  774
      ||||||||||||||||||||||||
seq2  ATGGAGTGTCTGGAGTGGGAATTC  774