BAC Information

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BAC

Clone NameB6Ng01-021J05
Chromosome12 (Build37)
Map Location 25,255,441 - 25,355,495
singlet/doubletdoublet
Overlap geneGrhl1, EG629383, Klf11, Cys1
Upstream geneLOC668697, LOC100042923, LOC677338, EG668701, LOC668471, LOC668703, LOC546534, 9030624G23Rik, EG668710, LOC100042945, EG668711, EG668714, LOC629364, Taf1b
Downstream geneRrm2, LOC668719, Mboat2, EG629397, C330002I19Rik, Id2, LOC100042973, LOC100042974
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-021J05.bB6Ng01-021J05.g
ACCDH854042DH854043
length1,022956
definitionDH854042|Mus musculus domesticus DNA, BAC clone: B6Ng01-021J05, 5' end.DH854043|Mus musculus domesticus DNA, BAC clone: B6Ng01-021J05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(25,255,441 - 25,256,477)(25,354,532 - 25,355,495)
sequence
gaattcttccctcaggatgatcttgcccagaggtcaatttttggtccaga
tctcccactggaactccagtctagtatccatctgcgtgactcatgtactc
agaaggaaaatgaattttaaacttagcacatcctaaacaggacccttgcc
cacttataaactgctatgtctgctgtccctcgccatctcagaggcagcag
tcactctatccagctgctcagctgaaacctctggtcgttctgaacaagaa
tgactttggttgctgttgtcaaagtttcactttgggcctggcctggaact
ggagagcctcctgcctcaactcctgagtcctgggattgtctgcacaccat
ctgtcagaggtgctctctaacctgccctttgggtctcagagaatcctgtt
cgtttgaacacagaggcatctagaattcaaacccttctcagtgtcccatc
accccgggtcatgcttctggctactatttatcttttgcttgtctcttttg
aaattgcctcctgctgattccctaccattcagtgaccagattatttgaaa
acacgagtgaagtctgtctatgccctaccgcaagtccttcaaagcttcct
cacttaaggccttacagaaacccgcggggctctacagtttgcaccagtgc
ccagttactctctggccacactgctttcctagctcctcagtggacacact
cgtgtctcctctatcacggtctatagctgtgccttcacccttatgcccac
cccctcgccatctacatctttaaacccagagagctccactctactttccc
catccacctgcaaagagtgccatctctctccgcacaccaaaggagtcacc
gtgactctcaaagtaggacgctttaggaggcaggaaaatttgcctgctct
gtctctgcttgtcctctctgtctaggtccctgtctctactgttgtaggct
gagctgaggtaaagaaccgacccatagaaaatggttaaaggggtaggata
tggaggaaagtgaagccatctg
gaattcagcatagcgacacactattggcttattcaaacatcagcagaaaa
attacatgtacgtgcagggtgtcagagttctgcgagttgttgactcagtt
cagatagcccagttatgtcctcacattcctctttatcttaatggacaaga
tgttcccaagaatgttttaactacggggcatacccgggtttctttttctt
tgttctcagccccaggcagcctctaggctcacaaacaaccagcaatttct
gagtactttatatgacttacaggtcgtgaaatttcatctttctttcatgc
ccagggtaaacatgaactcagtgcatacttgctgaagggaaggtataggg
ctcttgaggctgggtgatatgatccctggaggtagggataggatggtctc
atgctaggcacattgggacactgatgtctcgaggtgagagacagaatgaa
cccctaagtggtggcagctgggaggcaagagacccaatctcagtgctgct
gtttctttctttctttctttctttctttctttctttctttctttctttct
ttctttctttctttctttctttctttctttctttctttctttctttcttt
ctttctctctctctctctctctttctctctctctctctctctctctctct
ctttctttcttttttgttcattttttgagttttataagtctcttccacag
cctcagtttttcttgacttgcaaaatgggtaatttggggctccagagtcc
aagggaagaggctccatcctgatgttacagactcttgatttaaacacggt
ggctgttgactcctccataaagccagagtgtggtccttatactggtgaca
agttttgatgcctttctatcttctgctcaaggggcccagagagaaggtta
aggcaaccctgaagacgctgtgcctctgataagatgggaagagccttaat
gcttcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_25255441_25256477
seq2: B6Ng01-021J05.b_43_1064

seq1  GAATTCTTCCCTCAGGATGATCTTGCCCAGAGGTCAATTTTTGGTCCAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCCCTCAGGATGATCTTGCCCAGAGGTCAATTTTTGGTCCAGA  50

seq1  TCTCCCACTGGAACTCCAGTCTAGTATCCATCTGCGTGACTCATGTACTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCACTGGAACTCCAGTCTAGTATCCATCTGCGTGACTCATGTACTC  100

seq1  AGAAGGAAAATGAATTTTAAACTTAGCACATCCTAAACAGGACCCTTGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGAAAATGAATTTTAAACTTAGCACATCCTAAACAGGACCCTTGCC  150

seq1  CACTTATAAACTGCTATGTCTGCTGTCCCTCGCCATCTCAGAGGCAGCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTATAAACTGCTATGTCTGCTGTCCCTCGCCATCTCAGAGGCAGCAG  200

seq1  TCACTCTATCCAGCTGCTCAGCTGAAACCTCTGGTCGTTCTGAACAAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCTATCCAGCTGCTCAGCTGAAACCTCTGGTCGTTCTGAACAAGAA  250

seq1  TGACTTTGGTTGCTGTTGTCAAAGTTTCACTTTGGGCCTGGCCTGGAACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTTGGTTGCTGTTGTCAAAGTTTCACTTTGGGCCTGGCCTGGAACT  300

seq1  GGAGAGCCTCCTGCCTCAACTCCTGAGTCCTGGGATTGTCTGCACACCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGCCTCCTGCCTCAACTCCTGAGTCCTGGGATTGTCTGCACACCAT  350

seq1  CTGTCAGAGGTGCTCTCTAACCTGCCCTTTGGGTCTCAGAGAATCCTGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCAGAGGTGCTCTCTAACCTGCCCTTTGGGTCTCAGAGAATCCTGTT  400

seq1  CGTTTGAACACAGAGGCATCTAGAATTCAAACCCTTCTCAGTGTCCCATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTTGAACACAGAGGCATCTAGAATTCAAACCCTTCTCAGTGTCCCATC  450

seq1  ACCCCGGGTCATGCTTCTGGCTACTATTTATCTTTTGCTTGTCTCTTTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCGGGTCATGCTTCTGGCTACTATTTATCTTTTGCTTGTCTCTTTTG  500

seq1  AAATTGCCTCCTGCTGATTCCCTACCATTCAGTGACCAGATTATTTGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGCCTCCTGCTGATTCCCTACCATTCAGTGACCAGATTATTTGAAA  550

seq1  ACACGAGTGAAGTCTGTCTATGCCCTACCGCAAGTCCTTCAAAGCTTCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACGAGTGAAGTCTGTCTATGCCCTACCGCAAGTCCTTCAAAGCTTCCT  600

seq1  CACTTAAGGCCTTACAGAAACCCGCGGGGCTCTACAGTTTGCACCAGTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTAAGGCCTTACAGAAACCCGCGGGGCTCTACAGTTTGCACCAGTGC  650

seq1  CCAGTTACTCTCTGGCCACACTGCTTTCCTAGCTCCTCAGTGGACACACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTACTCTCTGGCCACACTGCTTTCCTAGCTCCTCAGTGGACACACT  700

seq1  CGTGTCTCCTCTATCACGGTCTATAGCTGTGCCTTCACCCTTATGCCCAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTCTCCTCTATCACGGTCTATAGCTGTGCCTTCACCCTTATGCCCAC  750

seq1  CCCCTCGCCATCTACATCTTTAAACCCAGAGAGCTCCACTCTACTTTCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCGCCATCTACATCTTTAAACCCAGAGAGCTCCACTCTACTTTCCC  800

seq1  CATCCACCTGCAAAGAGTGCCATCTCTCTCCGCACACCAAAGGAGTCACC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCACCTGCAAAGAGTGCCATCTCTCTCCGCACACCAAAGGAGTCACC  850

seq1  GTGACTCTCAAAGTAGGACGCTCTAGGAGGCAGGAAAATTTGCCTGCTCT  900
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GTGACTCTCAAAGTAGGACGCTTTAGGAGGCAGGAAAATTTGCCTGCTCT  900

seq1  GTCTCTGCCTTGTCCTCTCTGTCTAGGTCCCTGTCTCTACTGTTGTAGGC  950
      ||||||| ||||||||||||||||||||||||||||||||||||||||| 
seq2  GTCTCTG-CTTGTCCTCTCTGTCTAGGTCCCTGTCTCTACTGTTGTAGG-  948

seq1  CTGAGGCTGAGGTTAAAGAAACCGACCCATAGGAAAATGGTTTAAAAAGG  1000
      |||| ||||||| ||||| |||||||||||| ||||||||||   |||||
seq2  CTGA-GCTGAGG-TAAAG-AACCGACCCATA-GAAAATGGTT---AAAGG  991

seq1  GGTTAGGATATGGGAGGAAAAAGTGGAAGCCAATCTG  1037
      || |||||||| |||||  ||||| |||||| |||||
seq2  GG-TAGGATAT-GGAGG--AAAGT-GAAGCC-ATCTG  1022

seq1: chr12_25354532_25355495
seq2: B6Ng01-021J05.g_70_1025 (reverse)

seq1  GGAAGCACTTCAGGCTCCTCCCCATACTTACTCAGAGGCACAGCTGTCTT  50
      ||||||| || ||||| || ||||| |||| ||||||||||||| |||||
seq2  GGAAGCA-TTAAGGCT-CTTCCCAT-CTTA-TCAGAGGCACAGC-GTCTT  45

seq1  CAGGGTTGCCTTTAACCTTCTTCTCTGGGGACACCTTGAGCAGGAAGATA  100
      |||||||||| ||||||||| ||||||||  | ||||||||| |||||||
seq2  CAGGGTTGCC-TTAACCTTC-TCTCTGGG--CCCCTTGAGCA-GAAGATA  90

seq1  GGAAAAGGCATCAAAAACTTGTCACCAGTATAGAGGATCAACACTCTGGC  150
      |  ||||||||| ||||||||||||||||||| |||| | ||||||||||
seq2  G--AAAGGCATC-AAAACTTGTCACCAGTATA-AGGA-CCACACTCTGGC  135

seq1  TTTATGGAGGAGTCAACAGCCACCGTGTTTAAATC-AGAGTCTGTAAACA  199
      ||||||||||||||||||||||||||||||||||| ||||||||| ||||
seq2  TTTATGGAGGAGTCAACAGCCACCGTGTTTAAATCAAGAGTCTGT-AACA  184

seq1  TCAGGATGGAGCCTCTTCCCTTGGACTCTGGAGCCCCAAATTACCCATTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGATGGAGCCTCTTCCCTTGGACTCTGGAGCCCCAAATTACCCATTT  234

seq1  TGC-AGTCAAG-AAAACTGAGGCTGTGGAAGAGACTTATAAAACTCAAAA  297
      ||| ||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TGCAAGTCAAGAAAAACTGAGGCTGTGGAAGAGACTTATAAAACTCAAAA  284

seq1  AATGAAC-AAAAAGAAAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAA  346
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAACAAAAAAGAAAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAA  334

seq1  AGAGAGAGAGAGAGAG----AGAAAGAAAGAAAGAAAGAAAGAAAGAAAG  392
      ||||||||||||||||    ||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG  384

seq1  AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA  434

seq1  AGAAAGAAAGAAAGAAAGAAACAGCAGCACTGAGATTGGGTCTCTTGCCT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAAAGAAAGAAAGAAACAGCAGCACTGAGATTGGGTCTCTTGCCT  484

seq1  CCCAGCTGCCACCACTTAGGGGTTCATTCTGTCTCTCACCTCGAGACATC  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCTGCCACCACTTAGGGGTTCATTCTGTCTCTCACCTCGAGACATC  534

seq1  AGTGTCCCAATGTGCCTAGCATGAGACCATCCTATCCCTACCTCCAGGGA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCCCAATGTGCCTAGCATGAGACCATCCTATCCCTACCTCCAGGGA  584

seq1  TCATATCACCCAGCCTCAAGAGCCCTATACCTTCCCTTCAGCAAGTATGC  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATCACCCAGCCTCAAGAGCCCTATACCTTCCCTTCAGCAAGTATGC  634

seq1  ACTGAGTTCATGTTTACCCTGGGCATGAAAGAAAGATGAAATTTCACGAC  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGTTCATGTTTACCCTGGGCATGAAAGAAAGATGAAATTTCACGAC  684

seq1  CTGTAAGTCATATAAAGTACTCAGAAATTGCTGGTTGTTTGTGAGCCTAG  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAAGTCATATAAAGTACTCAGAAATTGCTGGTTGTTTGTGAGCCTAG  734

seq1  AGGCTGCCTGGGGCTGAGAACAAAGAAAAAGAAACCCGGGTATGCCCCGT  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGCCTGGGGCTGAGAACAAAGAAAAAGAAACCCGGGTATGCCCCGT  784

seq1  AGTTAAAACATTCTTGGGAACATCTTGTCCATTAAGATAAAGAGGAATGT  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAAAACATTCTTGGGAACATCTTGTCCATTAAGATAAAGAGGAATGT  834

seq1  GAGGACATAACTGGGCTATCTGAACTGAGTCAACAACTCGCAGAACTCTG  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGACATAACTGGGCTATCTGAACTGAGTCAACAACTCGCAGAACTCTG  884

seq1  ACACCCTGCACGTACATGTAATTTTTCTGCTGATGTTTGAATAAGCCAAT  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCCTGCACGTACATGTAATTTTTCTGCTGATGTTTGAATAAGCCAAT  934

seq1  AGTGTGTCGCTATGCTGAATTC  964
      ||||||||||||||||||||||
seq2  AGTGTGTCGCTATGCTGAATTC  956