BAC Information

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BAC

Clone NameB6Ng01-022D01
Chromosome12 (Build37)
Map Location 115,943,421 - 115,943,994
singlet/doubletsinglet
Overlap geneIgh
Upstream geneIghv2-6, Ighv5-9-1, EG628098, Ighv2-9-1, Ighv5-13, Ighv2-6-8, EG629785, Ighv2-7, LOC668405, Ighv5-15, Ighv5-16, Ighv5-17, Ighv5-18, Ighv2-8, Ighv2-9, Ighv5-19, Ighv7-1, Ighv7-2, Ighv14-1, Ighv4-1, Ighv3-1, Ighv11-1, Ighv14-2, Ighv4-2, Ighv3-2, Ighv11-2, Ighv14-3, EG629812, Ighv6-2, Ighv9-1, Ighv12-1, EG629818, Ighv12-2, Ighv9-3, Ighv7-3, Ighv15-1, Ighv14-4, EG668438, Ighv7-4, EG629833, EG633457, Ighv13-1, Ighv3-6, EG636260, Ighv3-7, Ighv5-21, Ighv3-8, Ighv8-1, Ighv1-1, Ighv13-2, EG435321, Ighv6-3, EG628398, EG639510, Ighv6-6, EG432701, EG629849, Ighv1-2, Ighv10-1, Ighv1-3, Ighv1-4, Ighv10-2, EG668469, EG380809, Ighv1-6, EG668474, Ighv10-4, Ighv1-8, Ighv15-2, Ighv1-9, Ighv1-10, Ighv1-11, EG629860, Ighv1-13, Ighv1-14, Ighv1-15, EG629866, Ighv1-17-1, Ighv1-17, Ighv1-18, EG668493
Downstream geneIghv1-19, EG668497, Ighv1-21-1, Ighv1-21, Ighv1-22, Ighv1-23, Ighv1-24, Ighv1-25, Ighv1-26, Ighv1-27, Ighv1-28, Ighv1-29, Ighv1-30, Ighv1-31, Ighv1-32, Ighv1-33, Ighv1-34, EG668515, Ighv1-36, Ighv1-37, Ighv1-38, Ighv1-39, Ighv1-40, Ighv1-41, EG629906, EG629908, Ighv1-44, Ighv1-45, Ighv1-46, Ighv1-47, Ighv8-3, EG629919, Ighv1-48, Ighv1-49, EG640506, Ighv1-50, Ighv1-51, Ighv1-52, Ighv1-53, EG629930, EG668534, EG211331, Ighv1-55, EG634662, Ighv1-56, EG629936, Ighv8-7, Ighv1-57, Ighv8-8, Ighv1-58, EG432708, Ighv1-60, Ighv1-61, Ighv1-62, EG668544, EG238448, EG668549, EG432709, EG668552, Ighv1-63, Ighv1-64, Ighv8-10, Ighv1-65, EG668554, EG636462, LOC217924, Ighv1-66, EG435328, Ighv1-68, LOC435329, EG668563, Ighv1-69, Ighv8-12, LOC619863, EG638634
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-022D01.bB6Ng01-022D01.g
ACCDH854477DH854478
length883568
definitionDH854477|Mus musculus domesticus DNA, BAC clone: B6Ng01-022D01, 5' end.DH854478|Mus musculus domesticus DNA, BAC clone: B6Ng01-022D01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgagccccatcttttaaaggggttatttgatt
ttctggagtccaccctcttgagttctttatatatattggatattagtccc
ctatctgatttaagataggtaaagatcctttcccaatctgttgatggcct
ttttgtcttattgacggtgtcttttgccttgcagaagctttgcagtttca
tgaggtcccatttgtcaatccctgatcttacagcacaagccattgctgtt
ctattcagaatgatatgtactcactgataagtggatattagtccagaaac
ttagtatagtgagatataaggtacaatttgcaaaacacatgaaactgaag
aagaacgaagaccaaagtgtggacactttgccccttcttagaattggaaa
caatcacccatggaaggagttacagagacaaagtttttagctgagacaaa
aggatggaccatctagagactgtcatatccagggatccatcctataatta
gcctccaaacgatgacaccattgcatacatcgcaagcgtttgatgcaagg
accgtgatatagctgtctcttgtgagactaggccggggcctagcaaacac
agaagtggatgctcacagtcaactattggatggatcacagggcccccaaa
ggaggagctagagaaagatccaaggagctaaagagacctgcaaccctgta
ggtgcaacattatgaactaaccagtactccggagctcttgtctctagctg
catatgtatcaaaagatggcctagtcggccatcactggaaagagaggccc
attggacacacaaactttatatgccccagtacaggggaacgccagggcca
aaaaatgggaatgggtggtggggtaaggggaag
tagagggatgggtcaagtgtggatatatggtttaagggagcaacatacag
aatcagaagcaggtttgatgagataggagttttgtgcaggggaaccagag
aaatgagataacatttgatatgtaaataaatataataaccaataaagaag
acttgctcattatattgtaagagagacatatttgaatgtcccaaggaaaa
ccagagagacagagtgaaggtaggaatggtcatagtacattattcaaatc
atggaaccacacataaatgaaaacatgaagcatttgtttctacggacctg
gttgtcatcatagagcaactattccatgttcttatagataagtatacaca
taaagttcatgggtttaccctgaggaatatttcattgtctataagccaga
caatgtcagtgtttatttgtcctttgttaggaaattaaatggattccatt
tcccagtttcagtgaatgaagaagcaataaacatggatgtgtaactgtct
ttgtaataatatagagttatttgagtagatgtttgggagagatgtagctg
ggacacagcacagtttaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_115943421_115943994
seq2: B6Ng01-022D01.g_69_642 (reverse)

seq1  TTAAACTGTGCTGTGTCCCAGCTACATCTCTCCCAAACATCTACTCAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACTGTGCTGTGTCCCAGCTACATCTCTCCCAAACATCTACTCAAAT  50

seq1  AACTCTATATTATTACAAAGACAGTTACACATCCATGTTTATTGCTTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTATATTATTACAAAGACAGTTACACATCCATGTTTATTGCTTCTT  100

seq1  CATTCACTGAAACTGGGAAATGGAATCCATTTAATTTCCTAACAAAGGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCACTGAAACTGGGAAATGGAATCCATTTAATTTCCTAACAAAGGAC  150

seq1  AAATAAACACTGACATTGTCTGGCTTATAGACAATGAAATATTCCTCAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAACACTGACATTGTCTGGCTTATAGACAATGAAATATTCCTCAGG  200

seq1  GTAAACCCATGAACTTTATGTGTATACTTATCTATAAGAACATGGAATAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACCCATGAACTTTATGTGTATACTTATCTATAAGAACATGGAATAG  250

seq1  TTGCTCTATGATGACAACCAGGTCCGTAGAAACAAATGCTTCATGTTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCTATGATGACAACCAGGTCCGTAGAAACAAATGCTTCATGTTTTC  300

seq1  ATTTATGTGTGGTTCCATGATTTGAATAATGTACTATGACCATTCCTACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATGTGTGGTTCCATGATTTGAATAATGTACTATGACCATTCCTACC  350

seq1  TTCACTCTGTCTCTCTGGTTTTCCTTGGGACATTCAAATATGTCTCTCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTCTGTCTCTCTGGTTTTCCTTGGGACATTCAAATATGTCTCTCTT  400

seq1  ACAATATAATGAGCAAGTCTTCTTTATTGGTTATTATATTTATTTACATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATATAATGAGCAAGTCTTCTTTATTGGTTATTATATTTATTTACATA  450

seq1  TCAAATGTTATCTCATTTCTCTGGTTCCCCTGCACAAAACTCCTATCTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATGTTATCTCATTTCTCTGGTTCCCCTGCACAAAACTCCTATCTCA  500

seq1  TCAAACCTGCTTCTGATTCTGTATGTTGCTCCCTTAAACCATATATCCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACCTGCTTCTGATTCTGTATGTTGCTCCCTTAAACCATATATCCAC  550

seq1  ACTTGACCCATCCCTCTAGAATTC  574
      ||||||||||||||||||||||||
seq2  ACTTGACCCATCCCTCTAGAATTC  574