MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-024A09
Chromosome	12 (Build37)
Map Location	33,235,921 - 33,237,020
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Slc26a4, LOC100043531, Bcap29, Dus4l, LOC100043081, Gpr22, Hbp1, Prkar2b, Pik3cg, 2010109K11Rik
Downstream gene	LOC100043548, Pbef1, LOC100043553, 4933406C10Rik, Sypl, LOC100043109, 1110049B09Rik, Atxn7l4, Atxn7l1, 4930504H06Rik, Twistnb, LOC668801
Link	Open Mouse BAC browser

Click to get alignment info.

name	Slc26a4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:23985 MGI:1346029
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043531 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043531
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	Bcap29 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12033 MGI:101917
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dus4l (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71916 MGI:1919166
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043081 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043081
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs

name	Gpr22 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73010 MGI:1920260
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hbp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73389 MGI:894659
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Prkar2b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19088 MGI:97760
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pik3cg (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:30955 MGI:1353576
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2010109K11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72123 MGI:1919373
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 73 ESTs, 2 Proteins

name	LOC100043548 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043548
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 3 ESTs, 1 Protein

name	Pbef1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:59027 MGI:1929865
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043553 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043553
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	4933406C10Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74076 MGI:1921326
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs

name	Sypl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19027 MGI:108081
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC100043109 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043109
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	1110049B09Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68764 MGI:1916014
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Atxn7l4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72174 MGI:1919424
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Atxn7l1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:380753 MGI:3584458
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930504H06Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75040 MGI:1922290
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 6 ESTs, 1 Protein

name	Twistnb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:28071 MGI:106292
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668801 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668801
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	Slc26a4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142364167 GeneID:23985 MGI:1346029
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 26, member 4 transcript_id : NM_011867.2

name	LOC100043531 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262912 GeneID:100043531
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100043531 transcript_id : XM_001480750.1

name	Bcap29 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982865 GeneID:12033 MGI:101917
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : B-cell receptor-associated protein 29 transcript_id : NM_007530.2

name	Dus4l (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801159 GeneID:71916 MGI:1919166
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dihydrouridine synthase 4-like (S. cerevisiae) transcript_id : NM_028002.2

name	LOC100043081 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262833 GeneID:100043081
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs product : hypothetical protein LOC100043081 transcript_id : XM_001479458.1

name	Gpr22 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801648 GeneID:73010 MGI:1920260
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : G protein-coupled receptor 22 transcript_id : NM_175191.3

name	Hbp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23397422 GeneID:73389 MGI:894659
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : high mobility group box transcription factor 1 transcript_id : NM_153198.1

name	Hbp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:29568078 GeneID:73389 MGI:894659
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : high mobility group box transcription factor 1 transcript_id : NM_177993.1

name	Prkar2b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:89179324 GeneID:19088 MGI:97760
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein kinase, cAMP dependent regulatory, type II beta transcript_id : NM_011158.3

name	Pik3cg (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:9937983 GeneID:30955 MGI:1353576
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphoinositide-3-kinase, catalytic, gamma polypeptide transcript_id : NM_020272.1

name	LOC100043548 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262915 GeneID:100043548
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 3 ESTs, 1 Protein product : hypothetical protein LOC100043548 transcript_id : XM_001480771.1

name	Pbef1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:10946947 GeneID:59027 MGI:1929865
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pre-B-cell colony-enhancing factor 1 transcript_id : NM_021524.1

name	LOC100043553 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262917 GeneID:100043553
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100043553 transcript_id : XM_001480775.1

name	4933406C10Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149262919 GeneID:74076 MGI:1921326
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs product : RIKEN cDNA 4933406C10 gene transcript_id : XM_001480777.1

name	Sypl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:26251301 GeneID:19027 MGI:108081
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : synaptophysin-like protein transcript_id : NM_013635.2

name	Sypl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130909 GeneID:19027 MGI:108081
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : synaptophysin-like protein transcript_id : NM_198710.2

name	LOC100043109 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262836 GeneID:100043109
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : hypothetical protein LOC100043109 transcript_id : XM_001479508.1

name	1110049B09Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:67846106 GeneID:68764 MGI:1916014
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1110049B09 gene transcript_id : NM_001024478.1

name	Atxn7l4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802259 GeneID:72174 MGI:1919424
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ataxin 7-like 4 transcript_id : NM_028139.2

name	Atxn7l1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:75677459 GeneID:380753 MGI:3584458
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ataxin 7-like 1 transcript_id : NM_001033436.1

name	4930504H06Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94392530 GeneID:75040 MGI:1922290
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 6 ESTs, 1 Protein product : RIKEN cDNA 4930504H06 gene transcript_id : XM_126856.3

name	Twistnb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85861256 GeneID:28071 MGI:106292
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : TWIST neighbor transcript_id : NM_172253.2

name	Slc26a4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755022 GeneID:23985 MGI:1346029
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008509 - anion transporter activity [Evidence ISS]; GO:0031404 - chloride ion binding [Evidence IEA]; GO:0008271 - sulfate porter activity [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0009887 - organ morphogenesis [Evidence ISS]; GO:0008272 - sulfate transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : Pendred's syndrome; Pendred syndrome homolog product : pendrin protein_id : NP_035997.1

name	LOC100043531 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262913 GeneID:100043531
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480800.1

name	Bcap29 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6671620 CCDS:CCDS25864.1 GeneID:12033 MGI:101917
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA] GO_function : GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0006888 - ER to Golgi vesicle-mediated transport [Evidence IEA]; GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA] codon_start : 1 product : B-cell receptor-associated protein 29 protein_id : NP_031556.1

name	Dus4l (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312100 CCDS:CCDS25865.1 GeneID:71916 MGI:1919166
definition	GO_function : GO:0050660 - FAD binding [Evidence IEA]; GO:0004425 - indole-3-glycerol-phosphate synthase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0008033 - tRNA processing [Evidence IEA]; GO:0006568 - tryptophan metabolism [Evidence IEA] codon_start : 1 product : dihydrouridine synthase 4-like protein_id : NP_082278.1

name	LOC100043081 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262834 GeneID:100043081
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479508.1

name	Gpr22 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30424810 CCDS:CCDS25866.1 GeneID:73010 MGI:1920260
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : G protein-coupled receptor 22 protein_id : NP_780400.1

name	Hbp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23397423 CCDS:CCDS25867.1 GeneID:73389 MGI:894659
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0016055 - Wnt receptor signaling pathway [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : high mobility group box transcription factor 1 isoform 1 protein_id : NP_694878.1

name	Hbp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29568079 CCDS:CCDS25868.1 GeneID:73389 MGI:894659
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0016055 - Wnt receptor signaling pathway [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : high mobility group box transcription factor 1 isoform 2 protein_id : NP_818774.1

name	Prkar2b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:45598396 CCDS:CCDS25869.1 GeneID:19088 MGI:97760
definition	GO_function : GO:0030552 - cAMP binding [Evidence IEA]; GO:0008603 - cAMP-dependent protein kinase regulator activity [Evidence IDA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA] GO_process : GO:0008283 - cell proliferation [Evidence TAS]; GO:0006631 - fatty acid metabolism [Evidence IMP]; GO:0007612 - learning [Evidence IMP]; GO:0009887 - organ morphogenesis [Evidence TAS]; GO:0006468 - protein amino acid phosphorylation [Evidence TAS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : protein kinase, cAMP dependent regulatory, type II beta protein_id : NP_035288.2

name	Pik3cg (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9937984 CCDS:CCDS25870.1 GeneID:30955 MGI:1353576
definition	GO_component : GO:0005942 - phosphoinositide 3-kinase complex [Evidence IEA] GO_function : GO:0004428 - inositol or phosphatidylinositol kinase activity [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0016303 - phosphatidylinositol 3-kinase activity [Evidence IEA]; GO:0046934 - phosphatidylinositol-4,5-bisphosphate 3-kinase activity [Evidence IEA]; GO:0016773 - phosphotransferase activity, alcohol group as acceptor [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0043066 - negative regulation of apoptosis [Evidence IDA]; GO:0006468 - protein amino acid phosphorylation [Evidence IDA] codon_start : 1 exception : mismatches in translation note : PI3K; PI(3)Kgamma product : phosphoinositide-3-kinase, catalytic, gamma polypeptide protein_id : NP_064668.1

name	LOC100043548 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262916 GeneID:100043548
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480821.1

name	Pbef1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10946948 CCDS:CCDS25871.1 GeneID:59027 MGI:1929865
definition	EC_number : 2.4.2.12 GO_component : GO:0005737 - cytoplasm [Evidence IDA] GO_function : GO:0047280 - nicotinamide phosphoribosyltransferase activity [Evidence IDA]; GO:0004516 - nicotinate phosphoribosyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA] GO_process : GO:0009435 - NAD biosynthesis [Evidence IDA]; GO:0019363 - pyridine nucleotide biosynthesis [Evidence IEA] codon_start : 1 exception : mismatches in translation note : nicotinamide phosphoribosyltransferase product : pre-B-cell colony-enhancing factor 1 protein_id : NP_067499.1

name	LOC100043553 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262918 GeneID:100043553
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480825.1

name	4933406C10Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149262920 GeneID:74076 MGI:1921326
definition	codon_start : 1 product : hypothetical protein LOC74076 protein_id : XP_001480827.1

name	Sypl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305403 CCDS:CCDS25872.1 GeneID:19027 MGI:108081
definition	GO_component : GO:0016020 - membrane [Evidence IDA]; GO:0030141 - secretory granule [Evidence IDA] codon_start : 1 exception : mismatches in translation note : isoform 1 is encoded by transcript variant 1 product : pantophysin isoform 1 protein_id : NP_038663.1

name	Sypl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:41282044 CCDS:CCDS25873.1 GeneID:19027 MGI:108081
definition	GO_component : GO:0016020 - membrane [Evidence IDA]; GO:0030141 - secretory granule [Evidence IDA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : pantophysin isoform 2 protein_id : NP_942003.1

name	LOC100043109 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262837 GeneID:100043109
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479558.1

name	1110049B09Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:67846107 GeneID:68764 MGI:1916014
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA] GO_process : GO:0007156 - homophilic cell adhesion [Evidence IEA] codon_start : 1 product : hypothetical protein LOC68764 protein_id : NP_001019649.1

name	Atxn7l4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312374 CCDS:CCDS25874.1 GeneID:72174 MGI:1919424
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : ataxin 7-like 4 protein_id : NP_082415.1

name	Atxn7l1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:75677460 CCDS:CCDS25875.1 GeneID:380753 MGI:3584458
definition	codon_start : 1 exception : mismatches in translation product : ataxin 7-like 1 protein_id : NP_001028608.1

name	4930504H06Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20847939 GeneID:75040 MGI:1922290
definition	codon_start : 1 product : hypothetical protein LOC75040 protein_id : XP_126856.1

name	Twistnb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27545207 CCDS:CCDS25877.1 GeneID:28071 MGI:106292
definition	GO_function : GO:0003899 - DNA-directed RNA polymerase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA] GO_process : GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : TWIST neighbor protein_id : NP_758457.1

name	LOC668801 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668801
definition	number : 2 pseudo : _no_value

name	LOC668801 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668801
definition	number : 1 pseudo : _no_value

name	2010109K11Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149262914 GeneID:72123 MGI:1919373
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 73 ESTs, 2 Proteins product : RIKEN cDNA 2010109K11 gene transcript_id : XR_035455.1

clone name	MSMg01-522I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-049F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-456I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-085G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288B15
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-521B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-121H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-188D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-199D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-533E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372M24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-213L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-169L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-296N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-189D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-170F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-158O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-149M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-048M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-068F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075I17
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-522I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-171H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-429M19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-343K20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-102H19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-431H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297C24
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-135C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-302M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-115J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444E15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547H19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-319J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063G07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-484K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098I05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-089N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-092D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-291N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-168H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003D19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004B05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042K19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046N17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054A01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059A12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062M15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-065B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-067H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097M04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098D08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102F15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110E08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113H03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159H10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082N17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162I03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291B05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340A19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-267P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217E08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150B14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268N04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-241J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005L16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-067O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-051D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116L09
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-024A09.b	B6Ng01-024A09.g
ACC	DH855781	DH855782
length	1,275	1,086
definition	DH855781\|Mus musculus domesticus DNA, BAC clone: B6Ng01-024A09, 5' end.	DH855782\|Mus musculus domesticus DNA, BAC clone: B6Ng01-024A09, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctaccagacgttcaaaaaggaggaaataccaaaaaatactcctca attatttcacaaaatattgctaaatgtattttatgagtccacagtcacag tcaccttgatacccaaatcacacaaagactcaacattgaaagataatttc caacaagttttcctataaacattgatacaaaaatactcagtaaaagactt gcaaactgaatggaagagcacatgaaaaagatgacccagcacagtcaaag caggcttcaccccagcgaagcaggcgtggtccggcatctgacaatctctt agtgtgatccaccatagaaacaaattgagagaaagaaaaccatgagcatc ttattggatgctgacaaggtctttgacaaaatctaacatcctttcatgat taaagtcctggagagatcagggttaaaggcccatacctaaacataataaa ggcaaaacaaaacaaaacaaaaaacaaaaacaaacaaaataaaaacaaaa acaaaaacaaaaaaaacccagcaagccaatagccaacatcaaattaaatc gagggaaacttaaagcaatttcagtaaaatcagggacaagacaaggctgt ccactttctctccttatctattcaatatagttctttaggttttagctaga gcaataagacaagaaaaggacatcaagggggatacaaactggaaagaaag aagccaaagtattgttatttacagatgatatgatagtatacataaatgac tccaaaaattctaccagggaattcctatgactgataagcaccttcagtga agcagctggatacagcactaactaaaaaacaaaaacaaaaccaaacagca aaaaaagtatacctcccatatacaaagaataatcagcttgagaatgaaat taaggagacaacacctttcacaattgccacaaataatgtaaaacattttg ggtttaactaaccaagcaagttaaagaccaagtatggaaaggacctcaag tctttgaagtaagaaactgtagatgatatagagatggaaaccttctcagt ttatgtatcagtaggatacatagtaaaaatggtcatctttaccaaagcat ctacaattcaatgcatttcatttaaaaacaaaccactttaagactgtaag gccttctcacttcatatgaaaaaccagccagaatgccaaagaatcgtcca taatgaactctctaaggtttccatcttatcagcgttacaagatactaagt aataaactccacataggatgatgca	gaattcacttgttggaaactgtgttagatggaacaaggccaatgaaagat gcttacaaggaggaaaaggggagaaggctcaacagcctttgcctgtgcga agcatttaaagagaaagaatggtgggaagggaaattgaaggagtcaccta cctacaggaagagatttctacgttccaagggaggtgctgagaagaaaccc caagctgcactcatatgggctgcctcccagagccacaaccagagcctcaa tctctctgacttactcaggtagctgtcagagacaggaaacagaacctcat atggttgcacatagaaaaaaataaatacagggagcgttttttttttcact tttttattagatattttctttatatacatttcaaatttcaaatgctatcc tgaaagttccctataccctcccgccaccctgttcccctacccgctcactc ctgcttcttggccctggcattcccctgtactggggcatataaagttcgcg ataccaaggggcctctcttcccagtgatggccaactaggctatcttctgc tacataagcagctagagacacgagctccggggtactggttagttcatatt tttgttccacctatagggttgcagaccccttcagcttcttgggtgctttc tctagcttctccactgggggccctgtgttccatcttatagatgactgtga atatccacttctgtatttgtcaggcactggcatagcctcatacgagacag ctgtaccagggtcccttcatcaaaatcttgctggcatatgcagtcataca actggagtgcatcttcagtcacccctggactcaccaataatctgttttgt ctctggcttcctagcttgcctgcaacatcctcccctcaggagaagctcct taaagtgaaacactcctctcctacaactagctgcttgactaagagaggct ggttaatagagagttgatgacccgaacttagacagaggagcttctgtctt ttccacctgccgaccatcagattctcagctccctccagatcctgctttgt ccgttccgcacccttctgtacttcatccgcatactc
quality values	Open. Hide. 53 61 19 36 61 61 61 43 55 36 13 50 61 55 55 61 55 49 43 52 52 52 55 61 59 59 19 31 25 18 18 18 19 18 19 11 13 30 50 59 59 61 59 55 55 59 59 59 59 59 52 59 61 59 59 55 55 59 59 61 59 59 61 61 61 61 61 61 59 61 61 59 59 59 52 59 43 32 59 52 61 59 55 59 59 55 61 61 61 61 59 61 59 59 59 55 52 61 59 59 59 59 59 61 61 61 61 61 59 61 61 61 61 61 59 59 59 59 37 59 61 59 61 61 59 61 61 61 61 61 61 59 59 61 59 61 61 59 55 61 61 59 59 61 59 55 59 61 61 55 59 59 59 61 59 61 61 59 61 61 61 61 59 61 59 61 59 59 61 61 61 61 59 59 61 61 59 59 59 59 61 61 59 61 61 61 61 61 61 59 61 61 61 61 59 59 61 61 61 61 61 59 59 59 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 55 55 59 59 55 59 61 61 61 59 61 61 61 61 52 61 59 61 59 59 59 61 59 61 59 59 61 61 61 61 61 61 61 61 59 61 61 61 61 59 59 61 59 61 61 52 61 59 59 61 61 59 61 61 59 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 59 61 61 61 59 61 61 59 61 61 59 59 61 61 55 61 61 59 61 61 61 61 61 61 52 59 61 59 52 61 59 61 61 61 61 61 61 61 59 59 61 61 61 59 59 59 61 59 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 59 59 59 59 59 61 59 61 61 59 61 59 61 61 59 61 61 61 61 61 61 61 55 55 55 55 55 52 52 41 52 52 52 55 55 55 61 52 55 61 61 61 55 55 55 55 55 55 61 61 61 61 52 55 55 55 55 55 43 52 52 52 50 61 55 50 49 49 50 50 49 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 50 61 61 61 61 61 61 61 61 61 61 61 61 61 52 50 50 47 53 53 61 61 61 61 61 50 61 61 61 61 53 61 61 61 61 61 61 61 47 61 61 53 61 61 61 61 61 53 61 61 53 61 61 38 61 61 53 53 53 61 61 52 43 61 61 61 53 61 52 53 61 61 53 61 61 61 38 42 39 61 50 45 50 42 47 41 52 53 47 53 53 53 45 53 39 57 45 53 42 43 47 53 57 53 47 53 38 57 53 45 38 53 53 52 47 53 57 57 57 57 45 30 45 57 33 57 53 53 53 57 57 57 57 50 38 53 57 57 50 53 57 28 45 53 30 57 57 53 50 50 24 27 32 10 17 27 27 57 43 35 52 27 52 37 26 53 41 29 45 52 57 47 45 53 53 32 38 50 45 50 21 50 53 57 28 53 53 50 42 42 42 38 12 46 43 46 30 17 57 53 38 32 53 45 31 17 57 57 52 30 19 25 26 41 39 50 42 47 42 27 50 53 38 38 38 52 37 39 36 33 52 31 53 40 35 50 37 52 36 39 34 50 33 28 47 50 34 41 31 37 28 36 19 19 30 28 34 22 15 40 31 37 33 32 33 44 45 38 16 8 41 53 36 39 38 21 35 40 37 37 23 5 33 35 38 28 29 35 38 40 53 53 57 57 28 19 32 14 33 29 32 27 37 30 57 31 31 37 29 21 17 29 10 51 30 29 38 31 32 22 30 29 39 35 26 30 24 31 30 29 15 30 41 32 29 21 41 39 28 30 39 31 20 24 21 26 29 13 6 27 26 17 24 15 12 29 37 28 17 25 14 32 29 28 30 25 11 9 19 12 47 23 16 20 36 25 34 9 22 46 43 31 26 25 33 46 41 29 13 16 8 5 5 9 12 10 29 27 26 21 16 38 22 38 28 35 25 27 23 19 43 19 51 30 14 20 11 27 12 29 17 21 19 15 23 31 21 51 23 6 8 39 16 13 22 29 22 28 20 13 17 8 43 31 14 25 15 12 6 36 34 13 16 41 22 17 5 22 10 29 9 28 19 31 10 5 9 41 14 11 32 7 30 19 34 22 20 51 19 19 17 7 10 22 11 24 7 25 7 15 7 7 10 39 9 26 15 23 19 13 9 9 17 15 12 10 6 5 5 12 20 18 14 30 32 35 18 22 10 30 33 13 17 16 18 9 8 34 23 13 14 12 10 33 19 10 15 8 7 15 7 5 15 15 29 7 13 23 15 18 6 13 5 11 6 36 7 29 5 7 5 3 4 10 7 6 4 6 3 4 3 3 8 11 4 3 36 3 1 4 7 12 5 5 17 6 23 14 12 5 4 1 1 3 5 8 7 21 10 7 15 11 4 4 6 6 10 18 30 26 26 9 10 7 2 3 3 10 6 16 4 12 10 4 6 8 6 18 6 5 19 20 13 12 1 1 1 3 4 4 18 23 6 5 22 18 4 6 5 16 4 4 3 5 9 6 3 5 4 6 12 4 7 12 14 13 5 19 6 5 3 6 10 5 6 1 3 6 3 6 10 3 8 9 5 11 4 8 4 8 10 9 10 13 4 1 4 13 6 8 13 9 12 4 3 7 4 19 6 4 4 3 3 3	Open. Hide. 50 47 30 49 52 49 14 17 13 9 18 18 20 21 19 27 36 52 52 59 59 59 61 59 52 49 43 59 59 55 59 59 59 59 52 52 59 59 45 59 52 59 59 59 59 59 59 59 61 36 43 36 37 36 36 36 23 31 30 61 59 59 59 61 59 59 59 59 61 59 59 61 59 61 59 59 61 52 59 59 49 49 59 59 49 59 59 61 61 61 61 59 59 59 61 59 59 59 52 61 59 59 59 61 61 61 59 55 55 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 55 61 61 61 59 61 61 59 61 59 59 59 59 59 59 59 59 52 52 61 61 55 43 59 49 59 59 59 59 59 59 52 59 37 59 59 59 59 52 52 59 59 59 61 59 61 59 61 59 59 50 55 36 59 59 49 61 59 59 59 59 59 59 52 59 59 59 59 59 59 49 59 59 59 45 59 52 59 59 59 59 59 59 59 59 59 59 59 59 59 52 45 61 52 59 59 49 59 52 59 59 59 52 49 61 52 59 59 59 59 59 59 59 59 61 61 59 59 59 59 61 59 59 59 52 59 59 59 59 43 59 52 59 49 52 59 59 59 59 52 44 61 49 61 59 59 59 59 59 59 59 59 52 49 61 59 59 59 59 59 52 59 59 59 59 61 52 59 61 59 52 59 52 59 52 41 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 55 55 61 59 59 59 61 61 61 61 61 61 61 61 61 59 59 59 59 61 61 61 61 61 61 61 61 59 59 43 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 59 61 41 52 50 55 55 55 61 55 55 55 55 55 61 55 52 52 61 61 61 55 61 61 55 55 52 55 55 61 61 52 41 52 52 52 52 52 61 61 61 61 61 52 55 61 55 61 61 55 55 61 55 61 61 61 61 55 55 55 55 55 55 55 52 55 55 50 55 55 61 55 50 55 50 55 61 61 55 55 61 55 50 55 55 55 41 41 37 43 47 50 61 61 61 61 61 61 55 55 55 55 61 55 50 50 43 50 50 50 55 50 55 50 47 55 55 55 50 55 50 61 55 50 47 50 49 50 39 61 50 61 47 53 53 61 61 61 61 61 52 50 47 43 35 43 50 47 36 50 47 37 47 50 50 50 53 53 50 61 61 61 43 40 61 61 53 61 53 61 53 47 50 50 37 37 43 61 50 61 53 53 53 52 47 42 53 50 61 50 52 47 35 61 50 53 61 61 61 27 47 42 47 45 52 47 47 25 24 39 43 46 39 43 50 53 53 53 50 50 61 61 61 61 39 38 30 42 39 31 53 53 57 39 39 42 52 57 47 45 52 50 45 50 34 47 34 47 53 53 57 53 53 47 45 52 52 53 53 38 50 57 53 57 42 53 38 45 57 57 57 40 53 53 53 53 53 53 53 53 33 57 38 40 50 52 47 47 47 47 47 38 53 57 45 45 45 50 45 28 53 42 28 50 53 38 52 38 40 37 16 42 38 42 37 17 50 53 17 45 43 31 45 30 45 47 52 38 50 53 57 53 53 52 33 31 36 57 47 38 36 38 36 18 57 21 38 32 39 52 52 28 30 38 27 24 53 52 45 45 31 44 37 38 32 53 34 53 24 42 42 50 44 52 27 23 30 44 30 31 53 52 23 53 57 42 39 34 35 25 36 35 30 36 33 32 21 33 11 46 29 30 41 48 40 22 25 34 35 40 42 32 41 31 24 33 28 41 35 37 27 33 38 36 53 40 41 21 29 30 15 28 28 29 14 29 29 24 18 20 34 30 29 57 46 38 30 43 29 25 15 32 29 15 29 31 27 31 29 15 38 32 33 29 22 10 51 51 30 9 9 31 20 34 23 29 26 15 26 39 43 31 23 35 25 29 34 39 15 8 34 17 29 21 30 18 25 28 20 35 29 28 40 43 46 32 28 12 24 15 24 28 11 19 19 9 20 14 30 29 23 11 11 43 46 14 15 18 15 5 5 13 14 29 26 27 43 29 29 22 8 39 13 21 22 8 32 28 24 21 23 31 30 27 22 20 19 26 24 12 18 35 38 14 26 5 14 7 41 19 19 23 33 6 6 23 14 7 12 8 21 5 20 7 26 18 9 25 7 16 19 13 38 35 9 25 26 25 31 26 6 5 15 11 5 6 7 5 6 7 7 25 28 6 11 8 18 16 22 33 44 44 26 21 7 9 8 26 6 8 5 4 4 4 6 11 22 19 6 3 5 7 14 13 13 31 6 9 7 19 23 9 26 23 5 5 13 5 5 9 8 8 6 14 17 5 23 42 29 17 8 31 27 5 12 10 22 12 5 7 9 5 9 5 9 5 9 9 13 9 3 4 6 9 8 5 4 4 4 4 4 7 5 5 6 7 23

Alignment Information

BAC End 1

BAC End 2

seq1: chr12_33235921_33237020
seq2: B6Ng01-024A09.g_68_1153

seq1  GAATTCACTTGTTGGAAACTGTGTTAGATGGAACAAGGCCAATGAAAGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTGTTGGAAACTGTGTTAGATGGAACAAGGCCAATGAAAGAT  50

seq1  GCTTACAAGGAGGAAAAGGGGAGAAGGCTCAACAGCCTTTGCCTGTGCGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTACAAGGAGGAAAAGGGGAGAAGGCTCAACAGCCTTTGCCTGTGCGA  100

seq1  AGCATTTAAAGAGAAAGAATGGTGGGAAGGGAAATTGAAGGAGTCACCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTTAAAGAGAAAGAATGGTGGGAAGGGAAATTGAAGGAGTCACCTA  150

seq1  CCTACAGGAAGAGATTTCTACGTTCCAAGGGAGGTGCTGAGAAGAAACCC  200
      ||||||||||||||||||||||||||||||||||||              
seq2  CCTACAGGAAGAGATTTCTACGTTCCAAGGGAGGTGNNNNNNNNNNNNNN  200

seq1  CAAGCTGCACTCATATGGGCTGCCTCCCAGAGCCACAACCAGAGCCTCAA  250
         |||||||||||||||||||||||||||||||||||||||||||||||
seq2  NNNGCTGCACTCATATGGGCTGCCTCCCAGAGCCACAACCAGAGCCTCAA  250

seq1  TCTCTCTGACTTACTCAGGTAGCTGTCAGAGACAGGAAACAGAACCTCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTGACTTACTCAGGTAGCTGTCAGAGACAGGAAACAGAACCTCAT  300

seq1  ATGGTTGCACATAGAAAAAAATAAATACAGGGAGCGTTTTTTTTTTCACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTGCACATAGAAAAAAATAAATACAGGGAGCGTTTTTTTTTTCACT  350

seq1  TTTTTATTAGATATTTTCTTTATATACATTTCAAATTTCAAATGCTATCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATTAGATATTTTCTTTATATACATTTCAAATTTCAAATGCTATCC  400

seq1  TGAAAGTTCCCTATACCCTCCCGCCACCCTGTTCCCCTACCCGCTCACTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGTTCCCTATACCCTCCCGCCACCCTGTTCCCCTACCCGCTCACTC  450

seq1  CTGCTTCTTGGCCCTGGCATTCCCCTGTACTGGGGCATATAAAGTTCGCG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTCTTGGCCCTGGCATTCCCCTGTACTGGGGCATATAAAGTTCGCG  500

seq1  ATACCAAGGGGCCTCTCTTCCCAGTGATGGCCAACTAGGCTATCTTCTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCAAGGGGCCTCTCTTCCCAGTGATGGCCAACTAGGCTATCTTCTGC  550

seq1  TACATAAGCAGCTAGAGACACGAGCTCCGGGGTACTGGTTAGTTCATATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAAGCAGCTAGAGACACGAGCTCCGGGGTACTGGTTAGTTCATATT  600

seq1  TTTGTTCCACCTATAGGGTTGCAGACCCCTTCAGCTTCTTGGGTGCTTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTCCACCTATAGGGTTGCAGACCCCTTCAGCTTCTTGGGTGCTTTC  650

seq1  TCTAGCTTCTCCACTGGGGGCCCTGTGTTCCATCTTATAGATGACTGTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGCTTCTCCACTGGGGGCCCTGTGTTCCATCTTATAGATGACTGTGA  700

seq1  ATATCCACTTCTGTATTTGTCAGGCACTGGCATAGCCTCATACGAGACAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCACTTCTGTATTTGTCAGGCACTGGCATAGCCTCATACGAGACAG  750

seq1  CTGTACCAGGGTCCCTTCATCAAAATCTTGCTGGCATATGCAGTCATACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTACCAGGGTCCCTTCATCAAAATCTTGCTGGCATATGCAGTCATACA  800

seq1  ACTGGAGTGCATCTTCAGTCACCCCTGGACTCACCAATAATCTGTTTTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGAGTGCATCTTCAGTCACCCCTGGACTCACCAATAATCTGTTTTGT  850

seq1  CTCTGGCTTCCTAGCTTGCCTGCAACATCCTCCCCTCAAGGAGAAGCTCC  900
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CTCTGGCTTCCTAGCTTGCCTGCAACATCCTCCCCTC-AGGAGAAGCTCC  899

seq1  TTAAAAGTGACACACTCCTCTCCTACAACTAGCTGCTTGACTAAAGAGAG  950
      || ||||||| ||||||||||||||||||||||||||||||| |||||||
seq2  TT-AAAGTGAAACACTCCTCTCCTACAACTAGCTGCTTGACT-AAGAGAG  947

seq1  GCTGGGTAATAGAGAAGTTGAATGACCCGAACTTAGGACAGAGGGAGCTT  1000
      ||||| |||||||| ||||| |||||||||||||| |||||| |||||||
seq2  GCTGGTTAATAGAG-AGTTG-ATGACCCGAACTTA-GACAGA-GGAGCTT  993

seq1  CTGTCTTTTTCCACCTGCAGACCATCGAGTTCTTCAGCTCTCCTCCAGAG  1050
      ||||| |||||||||||| ||||||| || |  ||||||| |||||||| 
seq2  CTGTC-TTTTCCACCTGCCGACCATC-AGATTCTCAGCTC-CCTCCAGA-  1039

seq1  TCCTGCTTTTGTCCCGTTCCCGCACTCTTCTGTACTTCATCAGCATACTC  1100
      |||||| ||||| ||||| |||||| ||||||||||||||| ||||||||
seq2  TCCTGC-TTTGT-CCGTT-CCGCACCCTTCTGTACTTCATCCGCATACTC  1086

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information