BAC Information

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BAC

Clone NameB6Ng01-024B14
Chromosome12 (Build37)
Map Location 87,097,330 - 87,224,958
singlet/doubletdoublet
Overlap geneBC011209, 0610007P14Rik, Ttll5
Upstream geneNpc2, Isca2, Ltbp2, 1110018G07Rik, Fcf1, Ylpm1, Prox2, Dlst, Rps6kl1, LOC100042021, Pgf, Eif2b2, Mlh3, Acyp1, 2810002I04Rik, Nek9, Tmed10, LOC100042549, LOC667119, Fos, EG667124, Jundm2, LOC100042073, Batf
Downstream geneTgfb3, 1700019E19Rik, 1700020O03Rik, LOC100042112, Esrrb, LOC667191, Vash1, Angel1, EG627607, LOC100042650, 6430527G18Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-024B14.bB6Ng01-024B14.g
ACCDH855833DH855834
length1221,170
definitionDH855833|Mus musculus domesticus DNA, BAC clone: B6Ng01-024B14, 5' end.DH855834|Mus musculus domesticus DNA, BAC clone: B6Ng01-024B14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(87,097,330 - 87,097,451)(87,223,779 - 87,224,958)
sequence
gaattccagttctgccttcttttgctctgaagtttaaggggctcttccct
ccccatacatggcctgtggctgtgtataaagacagatgtcctgtgcaggc
atcattgtccatggagggccct
gaattctagaaagggtagagcaaggtcccacaggagaatgaactgagtaa
gagggggaaccctaagagctgaccttttacctcacccacagaatcactat
ggcatctagctagctaacgcctggaacgctaggtctgaaaggagtgtctc
agactgggcgctgtggactcggcagaaacagtgctcttttccaagcctga
tccgctagaaaaaatgatgtcattgttcctgagatccagttccaggacag
cacaggagagtcgagggtgtgagcatgccagaatgggcggactcatcaga
gtcagctttatgtgagtggagaaagggccagatagatggcctcaaatttg
gcctggccatttattagccacatgacccaagacaacttccttaagcttgc
tgactcgttccccttctcaataaccaaggcttttatgatatatggttggt
agtaagtaccaacaatgttgttaaatacaaacagtagcctcttagcacct
atgtcccttctgcagcaaatgcccctccccgtctaaactggagcaaggga
taaactgaagaggggcttaccttcgacactgcccctgccttccattcttt
tactgttggtggagaggtttgcataatggagaaagcatgctaccttcttc
cattcctctgacaatcatttatggacaccttccttttaaagaacatggcc
ttaccctgaaaaatggtcaagagcagaggtaacagaaaactaaaccagac
ttcactcaagagaggtatcctgaacatactttcgttctcagcagacatgg
cactggtctctgatcaagcaggactaagctagtcaggtcagtgtctagtc
cacatgatcccacactagagaggatcaggttcagagcccatcactcaccc
attctcacaaagagtaagccactgtcatcagtgacatctttgaaagacag
ctacactctgttggttttggctgttttctcaaatgtcaaaaaaagttgtt
ctcaagtcggtattcacagtgccatttcttagcattaatattgcctttaa
taaggcttgccattgaagcctatttagttcccatggtaccacatttccca
accctgggagtcagtaaattctgacgtttagaaaacatgtttcatagggg
gaagggctcaaaaactccta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_87097330_87097451
seq2: B6Ng01-024B14.b_42_162

seq1  GAATTCCAGTTCTGCCTTCTTTTGCTCTGAAGGCCAAGGGGCCCAGCCCT  50
      ||||||||||||||||||||||||||||||||   ||||||| |  ||||
seq2  GAATTCCAGTTCTGCCTTCTTTTGCTCTGAAGTTTAAGGGGCTCTTCCCT  50

seq1  CCCCAAACATGGCCATGTGGCTGTGTAGAAAGACAGATGTCCTGTGCAGG  100
      ||||| |||||||| |||||||||||| ||||||||||||||||||||||
seq2  CCCCATACATGGCC-TGTGGCTGTGTATAAAGACAGATGTCCTGTGCAGG  99

seq1  CATCCTTGTCCAGGGAGGGCCC  122
      |||| ||||||| |||||||||
seq2  CATCATTGTCCATGGAGGGCCC  121

seq1: chr12_87223779_87224958
seq2: B6Ng01-024B14.g_69_1238 (reverse)

seq1  TAGGAG-TTTTGAATGCCTCCCCTAATAAAACATG-TTTCTAACAGTCAG  48
      |||||| ||||||   | |||||  || ||||||| |||||||  |||||
seq2  TAGGAGTTTTTGAGCCCTTCCCCCTATGAAACATGTTTTCTAAACGTCAG  50

seq1  ATTTTACTGACTTCCAGGGTTGTGAAAATGTGGTACAATGTGAACT-AAT  97
      | |||||||||| ||||||||| | ||||||||||| ||| ||||| |||
seq2  AATTTACTGACTCCCAGGGTTG-GGAAATGTGGTACCATGGGAACTAAAT  99

seq1  AGGCTTCAATGGCAAGCCTTATTTAAAGGCATATTTAATGCTAAGGAAAT  147
      ||||||||||||||||||||| |||||||||   |||||||||||  || 
seq2  AGGCTTCAATGGCAAGCCTTA-TTAAAGGCAATATTAATGCTAAG--AAA  146

seq1  TGGCACTGTGAAATTACCGACTATGAGAACAACTTTTTTTTGACCATTTG  197
      ||||||||||||  |||||||| |||||||||| ||||||||| ||||||
seq2  TGGCACTGTGAA--TACCGACT-TGAGAACAAC-TTTTTTTGA-CATTTG  191

seq1  AAGAAAAACAGCCAAAACCAACAGAGTGTTAGCTGTCTTTCAAAGATGTC  247
      |   |||||||||||||||||||||||| |||||||||||||||||||||
seq2  A--GAAAACAGCCAAAACCAACAGAGTG-TAGCTGTCTTTCAAAGATGTC  238

seq1  ACTGATGACAGTGGCTTACTCTTTGTGAGAATGGGTGAAGTGATGGGCTC  297
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ACTGATGACAGTGGCTTACTCTTTGTGAGAATGGGTG-AGTGATGGGCTC  287

seq1  TGAACCTGATCCTCTCTAGTGTGGGATCATGTGGACTAGACACTGACCTG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCTGATCCTCTCTAGTGTGGGATCATGTGGACTAGACACTGACCTG  337

seq1  ACTAGCTTAGTCTTGCTTTGATCAGAGACCAGTGCCATGTCTGCTGAGAA  397
      |||||||||||| ||| |||||||||||||||||||||||||||||||||
seq2  ACTAGCTTAGTCCTGC-TTGATCAGAGACCAGTGCCATGTCTGCTGAGAA  386

seq1  CG-AAGTATGTTCAGGATACCTCTCTTGAGTGAAGTCTGGTTTAGTTTTC  446
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAAGTATGTTCAGGATACCTCTCTTGAGTGAAGTCTGGTTTAGTTTTC  436

seq1  TGTTACCTCTGCTCTTGACCATTTTTCAGGGTAAGGCCATGTTCTTTAAA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACCTCTGCTCTTGACCATTTTTCAGGGTAAGGCCATGTTCTTTAAA  486

seq1  AGGAAGGTGTCCATAAATGATTGTCAGAGGAATGGAAGAAGGTAGCATGC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGTGTCCATAAATGATTGTCAGAGGAATGGAAGAAGGTAGCATGC  536

seq1  TTTCTCCATTATGCAAACCTCTCCACCAACAGTAAAAGAATGGAAGGCAG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCCATTATGCAAACCTCTCCACCAACAGTAAAAGAATGGAAGGCAG  586

seq1  GGGCAGTGTCGAAGGTAAGCCCCTCTTCAGTTTATCCCTTGCTCCAGTTT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGTGTCGAAGGTAAGCCCCTCTTCAGTTTATCCCTTGCTCCAGTTT  636

seq1  AGACGGGGAGGGGCATTTGCTGCAGAAGGGACATAGGTGCTAAGAGGCTA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACGGGGAGGGGCATTTGCTGCAGAAGGGACATAGGTGCTAAGAGGCTA  686

seq1  CTGTTTGTATTTAACAACATTGTTGGTACTTACTACCAACCATATATCAT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTGTATTTAACAACATTGTTGGTACTTACTACCAACCATATATCAT  736

seq1  AAAAGCCTTGGTTATTGAGAAGGGGAACGAGTCAGCAAGCTTAAGGAAGT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCCTTGGTTATTGAGAAGGGGAACGAGTCAGCAAGCTTAAGGAAGT  786

seq1  TGTCTTGGGTCATGTGGCTAATAAATGGCCAGGCCAAATTTGAGGCCATC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTGGGTCATGTGGCTAATAAATGGCCAGGCCAAATTTGAGGCCATC  836

seq1  TATCTGGCCCTTTCTCCACTCACATAAAGCTGACTCTGATGAGTCCGCCC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGGCCCTTTCTCCACTCACATAAAGCTGACTCTGATGAGTCCGCCC  886

seq1  ATTCTGGCATGCTCACACCCTCGACTCTCCTGTGCTGTCCTGGAACTGGA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGGCATGCTCACACCCTCGACTCTCCTGTGCTGTCCTGGAACTGGA  936

seq1  TCTCAGGAACAATGACATCATTTTTTCTAGCGGATCAGGCTTGGAAAAGA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGGAACAATGACATCATTTTTTCTAGCGGATCAGGCTTGGAAAAGA  986

seq1  GCACTGTTTCTGCCGAGTCCACAGCGCCCAGTCTGAGACACTCCTTTCAG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGTTTCTGCCGAGTCCACAGCGCCCAGTCTGAGACACTCCTTTCAG  1036

seq1  ACCTAGCGTTCCAGGCGTTAGCTAGCTAGATGCCATAGTGATTCTGTGGG  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAGCGTTCCAGGCGTTAGCTAGCTAGATGCCATAGTGATTCTGTGGG  1086

seq1  TGAGGTAAAAGGTCAGCTCTTAGGGTTCCCCCTCTTACTCAGTTCATTCT  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTAAAAGGTCAGCTCTTAGGGTTCCCCCTCTTACTCAGTTCATTCT  1136

seq1  CCTGTGGGACCTTGCTCTACCCTTTCTAGAATTC  1180
      ||||||||||||||||||||||||||||||||||
seq2  CCTGTGGGACCTTGCTCTACCCTTTCTAGAATTC  1170