BAC Information

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BAC

Clone NameB6Ng01-030G05
Chromosome12 (Build37)
Map Location 67,494,039 - 67,495,080
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040700, EG238217
Downstream geneMdga2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-030G05.bB6Ng01-030G05.g
ACCDH860316DH860317
length1,0881,023
definitionDH860316|Mus musculus domesticus DNA, BAC clone: B6Ng01-030G05, 5' end.DH860317|Mus musculus domesticus DNA, BAC clone: B6Ng01-030G05, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ctttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttctttga
tccatttagatttgaccttagtacaaggagataagtatggatcagttcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gactataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttaccacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctatgttttttgttattccagatg
aatttgcaaattgctccttctaattcgtttaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatcttttccatct
tctgagatcttctttaatttctttcttcagagacttggagtttttatcat
acagatctttcacttccttagttagagtcactcgagatattttatatatt
gtgactattgagaatgtgttgtttccctaatttctttctcagcctgttat
tctttgtgtagagaaggcaatgactgttgagttaatttatattcaactac
ttcccgaaactgttatcaggttaggagctccaggtgga
gaattctgctctgcgaagagggagtagctttatactcttgagacagggta
gccatatatctcagcactgtgaaataaaatgacttagaatatcttttaaa
taagaaatcagatatattaatttactgagaaatttattgtaccataaagt
aatttctcttgagaatttttctgtaaacttaaaaataatttctgtattgc
ttttatttcaagctaaacaagttatttgttgactttgagattaagagaga
actaatccaagaaaatctgggatgcattttaaatctgaaaaacttctaca
taaagtattttactacaaaatagaatgagataaattctttgtctagttat
tatgtccttagagttacacctaaaacaaaataactgttaagttctgtttc
ttatgatatatttttcagccttcaaagagtttgtgtttagctaaaccaag
ggaaattttacttcctctgatgtttgagttgagtaaaactgtcaccatgt
ctcaatatattagagtatggttcaaatcatcaaatgaaattttaatactt
tcaataaacgcagctacactaagccttccctctcttatctctaaaatgaa
tcttatgatttattttatacacatgggacaggggctgtttttgtaaaaac
tagtctgaagatgaaatgaggttcctgctggggttttagaaagggaagtt
gtgctgcaagtgcataacttacaactgactaagtgcttccagacagaaga
cccctgctgtcacagttgtagcccctccccttgcagcttctccaatggag
agtggaatatgttctatttcctctgcatgaaatctctctgtgtatgtcat
gtaagggaattttttttgcttactgacacttagtacatagatttttttag
agtaattttactattttttaagaatctcaagaaatgtatatgcaatcagt
acactagtagatcagagacacttctgctcccatcagctctcgctactttt
tttctatattttaacctcttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_67494039_67495080
seq2: B6Ng01-030G05.g_70_1092 (reverse)

seq1  AAAAAGAGTGTTAAAATATAGAAAAAAAAGTAGCGAGAGCTGATGGGAGA  50
      |||||||| |||||||||||| ||||||||||||||||||||||||||| 
seq2  AAAAAGAG-GTTAAAATATAG-AAAAAAAGTAGCGAGAGCTGATGGGAG-  47

seq1  CAGAAGTGTCTTCCTAGATCTACTAAGTGTACTGATTTGCAATATACATT  100
      |||||||||||  || |||||||| |||||||||| |||| |||||||||
seq2  CAGAAGTGTCT--CT-GATCTACT-AGTGTACTGA-TTGC-ATATACATT  91

seq1  TCCCTGAGATTTCCTTTAAAAAATAGTTAAAATTTACTCTTAAAAAAAAT  150
      | | |||||||    ||||||||||||  ||| |||||||  ||||||||
seq2  T-CTTGAGATT---CTTAAAAAATAGT--AAAATTACTCT--AAAAAAAT  133

seq1  CTATGTACTAAGTGTCAGTTAAGCATAAAAAAATTCCCTTACATGACATA  200
      |||||||||||||||||| |||||| ||||||||||||||||||||||||
seq2  CTATGTACTAAGTGTCAG-TAAGCA-AAAAAAATTCCCTTACATGACATA  181

seq1  CACAGAGAGATTTCATGCAGAGGAAATAGAACATATTCCACTCTCCATTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAGAGATTTCATGCAGAGGAAATAGAACATATTCCACTCTCCATTG  231

seq1  GAGAAGCTGCAAGGGGAGGGGCTACAACTGTGACAGCAGGGGTCTTCTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGCTGCAAGGGGAGGGGCTACAACTGTGACAGCAGGGGTCTTCTGT  281

seq1  CTGGAAGCACTTAGTCAGTTGTAAGTTATGCACTTGCAGCACAACTTCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAGCACTTAGTCAGTTGTAAGTTATGCACTTGCAGCACAACTTCCC  331

seq1  TTTCTAAAACCCCAGCAGGAACCTCATTTCATCTTCAGACTAGTTTTTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAAAACCCCAGCAGGAACCTCATTTCATCTTCAGACTAGTTTTTAC  381

seq1  AAAAACAGCCCCTGTCCCATGTGTATAAAATAAATCATAAGATTCATTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAGCCCCTGTCCCATGTGTATAAAATAAATCATAAGATTCATTTT  431

seq1  AGAGATAAGAGAGGGAAGGCTTAGTGTAGCTGCGTTTATTGAAAGTATTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATAAGAGAGGGAAGGCTTAGTGTAGCTGCGTTTATTGAAAGTATTA  481

seq1  AAATTTCATTTGATGATTTGAACCATACTCTAATATATTGAGACATGGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTCATTTGATGATTTGAACCATACTCTAATATATTGAGACATGGTG  531

seq1  ACAGTTTTACTCAACTCAAACATCAGAGGAAGTAAAATTTCCCTTGGTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTTTACTCAACTCAAACATCAGAGGAAGTAAAATTTCCCTTGGTTT  581

seq1  AGCTAAACACAAACTCTTTGAAGGCTGAAAAATATATCATAAGAAACAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAAACACAAACTCTTTGAAGGCTGAAAAATATATCATAAGAAACAGA  631

seq1  ACTTAACAGTTATTTTGTTTTAGGTGTAACTCTAAGGACATAATAACTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAACAGTTATTTTGTTTTAGGTGTAACTCTAAGGACATAATAACTAG  681

seq1  ACAAAGAATTTATCTCATTCTATTTTGTAGTAAAATACTTTATGTAGAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGAATTTATCTCATTCTATTTTGTAGTAAAATACTTTATGTAGAAG  731

seq1  TTTTTCAGATTTAAAATGCATCCCAGATTTTCTTGGATTAGTTCTCTCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCAGATTTAAAATGCATCCCAGATTTTCTTGGATTAGTTCTCTCTT  781

seq1  AATCTCAAAGTCAACAAATAACTTGTTTAGCTTGAAATAAAAGCAATACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCAAAGTCAACAAATAACTTGTTTAGCTTGAAATAAAAGCAATACA  831

seq1  GAAATTATTTTTAAGTTTACAGAAAAATTCTCAAGAGAAATTACTTTATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTATTTTTAAGTTTACAGAAAAATTCTCAAGAGAAATTACTTTATG  881

seq1  GTACAATAAATTTCTCAGTAAATTAATATATCTGATTTCTTATTTAAAAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAATAAATTTCTCAGTAAATTAATATATCTGATTTCTTATTTAAAAG  931

seq1  ATATTCTAAGTCATTTTATTTCACAGTGCTGAGATATATGGCTACCCTGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCTAAGTCATTTTATTTCACAGTGCTGAGATATATGGCTACCCTGT  981

seq1  CTCAAGAGTATAAAGCTACTCCCTCTTCGCAGAGCAGAATTC  1042
      ||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGAGTATAAAGCTACTCCCTCTTCGCAGAGCAGAATTC  1023