BAC Information

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BAC

Clone NameB6Ng01-031K01
ChromosomeX (Build37)12 (Build37)
Map Location 111,426,487 - 111,426,92869,053,706 - 69,054,251
singlet/doubletsingletsinglet
Overlap geneLOC100039201
Upstream geneDach2, LOC237016, EG664945, EG634881
Downstream geneKlhl4, Gm1866, EG546361, EG237009, 4930524E20Rik, LOC237008, EG664969, EG546362
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-031K01.bB6Ng01-031K01.g
ACCDH861186DH861187
length437990
definitionDH861186|Mus musculus domesticus DNA, BAC clone: B6Ng01-031K01, 5' end.DH861187|Mus musculus domesticus DNA, BAC clone: B6Ng01-031K01, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(111,426,487 - 111,426,928)(69,053,706 - 69,054,251)
sequence
tctgataaatcaaatgaaataacacacatatgcagaaaaataaattttct
ctgaatgttccaatattagttgtcaaagcaaatgttcaatttttggcaaa
aaaaaaaaaacagagagaattgggaatagaacatatctattcaatacaac
aaaatatgtctgtctcacagatactcatgctttattagaacactacttca
agaaaaaaatgactgtatgtatgtgaacatagatggctatgatagcagtt
ttggatgttttgaaacttatgtaaaatatgtatgagaaataaaatgaata
aatatgggaaacaagaatatatatatatgtgtgtgtgttttgtgtgtgtg
tgtgtgtgtgtgtgtgggaagcaatgtaattgctgcagaaaatttaaagt
gaattttggtggaaaataattttttttaaaaattcat
gaattctttgaatagttcttgtttccatttggttaatttcacccctgagt
ttgatgattttctgctgtctactcctcttgggtgaatttgcttctttttg
ttcctgagcttttaggtgtgttgtcaaggtgctagtgtgtgctctttcta
gtttctttttggaggcactgagagctatgagttttcctcttagaaatgct
ttcattgtttcccataagtttgggtatgttgtggctttattttcattaaa
ctctaaaaagtccttattttttttctttattcctttcttgaccaagttat
catggagaagagtgttgttcagtttccatatgaatgttggatttctatta
tttatgttgttattgaagatcagccttagtccatggtgatctgataggat
gcctgggacaatttcaatatttttgtgtctgttgaggcctcttttgtgtc
caattatatggccaattttggagaaggtaccatgaggtgctgagaagaag
atatatccttttgttttaggataaaatgtttggtagatatctgttatatc
catttgtttcataacttctgttagtttcactgtgtccctgtttagtttct
gtttccatgatctgttcattgatgaaagtggtgtgctgaagtctcccact
attattgtgtgaggtgcaatgtgtgctttgagttttactaaagttcattt
aatgaatgtggctgcccttgtatttggagcatagatattcagaattgata
gttcctcttggataattttacatttgatgagtatgaagtccccctccgtg
ccttttttgatgactttgggttggaagtcgattttaatagatattagaac
ggctactgcaggtgtttttcagactattcacttggaaaattgttttccag
tctttcattctgaggtactgtctgtctttttcctgcgatgggtatcatgt
aagcagcaaatgttgggtcctggtggaagcccgtctgtta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_111426487_111426928
seq2: B6Ng01-031K01.b_48_490 (reverse)

seq1  ATGAATTTTTCTAATTATTTATTTTCCAGC-TGTTTCACTTTAAATTTTC  49
      ||||||||||  ||  | |||||||||| |    ||||||||||||||||
seq2  ATGAATTTTTAAAAAAAATTATTTTCCACCAAAATTCACTTTAAATTTTC  50

seq1  TGCAGCAATTACATTGCTTACCACACACACACACACACACACACACAAAA  99
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TGCAGCAATTACATTGCTTCCCACACACACACACACACACACACACAAAA  100

seq1  CACACACACATATATATATATTCTTGTTTCCCATATTTATTCATTTTATT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACATATATATATATTCTTGTTTCCCATATTTATTCATTTTATT  150

seq1  TCTCATACATATTTTACATAAGTTTCAAAACATCCAAAACTGCTATCATA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATACATATTTTACATAAGTTTCAAAACATCCAAAACTGCTATCATA  200

seq1  GCCATCTATGTTCACATACATACAGTCATTTTTTTCTTGAAGTAGTGTTC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATCTATGTTCACATACATACAGTCATTTTTTTCTTGAAGTAGTGTTC  250

seq1  TAATAAAGCATGAGTATCTGTGAGACAGACATATTTTGTTGTATTGAATA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAAGCATGAGTATCTGTGAGACAGACATATTTTGTTGTATTGAATA  300

seq1  GATATGTTCTATTCCCAATTCTCTCTGTTTTTTTTTTTTTGCCAAAAATT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATGTTCTATTCCCAATTCTCTCTGTTTTTTTTTTTTTGCCAAAAATT  350

seq1  GAACATTTGCTTTGACAACTAATATTGGAACATTCAGAGAAAATTTATTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATTTGCTTTGACAACTAATATTGGAACATTCAGAGAAAATTTATTT  400

seq1  TTCTGCATATGTGTGTTATTTCATTTGATTTATCAGAGAATTC  442
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCATATGTGTGTTATTTCATTTGATTTATCAGAGAATTC  443

seq1: chr12_69053706_69054251
seq2: B6Ng01-031K01.g_516_1055 (reverse)

seq1  TAACAGACTGGCTACACAAACAGGACCCAACATTCTGCTGCTTACAGGAA  50
      |||||||| ||||   | | |||||||||||||| ||||||||||| || 
seq2  TAACAGACGGGCT--TCCACCAGGACCCAACATT-TGCTGCTTACATGAT  47

seq1  ACCCATCTCAGGGAAAAAGACAGACACTACCTCAGAGTGAAAGGCTGGAA  100
      ||||||| || ||||||||||||||| ||||||||| |||||| ||||||
seq2  ACCCATCGCA-GGAAAAAGACAGACAGTACCTCAGAATGAAAGACTGGAA  96

seq1  AACAATTTTCCAAGCAAATGGACTGAAGAAACAAGCTGGAGTAGCCATTT  150
      ||||||||||||||  ||| | ||||| |||| | ||| ||||||| || 
seq2  AACAATTTTCCAAGTGAATAGTCTGAA-AAAC-ACCTGCAGTAGCCGTTC  144

seq1  TAATATCGGATAAAATCGACTTCCAACCCAAAGTTATCAAAAAAGACAAG  200
      |||||||   |||||||||||||||||||||||| |||||||||| || |
seq2  TAATATCTATTAAAATCGACTTCCAACCCAAAGTCATCAAAAAAGGCACG  194

seq1  GAGGGACACTTCATACTCATCAAAGGTAAAATCCTCCAAGAGGAACTCTC  250
      |||||  ||||||||||||||||| |||||||  ||||||||||||| ||
seq2  GAGGGGGACTTCATACTCATCAAATGTAAAATTATCCAAGAGGAACTATC  244

seq1  AATTCTGAATATCTACGCACCAAATGCAAGGGCAGCCACATTCATTAGAG  300
      ||||||||||||||| || |||||| ||||||||||||||||||||| | 
seq2  AATTCTGAATATCTATGCTCCAAATACAAGGGCAGCCACATTCATTAAAT  294

seq1  ACACTTTAGTAAAGCTCAAAGCATACATTGCACCTCACACAATAATAGTG  350
        ||||||||||| ||||||||| ||||||||||||||||||||||||||
seq2  GAACTTTAGTAAAACTCAAAGCACACATTGCACCTCACACAATAATAGTG  344

seq1  GGAGACTTCAACACACCACTTTCTTCAAAGGACAGATCGTGGAAACAGAA  400
      |||||||||| |||||||||||| |||| | ||||||| |||||||||||
seq2  GGAGACTTCAGCACACCACTTTCATCAATGAACAGATCATGGAAACAGAA  394

seq1  ACTAAACAGGGACACAGTGAAACTAACAGAAGTTATGAAACAAATGGACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||  
seq2  ACTAAACAGGGACACAGTGAAACTAACAGAAGTTATGAAACAAATGGATA  444

seq1  TGACAGATATCTACAGAACATTTTATCCTAAAACAAAAGGATATACCTTC  500
      | ||||||||||||  ||||||||||||||||||||||||||||| ||||
seq2  TAACAGATATCTACCAAACATTTTATCCTAAAACAAAAGGATATATCTTC  494

seq1  TTCTCAGCACCTCACGGGACCTTCTCCAAAATTGACCATATAATTG  546
      |||||||||||||| || |||||||||||||||| |||||||||||
seq2  TTCTCAGCACCTCATGGTACCTTCTCCAAAATTGGCCATATAATTG  540