BAC Information

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BAC

Clone NameB6Ng01-032M14
Chromosome12 (Build37)
Map Location 106,513,922 - 106,665,598
singlet/doubletdoublet
Overlap geneLOC100040310, 2810011L19Rik, LOC100040339, EG668081
Upstream geneEG238395, Serpina3k, EG628916, Serpina3m, Serpina3n, Gsc, Dicer1, Clmn, 4831426I19Rik, Snhg10, Glrx5, LOC100040301, Tcl1b2, Tcl1b1, Tcl1b5, Tcl1b3, Tcl1b4, Tcl1
Downstream geneD430019H16Rik, Bdkrb2, Bdkrb1, 2410024A21Rik, 4933433P14Rik, Ak7, Papola, Vrk1, LOC100040386, LOC100040404, LOC100040420
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032M14.bB6Ng01-032M14.g
ACCDH862020DH862021
length1,055278
definitionDH862020|Mus musculus domesticus DNA, BAC clone: B6Ng01-032M14, 5' end.DH862021|Mus musculus domesticus DNA, BAC clone: B6Ng01-032M14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(106,513,922 - 106,514,982)(106,665,321 - 106,665,598)
sequence
gaattcaccagctaggctcagctaggctcttatagttggctccccagcac
agcactgggactgcaagggctcaccagctatttccatagctgtaggggaa
tgaagccaggtcctgaagcttgcatggcaagtgctttccctgacagagct
ctctccccagcccaggactgaagtcattccaccaagaactttggaattga
ttctaagcccatcagtcatagcctggtcgcttggtggaccccacaacgcc
aaggtcaaagctctctctgcctcaattcttctctctagctgggtttcctt
tgccagggacggccactactcctggcccacggattatccaggtccctttg
atatctttacaggcagtaagcctctagttgtctcaggctgaccccaggga
cctccagacttctgcatctcatcatttataacaccagtgactacccacaa
gcatctcttctgccccagccagagttcctttttattttctctgggttctt
agagcagccagaactcatgtctatccaccatttaatcatgggttcagtct
ctcgggcttgtgtgcttcctgctccagcctcaaggtcatgtggtagatgc
tccgaagtctgcaggactgtagggttgatgctctagcttgggtgtcagtt
tacataagtcctctccacactagctaggaagcaggttaggtctccatatc
cagagtgtggagggcttgtcctgttgctccgataaccaaggagagcagtc
tcccatcggctatgacagcaagctttttctggtggtgcgctgggcagcag
tgttttgagaggttacactttcacaaatcccattctaggtgtctttagtc
tgtcccctgcccgggcatgggtaagtcacaacaggccttcgcttagttta
tagttctggaagctggaaatccaatggcagtgttctagtttctgtccaac
cctgctcacaaggctccagtgacaaaggaaagcacatttcactaggcttc
acctcgacaccagtgactttctggctcactgacagagcgtggtgaaggga
cactg
cactctggggcaaacccaaactaaataaattttaagaaatggtgaatttc
ctctcacaggaaaggctccgaggaagccccggaatgttcctattagcttt
ccatagaaacagccgtctgaggagcagggccacccaggggctctctatat
gagctactgtggttgaaagcccttttaaaattaccaagtatttagtgctc
tctctattgtgatggtcccagcttcatgatggaggtgctcttcagtgcta
tgctttgaggctcgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_106513922_106514982
seq2: B6Ng01-032M14.b_50_1104

seq1  GAATTCACCAGCTAGGCTCAGCTAGGCTCTTATAGTTGGCTCCCCAGCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCAGCTAGGCTCAGCTAGGCTCTTATAGTTGGCTCCCCAGCAC  50

seq1  AGCACTGGGACTGCAAGGGCTCACCAGCTATTTCCATAGCTGTAGGGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTGGGACTGCAAGGGCTCACCAGCTATTTCCATAGCTGTAGGGGAA  100

seq1  TGAAGCCAGGTCCTGAAGCTTGCATGGCAAGTGCTTTCCCTGACAGAGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCCAGGTCCTGAAGCTTGCATGGCAAGTGCTTTCCCTGACAGAGCT  150

seq1  CTCTCCCCAGCCCAGGACTGAAGTCATTCCACCAAGAACTTTGGAATTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCCCAGCCCAGGACTGAAGTCATTCCACCAAGAACTTTGGAATTGA  200

seq1  TTCTAAGCCCATCAGTCATAGCCTGGTCGCTTGGTGGACCCCACAACGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAGCCCATCAGTCATAGCCTGGTCGCTTGGTGGACCCCACAACGCC  250

seq1  AAGGTCAAAGCTCTCTCTGCCTCAATTCTTCTCTCTAGCTGGGTTTCCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCAAAGCTCTCTCTGCCTCAATTCTTCTCTCTAGCTGGGTTTCCTT  300

seq1  TGCCAGGGACGGCCACTACTCCTGGCCCACGGATTATCCAGGTCCCTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGGGACGGCCACTACTCCTGGCCCACGGATTATCCAGGTCCCTTTG  350

seq1  ATATCTTTACAGGCAGTAAGCCTCTAGTTGTCTCAGGCTGACCCCAGGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTTTACAGGCAGTAAGCCTCTAGTTGTCTCAGGCTGACCCCAGGGA  400

seq1  CCTCCAGACTTCTGCATCTCATCATTTATAACACCAGTGACTACCCACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCAGACTTCTGCATCTCATCATTTATAACACCAGTGACTACCCACAA  450

seq1  GCATCTCTTCTGCCCCAGCCAGAGTTCCTTTTTATTTTCTCTGGGTTCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTCTTCTGCCCCAGCCAGAGTTCCTTTTTATTTTCTCTGGGTTCTT  500

seq1  AGAGCAGCCAGAACTCATGTCTATCCACCATTTAATCATGGGTTCAGTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAGCCAGAACTCATGTCTATCCACCATTTAATCATGGGTTCAGTCT  550

seq1  CTCGGGCTTGTGTGCTTCCTGCTCCAGCCTCAAGGTCATGTGGTAGATGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGGGCTTGTGTGCTTCCTGCTCCAGCCTCAAGGTCATGTGGTAGATGC  600

seq1  TCCGAAGTCTGCAGGACTGTAGGGTTGATGCTCTAGCTTGGGTGTCAGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGAAGTCTGCAGGACTGTAGGGTTGATGCTCTAGCTTGGGTGTCAGTT  650

seq1  TACATAAGTCCTCTCCACACTAGCTAGGAAGCAGGTTAGGTCTCCATATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAAGTCCTCTCCACACTAGCTAGGAAGCAGGTTAGGTCTCCATATC  700

seq1  CAGAGTGTGGAGGGCTTGTCCTGTTGCTCCGATAACCAAGGAGAGCAGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTGTGGAGGGCTTGTCCTGTTGCTCCGATAACCAAGGAGAGCAGTC  750

seq1  TCCCATCGGCTATGACAGCAAGCTTTTTCTGGTGGTGCGCTGGGCAGCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATCGGCTATGACAGCAAGCTTTTTCTGGTGGTGCGCTGGGCAGCAG  800

seq1  TGTTTTGAGAGGTTACACTTTCACAAATCCAATTCTAGGTGTCTTTAGTC  850
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TGTTTTGAGAGGTTACACTTTCACAAATCCCATTCTAGGTGTCTTTAGTC  850

seq1  TGTCCCCTGCCCGGGCATGGGTAAGTCACAACAGGCCTTCGCTTAGTTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCCTGCCCGGGCATGGGTAAGTCACAACAGGCCTTCGCTTAGTTTA  900

seq1  TAGTTCTGGAAGCTGGAAATCCCAATGGCAGGTGTTCTAGTTTCTGTCCA  950
      |||||||||||||||||||| ||||||||| |||||||||||||||||||
seq2  TAGTTCTGGAAGCTGGAAAT-CCAATGGCA-GTGTTCTAGTTTCTGTCCA  948

seq1  ACCCCTGCTCACAAGGCTCCAGTGACAAAGGAAAGCACAATTTCACTAGG  1000
      | |||||||||||||||||||||||||||||||||||| |||||||||||
seq2  A-CCCTGCTCACAAGGCTCCAGTGACAAAGGAAAGCAC-ATTTCACTAGG  996

seq1  CTTCACCTCGGACACCAGTGACTTTCTGGGCTCACTGACAGAGCGTGGTG  1050
      ||||||||| ||||||||||||||||| ||||||||||||||||||||||
seq2  CTTCACCTC-GACACCAGTGACTTTCT-GGCTCACTGACAGAGCGTGGTG  1044

seq1  AGGGGACACTG  1061
      | |||||||||
seq2  AAGGGACACTG  1055

seq1: chr12_106665321_106665598
seq2: B6Ng01-032M14.g_75_352 (reverse)

seq1  CACACACACACACACGAGCCTCAAAGCATAGCACTGAAGAGCACCTCCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACGAGCCTCAAAGCATAGCACTGAAGAGCACCTCCAT  50

seq1  CATGAAGCTGGGACCATCACAATAGAGAGAGCACTAAATACTTGGTAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAGCTGGGACCATCACAATAGAGAGAGCACTAAATACTTGGTAATT  100

seq1  TTAAAAGGGCTTTCAACCACAGTAGCTCATATAGAGAGCCCCTGGGTGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAGGGCTTTCAACCACAGTAGCTCATATAGAGAGCCCCTGGGTGGC  150

seq1  CCTGCTCCTCAGACGGCTGTTTCTATGGAAAGCTAATAGGAACATTCCGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTCCTCAGACGGCTGTTTCTATGGAAAGCTAATAGGAACATTCCGG  200

seq1  GGCTTCCTCGGAGCCTTTCCTGTGAGAGGAAATTCACCATTTCTTAAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTCCTCGGAGCCTTTCCTGTGAGAGGAAATTCACCATTTCTTAAAAT  250

seq1  TTATTTAGTTTGGGTTTGCCCCAGAGTG  278
      ||||||||||||||||||||||||||||
seq2  TTATTTAGTTTGGGTTTGCCCCAGAGTG  278