BAC Information

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BAC

Clone NameB6Ng01-034H13
Chromosome12 (Build37)
Map Location 19,767,411 - 19,768,054
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668558, LOC100042641, LOC668568, LOC668570, EG668413, LOC671401, EG546524, EG668584, EG544848, EG627871, LOC100042698, LOC629055, EG668588, LOC100042706
Downstream geneEG668594, EG668600, LOC100042727, LOC673301, EG668605, LOC668614, LOC100042751, LOC100043371, EG668455, LOC100042755, LOC100043377
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-034H13.bB6Ng01-034H13.g
ACCDH863218DH863219
length6451,160
definitionDH863218|Mus musculus domesticus DNA, BAC clone: B6Ng01-034H13, 5' end.DH863219|Mus musculus domesticus DNA, BAC clone: B6Ng01-034H13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
ggaattctcaggtagactgaagtggaagtcttttctagtggatgaaaggt
tggttggcttctgttaagtgcagaagaccatgtggtaatctgggttcaag
gcattcttttttggtttttgttttctcaagacagggtctcactatgtagc
cctggcttacctggaactcactatggagatcagggtggcctcaaactcac
agagatctacctgcctctgcctctcatgtgctggaattcaaggcatgtac
cactatgcctggatttcaaaatgttctttcagtcccaatcagggagatac
tttgaaaatgcaaatctttttgaagtggttaggtgaatttccatgagcag
acaacaggagtttgatcctgtgacataaatcgtgggaagatagaacaacc
aattcctgtaagttgccctctgacttcatgctagggcaaatgcacactcc
cttatatgtatgctccagcccaccccaccccctaacactaatatgtaatg
ataaataaagcaggaactggggctggagagatggctcaacagttagagca
atgactgctcttccaggggtcctgagttcaattttcaagcaaccacatgg
tggcttcacaaccatctgtaagggggtctgaggctctcttctagt
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagagcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagagacaaagtatggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcttccaaatgctgacaccattgcatacactagcaagattttactgaaa
ggacccagatgtagcttgtctcttgtgagactttgcagggcctagcaaac
acagaagtggatgctcacagtcagctatggatggacacagggctcccaat
ggaggagctagagaaagtacccaaggagcttaagggatcttcaacctaat
aggtggaacaactttatgaactaactagtacccctgagctctggactctt
agctgcatatgtatcaaagatggcctagtctgcctctctttaataggtcc
attggcaccagacttttgtgcctgtaaggaaacgcccaggcaaagggggg
agtggtggtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_19767411_19768054
seq2: B6Ng01-034H13.b_35_678 (reverse)

seq1  ACTAGAAGAGAGCATCAGACCCCATTACAGATGGTTGTG-AGCCACCATG  49
      ||||||||||||| ||||||||| ||||||||||||||| ||||||||||
seq2  ACTAGAAGAGAGCCTCAGACCCCCTTACAGATGGTTGTGAAGCCACCATG  50

seq1  TGGTTGCTTG-AAATTGAACTCAGGACCCCTGGAAGAGCAGTCATTGCTC  98
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGCTTGAAAATTGAACTCAGGACCCCTGGAAGAGCAGTCATTGCTC  100

seq1  TTAACTGCTGAGCCATCTCTCCAGCCCCAGTTCCTGCTTTATTTATCATT  148
       |||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  -TAACTGTTGAGCCATCTCTCCAGCCCCAGTTCCTGCTTTATTTATCATT  149

seq1  ACATATTAGTGTTAGGGGGTGGGGTGGGCTGGAGCATACATATAAGGGAG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATTAGTGTTAGGGGGTGGGGTGGGCTGGAGCATACATATAAGGGAG  199

seq1  TGTGCATTTGCCCTAGCATGAAGTCAGAGGGCAACTTACAGGAATTGGTT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCATTTGCCCTAGCATGAAGTCAGAGGGCAACTTACAGGAATTGGTT  249

seq1  GTTCTATCTTCCCACGATTTATGTCACAGGATCAAACTCCTGTTGTCTGC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTATCTTCCCACGATTTATGTCACAGGATCAAACTCCTGTTGTCTGC  299

seq1  TCATGGAAATTCACCTAACCACTTCAAAAAGATTTGCATTTTCAAAGTAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGAAATTCACCTAACCACTTCAAAAAGATTTGCATTTTCAAAGTAT  349

seq1  CTCCCTGATTGGGACTGAAAGAACATTTTGAAATCCAGGCATAGTGGTAC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTGATTGGGACTGAAAGAACATTTTGAAATCCAGGCATAGTGGTAC  399

seq1  ATGCCTTGAATTCCAGCACATGAGAGGCAGAGGCAGGTAGATCTCTGTGA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTTGAATTCCAGCACATGAGAGGCAGAGGCAGGTAGATCTCTGTGA  449

seq1  GTTTGAGGCCACCCTGATCTCCATAGTGAGTTCCAGGTAAGCCAGGGCTA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGAGGCCACCCTGATCTCCATAGTGAGTTCCAGGTAAGCCAGGGCTA  499

seq1  CATAGTGAGACCCTGTCTTGAGAAAACAAAAACCAAAAAAGAATGCCTTG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTGAGACCCTGTCTTGAGAAAACAAAAACCAAAAAAGAATGCCTTG  549

seq1  AACCCAGATTACCACATGGTCTTCTGCACTTAACAGAAGCCAACCAACCT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCAGATTACCACATGGTCTTCTGCACTTAACAGAAGCCAACCAACCT  599

seq1  TTCATCCACTAGGGCTGACTTCCACTTCAGTCTACCTGATGAATTC  644
      ||||||||||||    ||||||||||||||||||||||| ||||||
seq2  TTCATCCACTAGAAAAGACTTCCACTTCAGTCTACCTGA-GAATTC  644