BAC Information

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BAC

Clone NameB6Ng01-035L16
Chromosome12 (Build37)
Map Location 65,320,966 - 65,322,061
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC435302
Downstream geneEG623046, LOC623123, LOC217645, LOC217647, Gm527, Klhl28, A430041B07Rik, Prpf39, Fkbp3, Fancm, C79407
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-035L16.bB6Ng01-035L16.g
ACCDH864121DH864122
length1,0471,092
definitionDH864121|Mus musculus domesticus DNA, BAC clone: B6Ng01-035L16, 5' end.DH864122|Mus musculus domesticus DNA, BAC clone: B6Ng01-035L16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgaccaagtttatgattcttttagattttatgattttgggtt
catctaggtgattcctactggcaaacatttctgcatgatggatacgtttt
aaagagaaaatccaggcattctcttttatattgctatttacacaatgaaa
cctgggcatatggaattccttttttagttctaagtctgatatagatctag
cacattaggatagaagagaggatgtgcaagggtagccctaagggttggaa
atgtttgtgtggaatgaaatcatgtagacagagtgagctgggctggtata
tagggtatatatgccttctgatccaagtgtgaagatagatctggctggct
agaacatttggatctgctataggagggaccttttgattgtggggtaagta
aaaagggtcctggaagaagcaaagcaaaagtattgatggagtgcaagtat
gggtggccacactagactgggtaactggatgttagattagggctaaatat
ggtgggctgataagaacaagtgaatggggaaggtcagggtcactcactag
gatagactctggagagcaatgtaggggatctaggtaggttaacagattgg
aattggtacaggaaatggtacagaaagggcctgtgtggtggcaagttgta
tgggtcctggtggaagttgtggtaacatcatcacttaattcttgttatga
atttttcttgacttactttgtgggtttttccttaaatacacactcatact
ttcaactttcatatatatatatatacatatatatatatacatatgtatat
acacatatgtatatatatatatgtttgtgtgtatattattatatgtgtct
taatatttccctgtgaattaatttgatctcaaatgataagtaatatattg
atacatctactacaaattttccagtgatgatatcactccaagttctcatt
agaaaaacatgccatctctgtctttccttcatctacaccatatctctggg
aaagaaacaattgtgcgacggaaggtaatattttggagtggagtgtg
gaattctccccttactgtattatacgtactgccatgaggctggttacctc
tgtttacctctaatgcttctgtcctcttccacattccactgtgtcggtct
ctattccagaattcttgcttcctacgggaactctcaccttctatttcctg
cctcagctccagatgaatcaatttatttgacaggggaagcttccaaactg
acatacgagattccttcttcttataggtagacatttacagaaactgataa
atagacacattgcattctaatattcccaaatgtaatgtggatctatagag
ctcttacatgacatgactctgtatctcatttactctcattgtgaatatca
ggattctcaaagacacaaatgatagactattccagagctcctgtgtcatc
ttctgtctaaaatataaagtttctaaaatagtagattatgtctgattata
aacaatgataacagtgaaatatttgcaaatgtcatcactactgtttctca
ttgtttgataattatattgtcaacatctgtacctgtcacatagaacatgt
aatagctttcactttctcattatttcagttgcacaagaaaaaaatagttt
atgatccctttctgtttctttaataaagtatcttaatcttttctagcatt
ctgaaactcattctgtactatatattatgggaatgaataataaaagtgtg
caaagttgtaatttattcgggttttatataaattttacattttattttat
atacttacaatgtaaatttatatatatatatatattcatggaaataaagt
tatgctgtgatttttcattgaaatttgagataattaaagtaagtaattaa
cttaataccccagcataaaattttccataataatatttaaaatttactac
tatagtgatatggaaatctacagtatcatcatttggccccactcagtcag
ctttgcaattattctgaagcacctgtcaatgttttcctcccacctcacta
ggcttgtcatctttggatgccctggtccagggttcagcccagcctctgca
atcaaccttcactccactctgagaaatacattgcttagagtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_65320966_65322061
seq2: B6Ng01-035L16.g_67_1158

seq1  GAATTCTCCCCTTACTGTATTATACGTACTGCCATGAGGCTGGTTACCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCCCTTACTGTATTATACGTACTGCCATGAGGCTGGTTACCTC  50

seq1  TGTTTACCTCTAATGCTTCTGTCCTCTTCCACATTCCACTGTGTCGGTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTACCTCTAATGCTTCTGTCCTCTTCCACATTCCACTGTGTCGGTCT  100

seq1  CTATTCCAGAATTCTTGCTTCCTACGGGAACTCTCACCTTCTATTTCCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTCCAGAATTCTTGCTTCCTACGGGAACTCTCACCTTCTATTTCCTG  150

seq1  CCTCAGCTCCAGATGAATCAATTTATTTGACAGGGGAAGCTTCCAAACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGCTCCAGATGAATCAATTTATTTGACAGGGGAAGCTTCCAAACTG  200

seq1  ACATACGAGATTCCTTCTTCTTATAGGTAGACATTTACAGAAACTGATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACGAGATTCCTTCTTCTTATAGGTAGACATTTACAGAAACTGATAA  250

seq1  ATAGACACATTGCATTCTAATATTCCCAAATGTAATGTGGATCTATAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGACACATTGCATTCTAATATTCCCAAATGTAATGTGGATCTATAGAG  300

seq1  CTCTTACATGACATGACTCTGTATCTCATTTACTCTCATTGTGAATATCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTACATGACATGACTCTGTATCTCATTTACTCTCATTGTGAATATCA  350

seq1  GGATTCTCAAAGACACAAATGATAGACTATTCCAGAGCTCCTGTGTCATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTCTCAAAGACACAAATGATAGACTATTCCAGAGCTCCTGTGTCATC  400

seq1  TTCTGTCTAAAATATAAAGTTTCTAAAATAGTAGATTATGTCTGATTATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTCTAAAATATAAAGTTTCTAAAATAGTAGATTATGTCTGATTATA  450

seq1  AACAATGATAACAGTGAAATATTTGCAAATGTCATCACTACTGTTTCTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATGATAACAGTGAAATATTTGCAAATGTCATCACTACTGTTTCTCA  500

seq1  TTGTTTGATAATTATATTGTCAACATCTGTACCTGTCACATAGAACATGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTGATAATTATATTGTCAACATCTGTACCTGTCACATAGAACATGT  550

seq1  AATAGCTTTCACTTTCTCATTATTTCAGTTGCACAAGAAAAAAATAGTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCTTTCACTTTCTCATTATTTCAGTTGCACAAGAAAAAAATAGTTT  600

seq1  ATGATCCCTTTCTGTTTCTTTAATAAAGTATCTTAATCTTTTCTAGCATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATCCCTTTCTGTTTCTTTAATAAAGTATCTTAATCTTTTCTAGCATT  650

seq1  CTGAAACTCATTCTGTACTATATATTATGGGAATGAATAATAAAAGTGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAACTCATTCTGTACTATATATTATGGGAATGAATAATAAAAGTGTG  700

seq1  CAAAGTTGTAATTTATTCGGGTTTTATATAAATTTTACATTTTATTTTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTTGTAATTTATTCGGGTTTTATATAAATTTTACATTTTATTTTAT  750

seq1  ATACTTACAATGTAAATTTATATATATATATATATTCATGGAAATAAAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTACAATGTAAATTTATATATATATATATATTCATGGAAATAAAGT  800

seq1  TATGCTGTGATTTTTCATTGAAATTTGAGATAATTAAAGTAAGTAATTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCTGTGATTTTTCATTGAAATTTGAGATAATTAAAGTAAGTAATTAA  850

seq1  CTTAATACCCCAGCATAAAATTTTCCATAATAATATTTAAAATTTACTAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATACCCCAGCATAAAATTTTCCATAATAATATTTAAAATTTACTAC  900

seq1  TATAGTGATATGGAAATCTACAGTAATCAATCATTT-GCCACACTCAGTC  949
      |||||||||||||||||||||||| ||| ||||||| ||| |||||||||
seq2  TATAGTGATATGGAAATCTACAGT-ATC-ATCATTTGGCCCCACTCAGTC  948

seq1  AGCTTTGCAATTATTCTGAAGCACCTGTCAATGTATTCCTCCCACCTCAC  999
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AGCTTTGCAATTATTCTGAAGCACCTGTCAATGTTTTCCTCCCACCTCAC  998

seq1  TAAGCTTGTCATCTTTGAATGCCCTGTCCCCAGGTTCCAGCCCAGCCTCT  1049
      || |||||||||||||| ||||||||   ||||| | |||||||||||||
seq2  TAGGCTTGTCATCTTTGGATGCCCTG-GTCCAGGGTTCAGCCCAGCCTCT  1047

seq1  GCAATCAACCTTCACTCCACTCTGAGAAATTCAATTGCTTTAGAGTC  1096
      |||||||||||||||||||||||||||||| | ||||| ||||||||
seq2  GCAATCAACCTTCACTCCACTCTGAGAAATAC-ATTGC-TTAGAGTC  1092