BAC Information

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BAC

Clone NameB6Ng01-038F03
Chromosome12 (Build37)
Map Location 15,134,751 - 15,226,438
singlet/doubletdoublet
Overlap genenone
Upstream geneAW125753, LOC100043256, Map1lc3-ps7, LOC668492, LOC100042426
Downstream geneLOC217409, Trib2, LOC100043268, EG432636, LOC100043273
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-038F03.bB6Ng01-038F03.g
ACCDH865913DH865914
length8451,100
definitionDH865913|Mus musculus domesticus DNA, BAC clone: B6Ng01-038F03, 5' end.DH865914|Mus musculus domesticus DNA, BAC clone: B6Ng01-038F03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(15,225,593 - 15,226,438)(15,134,751 - 15,135,871)
sequence
gaattcacttctcattatcactgtcatttctgtatagtgattctcagagt
cgcatcaaggacttcaaggacaaactcagaaagtgtgagttcaaaggggt
ctaacgcaagggaaaagagagtctagatctgtaaaacatgctcatcactg
gggacatacctcagtgagaaaatacccatgccctcactcatttatattgg
atctctactacttttacaggaacgtatcaaacagaaatggtcaatggata
cattggaataagatggatttggcagacatttataaaagcagtctaataaa
ttattggcttagttgaatgtagtttggtaatattttctgatattgtacct
ggtgatcattttatattttaatcctcttagagacttagctctgctcttta
caggtaaacatgtgatacccgccacatccagaggttcaagaggattattc
ttattcttttaatgaacatatggagtttcaagaactcaacgaagacttat
ttgtaagggtgaggtggtatggtagttgataatagtaatgattttccaag
tcaaagaacattcatccaagttcactgtgctagtttcccactacacctaa
caataccagtacattttatatttcattttatatttaccatgcatggtgag
tacagattaaaatctgtatatattatcctctgattcgctggcattttctc
ctcacagtttattgctagcatacgaatactaaaggggtggactgtgatcc
agcagggccttgcagatgaatcattctttttggagaatagcattcctggt
tgattgccatcacacacgcagtgaatggctctttctgactctagg
gaattcatttcatgggacagaaagtgagacagacaagtcaaagaatatac
atgcatgggtggaaaaaataaaaggtaatatgtctgcattttccaatgca
tggcagtccaatgaacacctactctgctgggtaattttaaatactcctat
ctcctatttaaagtcacaggcctatcttttgtacttctgtttttctatag
cttctctacaaatgagttcattagaaggcacacaagcacataaataagcg
agaaatctttgtaaatgctcagactatacactgggagcaaacaaattcat
gttttatttgctgttaaagtaattaatgacaaaggatttccataataata
tccctactaattgattctctgtgtcaatatgtctcaagtttccctagtaa
ctgccaatggtgattaagcactgaatgacttttatctgcagcagttgctt
gcatggggtattgtcaaggaactagaatttataaatgtcaggagacagag
acacagaaatgtgatcgtttaagacagtacttcataactgatgcatgcca
tgtctttgtcttcaatcatttcccttttctttctccttttccttttccct
gatgctatttcagaacagcaggatgtagtctgccttttacaacatatttt
agcatagaatatcatataaaataaaaataaaggcaatatctctgtatggt
ctttctggtgttttacatatcaatgatactgggatgaaggactaagtgaa
tatttctatatggtattgcagctgctttttgaaagatagtgaaaaaaaat
gaagtttgttgaccagagtgtctgggcttggcttgccctctaacacataa
gacatttcatttttctcaaataagcgagttgagaaatcaaagcactattt
tcttctttggggattctataaaagtatgacgagttccactgtattgagaa
tttactggagccttgatttttttattaggtatttatttcatttacatttc
caatgctatcccaaaagtcgtcacccacgctccccaccactctcaccacc
actccctctggctggcgttccctgtactgaggcaaataagttgcagatca

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_15225593_15226438
seq2: B6Ng01-038F03.b_47_891 (reverse)

seq1  CCTTGAGTCAGAAAGAGCCATTCCACTGCGTGTGTGATGGCAGTCAACCA  50
      ||| |||||||||||||||||| ||||||||||||||||||| |||||||
seq2  CCTAGAGTCAGAAAGAGCCATT-CACTGCGTGTGTGATGGCAATCAACCA  49

seq1  GGAGTGCTATTCTCCAATAAGAATGATTCATCTGCAAGGCCCTGCTGGAT  100
      ||| ||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GGAATGCTATTCTCCAAAAAGAATGATTCATCTGCAAGGCCCTGCTGGAT  99

seq1  CACAGTCCACCCCTTTAGTATTCGTATGCTAGCAATAAACTGTGAGGAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTCCACCCCTTTAGTATTCGTATGCTAGCAATAAACTGTGAGGAGA  149

seq1  AAATGCCAGCGAATCAGAGGATAATATATACAGATTTTAATCTGTACTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCCAGCGAATCAGAGGATAATATATACAGATTTTAATCTGTACTCA  199

seq1  CCATGCATGGTAAATATAAAATGAAATATAAAATGTACTGGTATTGTTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGCATGGTAAATATAAAATGAAATATAAAATGTACTGGTATTGTTAG  249

seq1  GTGTAGTGGGAAACTAGCACAGTGAACTTGGATGAATGTTCTTTGACTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAGTGGGAAACTAGCACAGTGAACTTGGATGAATGTTCTTTGACTTG  299

seq1  GAAAATCATTACTATTATCAACTACCATACCACCTCACCCTTACAAATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATCATTACTATTATCAACTACCATACCACCTCACCCTTACAAATAA  349

seq1  GTCTTCGTTGAGTTCTTGAAACTCCATATGTTCATTAAAAGAATAAGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCGTTGAGTTCTTGAAACTCCATATGTTCATTAAAAGAATAAGAAT  399

seq1  AATCCTCTTGAACCTCTGGATGTGGCGGGTATCACATGTTTACCTGTAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTCTTGAACCTCTGGATGTGGCGGGTATCACATGTTTACCTGTAAA  449

seq1  GAGCAGAGCTAAGTCTCTAAGAGGATTAAAATATAAAATGATCACCAGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGAGCTAAGTCTCTAAGAGGATTAAAATATAAAATGATCACCAGGT  499

seq1  ACAATATCAGAAAATATTACCAAACTACATTCAACTAAGCCAATAATTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATATCAGAAAATATTACCAAACTACATTCAACTAAGCCAATAATTTA  549

seq1  TTAGACTGCTTTTATAAATGTCTGCCAAATCCATCTTATTCCAATGTATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGACTGCTTTTATAAATGTCTGCCAAATCCATCTTATTCCAATGTATC  599

seq1  CATTGACCATTTCTGTTTGATACGTTCCTGTAAAAGTAGTAGAGATCCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGACCATTTCTGTTTGATACGTTCCTGTAAAAGTAGTAGAGATCCAA  649

seq1  TATAAATGAGTGAGGGCATGGGTATTTTCTCACTGAGGTATGTCCCCAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAATGAGTGAGGGCATGGGTATTTTCTCACTGAGGTATGTCCCCAGT  699

seq1  GATGAGCATGTTTTACAGATCTAGACTCTCTTTTCCCTTGCGTTAGACCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGCATGTTTTACAGATCTAGACTCTCTTTTCCCTTGCGTTAGACCC  749

seq1  CTTTGAACTCACACTTTCTGAGTTTGTCCTTGAAGTCCTTGATGCGACTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAACTCACACTTTCTGAGTTTGTCCTTGAAGTCCTTGATGCGACTC  799

seq1  TGAGAATCACTATACAGAAATGACAGTGATAATGAGAAGTGAATTC  846
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAATCACTATACAGAAATGACAGTGATAATGAGAAGTGAATTC  845

seq1: chr12_15134751_15135871
seq2: B6Ng01-038F03.g_68_1167

seq1  GAATTCATTTCATGGGACAGAAAGTGAGACAGACAAGTCAAAGAATATAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTCATGGGACAGAAAGTGAGACAGACAAGTCAAAGAATATAC  50

seq1  ATGCATGGGTGGAAAAAATAAAAGGTAATATGTCTGCATTTTCCAATGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATGGGTGGAAAAAATAAAAGGTAATATGTCTGCATTTTCCAATGCA  100

seq1  TGGCAGTCCAATGAACACCTACTCTGCTGGGTAATTTTAAATACTCCTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGTCCAATGAACACCTACTCTGCTGGGTAATTTTAAATACTCCTAT  150

seq1  CTCCTATTTAAAGTCACAGGCCTATCTTTTGTACTTCTGTTTTTCTATAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTATTTAAAGTCACAGGCCTATCTTTTGTACTTCTGTTTTTCTATAG  200

seq1  CTTCTCTACAAATGAGTTCATTAGAAGGCACACAAGCACATAAATAAGCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCTACAAATGAGTTCATTAGAAGGCACACAAGCACATAAATAAGCG  250

seq1  AGAAATCTTTGTAAATGCTCAGACTATACACTGGGAGCAAACAAATTCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATCTTTGTAAATGCTCAGACTATACACTGGGAGCAAACAAATTCAT  300

seq1  GTTTTATTTGCTGTTAAAGTAATTAATGACAAAGGATTTCCATAATAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTATTTGCTGTTAAAGTAATTAATGACAAAGGATTTCCATAATAATA  350

seq1  TCCCTACTAATTGATTCTCTGTGTCAATATGTCTCAAGTTTCCCTAGTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTACTAATTGATTCTCTGTGTCAATATGTCTCAAGTTTCCCTAGTAA  400

seq1  CTGCCAATGGTGATTAAGCACTGAATGACTTTTATCTGCAGCAGTTGCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCAATGGTGATTAAGCACTGAATGACTTTTATCTGCAGCAGTTGCTT  450

seq1  GCATGGGGTATTGTCAAGGAACTAGAATTTATAAATGTCAGGAGACAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGGGTATTGTCAAGGAACTAGAATTTATAAATGTCAGGAGACAGAG  500

seq1  ACACAGAAATGTGATCGTTTAAGACAGTACTTCATAACTGATGCATGCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGAAATGTGATCGTTTAAGACAGTACTTCATAACTGATGCATGCCA  550

seq1  TGTCTTTGTCTTCAATCATTTCCCTTTTCTTTCTCCTTTTCCTTTTCCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTTGTCTTCAATCATTTCCCTTTTCTTTCTCCTTTTCCTTTTCCCT  600

seq1  GATGCTATTTCAGAACAGCAGGATGTAGTCTGCCTTTTACAACATATTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTATTTCAGAACAGCAGGATGTAGTCTGCCTTTTACAACATATTTT  650

seq1  AGCATAGAATATCATATAAAATAAAAATAAAGGCAATATCTCTGTATGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATAGAATATCATATAAAATAAAAATAAAGGCAATATCTCTGTATGGT  700

seq1  CTTTCTGGTGTTTTACATATCAATGATACTGGGATGAAGGACTAAGTGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGGTGTTTTACATATCAATGATACTGGGATGAAGGACTAAGTGAA  750

seq1  TATTTCTATATGGTATTGCAGCTGCTTTTTGAAAGATAGTGAAAAAAAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTATATGGTATTGCAGCTGCTTTTTGAAAGATAGTGAAAAAAAAT  800

seq1  GAAGTTTGTTGACCAGAGTGTCTGGGCTTGGCTTGCCCTCTAACACATAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTTGTTGACCAGAGTGTCTGGGCTTGGCTTGCCCTCTAACACATAA  850

seq1  GACATTTCATTTTTCTCAAATAAGCGAGTTGAGAAAATCAAAGCACTATT  900
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GACATTTCATTTTTCTCAAATAAGCGAGTTGAG-AAATCAAAGCACTATT  899

seq1  TTCTTCTTTGGGGATTCTATAAAAGTATGACGAGTTCCACTGTATTGAGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTTTGGGGATTCTATAAAAGTATGACGAGTTCCACTGTATTGAGA  949

seq1  ATTTACTGGAGCCTTGATTTTTTTTAATTAGGTATTTATTTCATTTACAT  1000
      ||||||||||||||||||||||||  ||||||||||||||||||||||||
seq2  ATTTACTGGAGCCTTGATTTTTTT--ATTAGGTATTTATTTCATTTACAT  997

seq1  TTCCAATGCTATCCCAAAAGTCGTCCACCCCACGCTCCCCCACCCACTCC  1050
      |||||||||||||||||||||||||   ||||||||||||   |||||| 
seq2  TTCCAATGCTATCCCAAAAGTCGTC--ACCCACGCTCCCC--ACCACTC-  1042

seq1  TCCACCCACCCACTCCCACTTCTTGGCCCTGGCGTTCCCCTGTACTGAGG  1100
        ||||   |||||||| |    |||  |||||||| |||||||||||||
seq2  -TCACC--ACCACTCCCTC----TGG--CTGGCGTT-CCCTGTACTGAGG  1082

seq1  CAGATAAAGTTTGCAGGATCA  1121
      || ||||   ||||| |||||
seq2  CAAATAA--GTTGCA-GATCA  1100