BAC Information

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BAC

Clone NameB6Ng01-039N10
Chromosome12 (Build37)
Map Location 96,050,511 - 96,051,561
singlet/doubletsinglet
Overlap genenone
Upstream gene2610022K04Rik-ps, EG633639
Downstream geneLOC217786, LOC100039603, LOC667688, Flrt2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-039N10.bB6Ng01-039N10.g
ACCDH866986DH866987
length1,061935
definitionDH866986|Mus musculus domesticus DNA, BAC clone: B6Ng01-039N10, 5' end.DH866987|Mus musculus domesticus DNA, BAC clone: B6Ng01-039N10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattaacacaccttgggcttcatttcaatgaaaactatgagaatc
taggatctgaagacatggcaccaaggctaagtacaaatcccagttcaatt
cccagtacccacaatgggcaaattgcagctgcctgtagttccagttcaaa
aggatccagagttcttggccatcgtgaatactatacaactgtagaaaaca
tacaaataagtaggtacatgcactgtgaatatatacacatatatgtgaat
aaaatttagaaatcaaaatgtgtacattttaatcttgccacatgttcttt
aagaccattgtaccacataacacatggaaaatattagattctcattagaa
ggaatagtagaaaaaggataagttgaaaataaatgattttaggcaaaaat
attttattgggactttccttccatttttaatcatttgagagattgtgtgc
tattgccttctctcttagaaaaatgtaaaggttgccatgtggacatcaga
gtttgcttttatacatttctcacatctttgataaggtactgaagattgac
caatgtttccactttctgcattacaaataatgctgctatgatcatagtgg
aacactggcccttgtggtgtggtggaacaccttttgggtatatgcccagg
agtggtatagatgggtcttcaggtaaaactattcccagttttcagagaaa
acataagactggtttccagagtggttgttccagtttgcaatcccaccagc
catggaggagtgttcctctttctccacatcctcaccaacaaatgctgaca
cttgagtttagatcttagctattcatattggtatacagcaaaatctcacg
atcattttgatttgcatttccttgataactgagggtgatgaacatttttt
taattgggttatttgctttttatggagatcaacttcttgggtcttcatat
attttggatattagccctctatcctgtgaatggttaactaagattatatt
cccaatctgtagttgcaatttgttctattggcagtgtcctttgtattaca
gaaggattcta
gaattcagattctcatccaaatcacatggaaccagtgttctcctactgga
cttaagatcaagatgttgaattctcagctcctactgaatcatgcctgcct
ggttgctggcatgttctgttgcgttggtgataatgggcttatcctctgta
cctgtaaggcatctccaattaaatgtattttttaaagagcatagctaaat
gctcactaatacagaagcgggtaccagtgactgggatattcttgtgatag
gcctgatcatgctttagtttggaataatgtggatttggggaaattgcaaa
atagtaagtggggcttagttgctcatgctagtagcaatatggaagacttt
gttgctgagggtgatttgaactgtggaagcctggctctagaagtaccagt
gaagaagaatttcaatatgtgagctagagactgtttctgtggtattttgg
tgaagaatgtggcagttttttgccatcgtttgaagagtctacctgaggct
aaggtgaaaagttttatattaattgcattgacaaaggaagtttcaaaaaa
gcccagcagagatttagtttttttgtttagtctcataaactgaattttga
tcaagggtagaaagcaggaaaaatacaaatatatggttcaaagaattctg
gtttcattggagactcagctatggcatgtaatattttcctggaacctatc
ttaagagaggattttctttttcttttttgctgaagcagatgatgcagaca
tgatgtaggggaatcttttgctaaaaacagacaggtggtgatttttggag
gcaacttggaaagagggcatgtgatgtttgttgagtggatgcttgagaga
acacatgatgtttggaaaggtacacatattggccaaaacacaatggaggg
ggctgggtgatattggtattgctttgctggtttgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_96050511_96051561
seq2: B6Ng01-039N10.b_44_1092

seq1  GAATTCATTAACACACCTTGGGCTTCATTTCAATGAAAACTATGAGAATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTAACACACCTTGGGCTTCATTTCAATGAAAACTATGAGAATC  50

seq1  TAGGATCTGAAGACATGGCACCAAGGCTAAGTACAAATCCCAGTTCAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGATCTGAAGACATGGCACCAAGGCTAAGTACAAATCCCAGTTCAATT  100

seq1  CCCAGTACCCACAATGGGCAAATTGCAGCTGCCTGTAGTTCCAGTTCAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTACCCACAATGGGCAAATTGCAGCTGCCTGTAGTTCCAGTTCAAA  150

seq1  AGGATCCAGAGTTCTTGGCCATCGTGAATACTATACAACTGTAGAAAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATCCAGAGTTCTTGGCCATCGTGAATACTATACAACTGTAGAAAACA  200

seq1  TACAAATAAGTAGGTACATGCACTGTGAATATATACACATATATGTGAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAATAAGTAGGTACATGCACTGTGAATATATACACATATATGTGAAT  250

seq1  AAAATTTAGAAATCAAAATGTGTACATTTTAATCTTGCCACATGTTCTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTAGAAATCAAAATGTGTACATTTTAATCTTGCCACATGTTCTTT  300

seq1  AAGACCATTGTACCACATAACACATGGAAAATATTAGATTCTCATTAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCATTGTACCACATAACACATGGAAAATATTAGATTCTCATTAGAA  350

seq1  GGAATAGTAGAAAAAGGATAAGTTGAAAATAAATGATTTTAGGCAAAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATAGTAGAAAAAGGATAAGTTGAAAATAAATGATTTTAGGCAAAAAT  400

seq1  ATTTTATTGGGACTTTCCTTCCATTTTTAATCATTTGAGAGATTGTGTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATTGGGACTTTCCTTCCATTTTTAATCATTTGAGAGATTGTGTGC  450

seq1  TATTGCCTTCTCTCTTAGAAAAATGTAAAGGTTGCCATGTGGACATCAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGCCTTCTCTCTTAGAAAAATGTAAAGGTTGCCATGTGGACATCAGA  500

seq1  GTTTGCTTTTATACATTTCTCACATCTTTGATAAGGTACTGAAGATTGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCTTTTATACATTTCTCACATCTTTGATAAGGTACTGAAGATTGAC  550

seq1  CAATGTTTCCACTTTCTGCATTACAAATAATGCTGCTATGATCATAGTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTTTCCACTTTCTGCATTACAAATAATGCTGCTATGATCATAGTGG  600

seq1  AACACTGGCCCTTGTGGTGTGGTGGAACACCTTTTGGGTATATGCCCAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTGGCCCTTGTGGTGTGGTGGAACACCTTTTGGGTATATGCCCAGG  650

seq1  AGTGGTATAGATGGGTCTTCAGGTAAAACTATTCCCAGTTTTCAGAGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTATAGATGGGTCTTCAGGTAAAACTATTCCCAGTTTTCAGAGAAA  700

seq1  ACATAAGACTGGTTTCCAGAGTGGTTGTTCCAGTTTGCAATCCCACCAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAGACTGGTTTCCAGAGTGGTTGTTCCAGTTTGCAATCCCACCAGC  750

seq1  CATGGAGGAGTGTTCCTCTTTCTCCACATCCTCACCAACAAATGCTGACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAGGAGTGTTCCTCTTTCTCCACATCCTCACCAACAAATGCTGACA  800

seq1  CTTGAGTTTAGATCTTAGCTATTCATATTGGTATACAGCAAAATCTCAGG  850
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CTTGAGTTTAGATCTTAGCTATTCATATTGGTATACAGCAAAATCTCACG  850

seq1  ATCATTTTGATTTGCATTTCCTTGATAACTGAGGGTGATGAACATTTTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTTGATTTGCATTTCCTTGATAACTGAGGGTGATGAACATTTTTT  900

seq1  TAATTGGGTTATTTGCTTTTTATGGAGATCAACTTCTTGGGTTCTTCATA  950
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TAATTGGGTTATTTGCTTTTTATGGAGATCAACTTCTTGGG-TCTTCATA  949

seq1  TATTTTGGATATTAGCCCTCTATCCTGTGAATGGTTAACTAAGATTATAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGGATATTAGCCCTCTATCCTGTGAATGGTTAACTAAGATTATAT  999

seq1  TCCCAATCTGTAGGTTGCAATTTGTTCTATTGGCAGTGTCCTTTGTATTA  1050
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TCCCAATCTGTA-GTTGCAATTTGTTCTATTGGCAGTGTCCTTTGTATTA  1048

seq1  C  1051
      |
seq2  C  1049