BAC Information

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BAC

Clone NameB6Ng01-045I08
Chromosome12 (Build37)
Map Location 25,062,411 - 25,185,514
singlet/doubletdoublet
Overlap geneEG668714, LOC629364, Taf1b
Upstream geneEG668518, LOC100043445, LOC668697, LOC100042923, LOC677338, EG668701, LOC668471, LOC668703, LOC546534, 9030624G23Rik, EG668710, LOC100042945, EG668711
Downstream geneGrhl1, EG629383, Klf11, Cys1, Rrm2, LOC668719, Mboat2, EG629397, C330002I19Rik, Id2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-045I08.bB6Ng01-045I08.g
ACCDH870955DH870956
length1,062806
definitionDH870955|Mus musculus domesticus DNA, BAC clone: B6Ng01-045I08, 5' end.DH870956|Mus musculus domesticus DNA, BAC clone: B6Ng01-045I08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(25,062,411 - 25,063,481)(25,184,713 - 25,185,514)
sequence
gaattctcctttgggagctgcacaggactcagaactgtacatactggttc
atgataatacgaatccagtatggacaccagcgtgagtatgatactaagca
ctgtaggggaaggtcaaactagaccttctgagttccctgagagacacacc
ccgtttgcacggaggttggtatctagttccagttacaaccaaagaatctt
tctaaggctctgcctcccctcaccaaaagataccaagagccatgagtgtg
ggtcatgacagcacccacaggaggaatcctatcagtgctcccccagccat
ggttaatgcccactcatccaaggatgagaagatcatttgatcacctcagt
taagtgtggccttattaaattaagttcaaagaggggagatgttagagacc
ataccgtaaaaaagtaggcctttcacagcttcccaccctaacaagccaaa
tggccttgtgctaaggagcaggtcatcacacacctacctccctattccct
tcctggcacctgaggcagtaaaaagctgaattatagtcccctcttctgta
tctctcccagactcccaagacttctaaggacatgagttacgtgctgagcc
cagcctgacacccaaggctgttaaggaggattctacattccagagataag
actcagagtgcctgccgcctgcagcctgatttcggccttcatgtccccag
atgcccacttctttgttctttgttaattccccatcaacccctccttattt
tcccctggctgtgtgcttaaaacctggtgattcagcctaataaactgaga
ccttgagagaaccccttctttgtctccacttctcatcactccctctcatt
ttctcccaggtttgcggtcccctcgcacccacaaaaagtagtcctgctgg
gcggacatgggagacgctgggttttgtgttgattgtgtcttttgagatag
agtctatgcatccaggctggctgaattaagatatcttgagctggcatgat
gtgcagactttaatcccacactcagagcgaagttgctgatccctgatttg
cagtcagccttg
gaattcagccattgagtgagtgataccgatgcactgtttaggagtcaggc
cacataccacccggaaacttcaattttgagaacataatcaagttcgtgaa
tggcacattacttacatctgtgacattgtggcaggaagtacagtaatatt
tgccttcatcggtaaggccccaggagacagcagcacactgagaacagcgg
tctctgaacgctttctgtggaagatagaaatctgttattgtcgggccaac
acactgcaccatggttctgaactctacttccagtgttcctggcaatttca
tccccccaaattaaaaaacaatcaaactaaaaatacacagacagtatcta
taaataaggagaatttagtctctctctcttttttttaagatttgtttatt
attataaataagtacactgttgctgtcttcagatgcaccagaagagggcg
tcagatctcattagggatggttgtgagccacaatgtggttactgggaatt
gaactcaagacctttggaagagcagtcagtgctcttactggctgagtcat
cttgccagcctgagtctcgtctctttagtagcatgaaaatgcagtaacta
ttccataaaactactgaaatatacagagtgagaacaaagaaagaaaggtg
gacagggctagtttggaaacaaagatttaggtaaactcttctgggagagc
tgagggagaaaaaggatgacccaccgtatggttgatcaaacaacaaagat
ggaaaacactgttgacttttttcttttggggcactgaggcagatgttgtc
gagttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_25062411_25063481
seq2: B6Ng01-045I08.b_63_1108

seq1  GCTGCACAGGACTCAGAACTGTACATACTGGTTCATGATAATACGAATCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCACAGGACTCAGAACTGTACATACTGGTTCATGATAATACGAATCC  50

seq1  AGTATGGACACCAGCGTGAGTATGATACTAAGCACTGTAGGGGAAGGTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGGACACCAGCGTGAGTATGATACTAAGCACTGTAGGGGAAGGTCA  100

seq1  AACTAGACCTTCTGAGTTCCCTGAGAGACACACCCCGTTTGCACGGAGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAGACCTTCTGAGTTCCCTGAGAGACACACCCCGTTTGCACGGAGGT  150

seq1  TGGTATCTAGTTCCAGTTACAACCAAAGAATCTTTCTAAGGCTCTGCCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATCTAGTTCCAGTTACAACCAAAGAATCTTTCTAAGGCTCTGCCTC  200

seq1  CCCTCACCAAAAGATACCAAGAGCCATGAGTGTGGGTCATGACAGCACCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCACCAAAAGATACCAAGAGCCATGAGTGTGGGTCATGACAGCACCC  250

seq1  ACAGGAGGAATCCTATCAGTGCTCCCCCAGCCATGGTTAATGCCCACTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAGGAATCCTATCAGTGCTCCCCCAGCCATGGTTAATGCCCACTCA  300

seq1  TCCAAGGATGAGAAGATCATTTGATCACCTCAGTTAAGTGTGGCCTTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGGATGAGAAGATCATTTGATCACCTCAGTTAAGTGTGGCCTTATT  350

seq1  AAATTAAGTTCAAAGAGGGGAGATGTTAGAGACCATACCGTAAAAAAGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAAGTTCAAAGAGGGGAGATGTTAGAGACCATACCGTAAAAAAGTA  400

seq1  GGCCTTTCACAGCTTCCCACCCTAACAAGCCAAATGGCCTTGTGCTAAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTTCACAGCTTCCCACCCTAACAAGCCAAATGGCCTTGTGCTAAGG  450

seq1  AGCAGGTCATCACACACCTACCTCCCTATTCCCTTCCTGGCACCTGAGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGTCATCACACACCTACCTCCCTATTCCCTTCCTGGCACCTGAGGC  500

seq1  AGTAAAAAGCTGAATTATAGTCCCCTCTTCTGTATCTCTCCCAGACTCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAAAAGCTGAATTATAGTCCCCTCTTCTGTATCTCTCCCAGACTCCC  550

seq1  AAGACTTCTAAGGACATGAGTTACGTGCTGAGCCCAGCCTGACACCCAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTTCTAAGGACATGAGTTACGTGCTGAGCCCAGCCTGACACCCAAG  600

seq1  GCTGTTAAGGAGGATTCTACATTCCAGAGATAAGACTCAGAGTGCCTGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTAAGGAGGATTCTACATTCCAGAGATAAGACTCAGAGTGCCTGCC  650

seq1  GCCTGCAGCCTGATTTCGGCCTTCATGTCCCCAGATGCCCACTTCTTTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCAGCCTGATTTCGGCCTTCATGTCCCCAGATGCCCACTTCTTTGT  700

seq1  TCTTTGTTAATTCCCCATCAACCCCTCCTTATTTTCCCCTGGCTGTGTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGTTAATTCCCCATCAACCCCTCCTTATTTTCCCCTGGCTGTGTGC  750

seq1  TTAAAACCTGGTGATTCAGCCTAATAAACTGAGACCTTGAGAGAAACCCC  800
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TTAAAACCTGGTGATTCAGCCTAATAAACTGAGACCTTGAGAG-AACCCC  799

seq1  TTCTTTGTCTCCACTTCTCATTCACTCCCTCTCATTTTCTCCCAGGTTTG  850
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TTCTTTGTCTCCACTTCTCA-TCACTCCCTCTCATTTTCTCCCAGGTTTG  848

seq1  CGGTCCCCCTCGCACCCACAAAAAAGTAGGTCCTGCTGGGCGGAACAATG  900
      |||| |||||||||||||| |||||||| |||||||||||||||   |||
seq2  CGGT-CCCCTCGCACCCAC-AAAAAGTA-GTCCTGCTGGGCGGA--CATG  893

seq1  GGAGACGCTGGGGTTTTGTGTTTGATTGTTGTCTTTTGAGATAGAGTCTT  950
      ||||||||| |||||||||| ||||||| ||||||||||||||||||| |
seq2  GGAGACGCT-GGGTTTTGTG-TTGATTG-TGTCTTTTGAGATAGAGTC-T  939

seq1  ATGCATCCCAGGCTGGCCTGATATAAAGATAATCTTGAGCTGGGCAATGA  1000
      |||||| ||||||||| |||| || ||||| ||||||||||||   ||||
seq2  ATGCAT-CCAGGCTGG-CTGA-ATTAAGAT-ATCTTGAGCTGG--CATGA  983

seq1  TGGTGCAGGACTTTAATCCCAACACTCAGGAGGCAGAGGTAGCTGAATCT  1050
      | ||||| |||||||||||| ||||||| |||   || || |||| ||| 
seq2  T-GTGCA-GACTTTAATCCC-ACACTCA-GAG--CGAAGTTGCTG-ATCC  1026

seq1  CTGATTTGCAGGCCAGCCTGG  1071
      |||||||||| | |||||| |
seq2  CTGATTTGCA-GTCAGCCTTG  1046

seq1: chr12_25184713_25185514
seq2: B6Ng01-045I08.g_68_873 (reverse)

seq1  AAACTCGAC-ACATCTGCCTCAGTGCCCCAAA--GAAAAAGTCAACAGTG  47
      ||||||||| ||||||||||||||||||||||   |||||||||||||||
seq2  AAACTCGACAACATCTGCCTCAGTGCCCCAAAAGAAAAAAGTCAACAGTG  50

seq1  TTTTCAATCTTTGTTTGCTTTGATCATCCATACGGTGGGTCATCC-TTTT  96
      ||||| |||||||||   |||||||| |||||||||||||||||| ||||
seq2  TTTTCCATCTTTGTT--GTTTGATCAACCATACGGTGGGTCATCCTTTTT  98

seq1  CTCCCTCAGCTCTCCCAG-AGAGTTTACCTATATCTTTGTTTCCAATCTA  145
      |||||||||||||||||| |||||||||||| |||||||||||||| |||
seq2  CTCCCTCAGCTCTCCCAGAAGAGTTTACCTAAATCTTTGTTTCCAAACTA  148

seq1  GCCCTGTCCACCTTTCTTTCTTTGTTCTCACTCTGTATATTTCAGTAGTT  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTGTCCACCTTTCTTTCTTTGTTCTCACTCTGTATATTTCAGTAGTT  198

seq1  TTATGGAATAGTTACTGCA-TTTCATGCTACTAAAGAGACGAGACTCAGG  244
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TTATGGAATAGTTACTGCATTTTCATGCTACTAAAGAGACGAGACTCAGG  248

seq1  CTGGCAAGATGACTCAGCCAGTAAGAGCACTGACTGCTCTTCCAAAGGTC  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCAAGATGACTCAGCCAGTAAGAGCACTGACTGCTCTTCCAAAGGTC  298

seq1  TTGAGTTCAATTCCCAGTAACCACATTGTGGCTCACAACCATCCCTAATG  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTTCAATTCCCAGTAACCACATTGTGGCTCACAACCATCCCTAATG  348

seq1  AGATCTGACGCCCTCTTCTGGTGCATCTGAAGACAGCAACAGTGTACTTA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTGACGCCCTCTTCTGGTGCATCTGAAGACAGCAACAGTGTACTTA  398

seq1  TTTATAATAATAAACAAATCTTAAAAAAAAGAGAGAGAGACTAAATTCTC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAATAATAAACAAATCTTAAAAAAAAGAGAGAGAGACTAAATTCTC  448

seq1  CTTATTTATAGATACTGTCTGTGTATTTTTAGTTTGATTGTTTTTTAATT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTTATAGATACTGTCTGTGTATTTTTAGTTTGATTGTTTTTTAATT  498

seq1  TGGGGGGATGAAATTGCCAGGAACACTGGAAGTAGAGTTCAGAACCATGG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGGATGAAATTGCCAGGAACACTGGAAGTAGAGTTCAGAACCATGG  548

seq1  TGCAGTGTGTTGGCCCGACAATAACAGATTTCTATCTTCCACAGAAAGCG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTGTGTTGGCCCGACAATAACAGATTTCTATCTTCCACAGAAAGCG  598

seq1  TTCAGAGACCGCTGTTCTCAGTGTGCTGCTGTCTCCTGGGGCCTTACCGA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAGACCGCTGTTCTCAGTGTGCTGCTGTCTCCTGGGGCCTTACCGA  648

seq1  TGAAGGCAAATATTACTGTACTTCCTGCCACAATGTCACAGATGTAAGTA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGCAAATATTACTGTACTTCCTGCCACAATGTCACAGATGTAAGTA  698

seq1  ATGTGCCATTCACGAACTTGATTATGTTCTCAAAATTGAAGTTTCCGGGT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCCATTCACGAACTTGATTATGTTCTCAAAATTGAAGTTTCCGGGT  748

seq1  GGTATGTGGCCTGACTCCTAAACAGTGCATCGGTATCACTCACTCAATGG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATGTGGCCTGACTCCTAAACAGTGCATCGGTATCACTCACTCAATGG  798

seq1  CTGAATTC  802
      ||||||||
seq2  CTGAATTC  806