BAC Information

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BAC

Clone NameB6Ng01-047P01
Chromosome12 (Build37)10 (Build37)
Map Location 95,097,752 - 95,097,92063,703,078 - 63,703,170
singlet/doubletsingletsinglet
Overlap genenone
Upstream genenone
Downstream gene2610022K04Rik-ps, EG633639
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-047P01.bB6Ng01-047P01.g
ACCDH872661DH872662
length55293
definitionDH872661|Mus musculus domesticus DNA, BAC clone: B6Ng01-047P01, 5' end.DH872662|Mus musculus domesticus DNA, BAC clone: B6Ng01-047P01, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(95,097,752 - 95,097,920)(63,703,078 - 63,703,170)
sequence
gaattcaatctctgctttccttctgtcatgtcaatctgcttgtctctgtt
gccaccagtttatcttatagaaatgtcggtcatgttagattagggttcca
ccttactcagcattagttctactgctttctttagacccaacccccccccc
cacacacacacacattgacttggagctgagacttcagaatgctttttgtg
aggtatatttcaatccagaacacacgcctatcaacagcatttgtcagcct
attactacctactccttgaaacagtctgacttggttactttttctgcctc
ctatgtaaccagctacagaatagtctcccttgtaggtttcagccattccc
aacttgtaaataatggaaagcccttagccttcatcttcagatcactttca
accctagttgatgtatatgacctagaagaactcacagatctttatggctt
tgtctttattagagacctttaccttaataaatgattggaatatgatatat
atgagagagaaatttatttgtaaatatttccatttggataaatacttcaa
aa
tctgtatttgtcttagttctaattttttaaaagttatttattagtgtttt
tgtttgagtgtgtgagtgtgtgtgtgtgtgagagagagtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_95097752_95097920
seq2: B6Ng01-047P01.b_182_596 (reverse)

seq1  --------------------------------------------------  0
                                                        
seq2  TTTTGAAGTATTTATCCAAATGGAAATATTTACAAATAAATTTCTCTCTC  50

seq1  --------------------------------------------------  0
                                                        
seq2  ATATATATCATATTCCAATCATTTATTAAGGTAAAGGTCTCTAATAAAGA  100

seq1  --------------------------------------------------  0
                                                        
seq2  CAAAGCCATAAAGATCTGTGAGTTCTTCTAGGTCATATACATCAACTAGG  150

seq1  ------------------------------------------TTTTGAAG  8
                                                |||  |||
seq2  GTTGAAAGTGATCTGAAGATGAAGGCTAAGGGCTTTCCATTATTTACAAG  200

seq1  T-----ATTTTTCATAAATCCAA--------ATTGCTGT---GGTTTGAA  42
      |     ||   | | |  | |||        ||| ||||    | ||  |
seq2  TTGGGAATGGCTGAAACCTACAAGGGAGACTATT-CTGTAGCTGGTTACA  249

seq1  TATGATTGGC-----------CCAGGGAAGAGTATT------ATCAGGAA  75
      || ||  |||           ||| |  ||| | ||      |  ||| |
seq2  TAGGA--GGCAGAAAAAGTAACCAAGTCAGACTGTTTCAAGGAGTAGGTA  297

seq1  GT-GTGGCCT---------TGTGGAAGTAGGTGTAGCCTTGCTAGA-GGA  114
      ||  | | ||         ||| ||  |||| || |  || || ||  ||
seq2  GTAATAGGCTGACAAATGCTGTTGA--TAGGCGT-GTGTT-CTGGATTGA  343

seq1  AATGT--GTCA-----------CTG-TGGCTTACCT----TACAATGATG  146
      ||| |   |||           |||  | || | ||      ||||| ||
seq2  AATATACCTCACAAAAAGCATTCTGAAGTCTCAGCTCCAAGTCAATG-TG  392

seq1  TGTGTGTGTGGGGGGGGGAGTTG  169
      |||||||||||||||||| ||||
seq2  TGTGTGTGTGGGGGGGGGGGTTG  415

seq1: chr10_63703078_63703170
seq2: B6Ng01-047P01.g_71_163

seq1  TCTGTATTTGTCTTAGTTCTAATTTTTTAAAAGTTATTTATTAGTGTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTATTTGTCTTAGTTCTAATTTTTTAAAAGTTATTTATTAGTGTTTT  50

seq1  TGTTTGAGTGTGTGAGTGTGTGTGTGTGTGAGAGAGAGTGTGT  93
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGAGTGTGTGAGTGTGTGTGTGTGTGAGAGAGAGTGTGT  93