BAC Information

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BAC

Clone NameB6Ng01-050D10
Chromosome12 (Build37)
Map Location 49,263,397 - 49,264,686
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039190, EG664891
Downstream geneGm1818, GA_x5J8B7W54VK-284379-285078, Olfr1399-ps1, EG665036
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-050D10.bB6Ng01-050D10.g
ACCDH874228DH874229
length1,1751,206
definitionDH874228|Mus musculus domesticus DNA, BAC clone: B6Ng01-050D10, 5' end.DH874229|Mus musculus domesticus DNA, BAC clone: B6Ng01-050D10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaggaccagaactaaagggaaaaaagccataaaggaatgctgttt
acttgtgttctctaccttttttcttattatatgaatgatcacactaggta
gcacctgccccctcaaattttgctcagccaacccacatcagtcattcatc
aaggcatttctagttgaaagctaatggtggcattttttttaagtgaggtt
cctcttccgagataattgtaactgtgtcatgttgacaaaaaactaggcaa
tacagaagcctagctaaagtgcagataacaagtgagtgcagagtgatcag
cccctaaagattcacctatatcacactctttcctcaaggcttagataaca
ttgtggaggaagtgcaggaagattgtcagaattacagggaaagtaaaacc
tctgaatgtagcaacttccatacatgacaggttcactgtgctaattaact
cacagtggtatgactgcctacaaaagacttatacaagatcagtcaaccaa
ctttcaggcattgattggggaatggatttgcatggcttagagattattga
agtagagacagtagaaagattgcaagagtcaggggaaagttcttgaagat
tgtgtctcctaaaaatataagtaaaaaatgtaactaaagctacacccata
atatctcaccaacttgactaaacatgacctgaacaagaactccacaagat
gactataaccatgctaacagtgaagtggagaatctcagagacctcagctc
tagaaaacaactacagtcaatgaagactaatgacagcagagaaataatcc
taatttcctttgatacaccaattggtatccattatcaaatgatcagccct
gatacatacatacagtatacatacagacagagagtttaaactaattttag
tatgcacacatgtgtacgtgatatgcatgtctgttgtatgtatgatggat
ggatgatgtatgatgcatgtgcaactacactagtaagaaaagaactatgc
gtgatgcaagcaggaggggtacaagaagatgaagacagtagacaggttcc
agtgactttgcactaattgtaagctctcggactgccgatctactagcgtg
atgacgccaagaggatcaatagtgaggcaagtacgtctactgaactagta
gcctgactccaagtaagctaaccat

gaattcttaaagacatcactatgggctaaaaaagccaggcatataatatg
tacatgtcccacacataagaaatttgaaaagtgatagaacagatcttaaa
tcaaatggcaatcatagaagtgaaaataaaatgttctatttcacatcttt
gcgataattacacacacacacacacacacacacacacacacacacacaca
catccttacatactccctaaacatgggcaaaacttggatgataaatttaa
aatacgtgtgaatttattgcttatatgtttatattactgtataagaaagt
attaaaagaaatgacataaacacataaagcttcaaaagttgtaaatcaat
tttgatttggtaaagaatatgtcaaaataatcaagaagtttatcaaatca
tataataggtgaaactattgctgaaaagacaaatattaagataacagaaa
atgagcagtcactgtgtgacttcttctggtgacacagtgttaactggaca
gcaatagtattttgtgaagcaacctaaactgaagataaagtaataacctg
ttaagaaattaattttaataattgtattaattgtaattattaaggaatat
gtacagacataattctaccctgactgaaaaacacatacattattcttagg
aaatgaagacttatacaagaggacatgaaacaaatacattttgtgaagaa
tgaaagagagagagagagagagagagagagagagagagagatatttctat
gatgtcagcatctgtgaggctgaaatagaagatcacaaattagagaaccc
agaagctaaacagcatggatttgtctaaagaaacaaagactgtaatttta
tttcagtaagtggaatatctggaagaaatataaaatgtgtaaatgataag
aatctggaatgaaatttctgtgataaagtgtgcttgttaattgggaaagc
aagctgtcaagtatcttgaggatgagcaagcataaagaaaaacaggaagt
ctagcatgaaaacttctggaattcatcagaaagaggaatactgaaggata
actgaaacaaaagataaaaaaattctaatgatcaagagaatggctctaat
atttaaactaggcggaacatcatgggaacgacgaatagaatggactattc
gagacgtggcaataacattaaagttggtaagccagtaatgtttaaggcaa
ttgtaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_49263397_49264686
seq2: B6Ng01-050D10.g_67_1272 (reverse)

seq1  TTACAATTTACCCCCATAAACATTCTACACTGGCTTACTAAACAATACAT  50
      ||||||||     || ||||||||    |||||||||| ||        |
seq2  TTACAATT----GCCTTAAACATT----ACTGGCTTACCAA-------CT  35

seq1  CTAATTAGTTATAAAAATTAGCCCAATGCTCAGAAAAATAAGTTTCCAAA  100
       ||||  |||||          |||   |||     ||||    |||  |
seq2  TTAAT--GTTAT--------TGCCACGTCTC----GAATA---GTCC--A  66

seq1  TTCT-TATGTCTGCTGTTTCCATGGAAATTGTCTCAGCCTAGTGTTTAAA  149
      |||| |  |||    ||| |||||     ||| || |||||  |||||||
seq2  TTCTATTCGTC----GTTCCCATG----ATGT-TCCGCCTA--GTTTAAA  105

seq1  AATAAATTAAAAGAAGCCATTTACTATGAAAATCATGTAGAGAATATTTT  199
       || |         |||||||  || ||   |||||    ||||| ||||
seq2  TATTA--------GAGCCATTCTCT-TG---ATCAT---TAGAAT-TTTT  139

seq1  TTATCTTTTGTTTCCGTGTATCCTTCCAGTGATCCTCCTTTCTGAATGAA  249
      |||||||||||||| || ||||||| ||||  |||| ||||||| ||| |
seq2  TTATCTTTTGTTTCAGT-TATCCTT-CAGTATTCCT-CTTTCTG-ATG-A  184

seq1  ATTCCAGAAGTTATCATGCTAGACTTCACTGTTTTTCTGTAATGCCCTGC  299
      |||||||||||| |||||||||||||| |||||||||| | ||| | |||
seq2  ATTCCAGAAGTTTTCATGCTAGACTTC-CTGTTTTTCT-TTATG-CTTGC  231

seq1  TCATCCCTCAAAGATACTTTGACAGCTTGCTTTTCCCCAAATAAACAAAG  349
      |||| |||| ||||||| |||||||||||||||  ||||| |||   |||
seq2  TCAT-CCTC-AAGATAC-TTGACAGCTTGCTTT--CCCAATTAA--CAAG  274

seq1  CACACTTTTATCACAGGAAATTTTCATTCCAGGATTTCTTATCATTTACA  399
      ||||| ||||||||||  || |||||||||||   |||||||||||||||
seq2  CACAC-TTTATCACAG--AAATTTCATTCCAG--ATTCTTATCATTTACA  319

seq1  CATTTTATATTTCTTCCAGATATTCCACCTACTGAAATAAAATTACAGTC  449
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CATTTTATATTTCTTCCAGATATTCCACTTACTGAAATAAAATTACAGTC  369

seq1  TTTGTTTCTTTAAGACAAATCCATGCTGTTTAGC-TCTGGGTTCTCTAAT  498
      ||||||||||| |||||||||||||||||||||| |||||||||||||||
seq2  TTTGTTTCTTT-AGACAAATCCATGCTGTTTAGCTTCTGGGTTCTCTAAT  418

seq1  TTGTGATTCTTCTATCTCAGCCTCACAGATGCTGACATCATAGAAATTAT  548
      |||||| |||||||| |||||||||||||||||||||||||||||||   
seq2  TTGTGA-TCTTCTATTTCAGCCTCACAGATGCTGACATCATAGAAAT--A  465

seq1  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTTCATTCTTCAC  598
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC-TTTCATTCTTCAC  514

seq1  AAAATGTATTTGTTTCATGTCCTCTTGTATAAGTCTTCATTTCCTAAGAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTATTTGTTTCATGTCCTCTTGTATAAGTCTTCATTTCCTAAGAA  564

seq1  TAATGTATGTGTTTTTCAGTCAGGGTAGAATTATGTCTGTACATATTCCT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTATGTGTTTTTCAGTCAGGGTAGAATTATGTCTGTACATATTCCT  614

seq1  TAATAATTACAATTAATACAATTATTAAAATTAATTTCTTAACAGGTTAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATTACAATTAATACAATTATTAAAATTAATTTCTTAACAGGTTAT  664

seq1  TACTTTATCTTCAGTTTAGGTTGCTTCACAAAATACTATTGCTGTCCAGT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTATCTTCAGTTTAGGTTGCTTCACAAAATACTATTGCTGTCCAGT  714

seq1  TAACACTGTGTCACCAGAAGAAGTCACACAGTGACTGCTCATTTTCTGTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACTGTGTCACCAGAAGAAGTCACACAGTGACTGCTCATTTTCTGTT  764

seq1  ATCTTAATATTTGTCTTTTCAGCAATAGTTTCACCTATTATATGATTTGA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTAATATTTGTCTTTTCAGCAATAGTTTCACCTATTATATGATTTGA  814

seq1  TAAACTTCTTGATTATTTTGACATATTCTTTACCAAATCAAAATTGATTT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTTCTTGATTATTTTGACATATTCTTTACCAAATCAAAATTGATTT  864

seq1  ACAACTTTTGAAGCTTTATGTGTTTATGTCATTTCTTTTAATACTTTCTT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTTTTGAAGCTTTATGTGTTTATGTCATTTCTTTTAATACTTTCTT  914

seq1  ATACAGTAATATAAACATATAAGCAATAAATTCACACGTATTTTAAATTT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGTAATATAAACATATAAGCAATAAATTCACACGTATTTTAAATTT  964

seq1  ATCATCCAAGTTTTGCCCATGTTTAGGGAGTATGTAAGGATGTGTGTGTG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCCAAGTTTTGCCCATGTTTAGGGAGTATGTAAGGATGTGTGTGTG  1014

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAATTATCGCAAAGATGT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAATTATCGCAAAGATGT  1064

seq1  GAAATAGAACATTTTATTTTCACTTCTATGATTGCCATTTGATTTAAGAT  1198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAGAACATTTTATTTTCACTTCTATGATTGCCATTTGATTTAAGAT  1114

seq1  CTGTTCTATCACTTTTCAAATTTCTTATGTGTGGGACATGTACATATTAT  1248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCTATCACTTTTCAAATTTCTTATGTGTGGGACATGTACATATTAT  1164

seq1  ATGCCTGGCTTTTTTAGCCCATAGTGATGTCTTTAAGAATTC  1290
      ||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTGGCTTTTTTAGCCCATAGTGATGTCTTTAAGAATTC  1206


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