BAC Information

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BAC

Clone NameB6Ng01-051B01
Chromosome12 (Build37)
Map Location 81,562,648 - 81,742,708
singlet/doubletdoublet
Overlap geneExdl2, 2310002D06Rik, Galntl1, LOC100041715, Erh
Upstream geneRad51l1, LOC100041968, LOC435309, LOC100041674, LOC666754, Zfp36l1, Actn1, Wdr22
Downstream geneSlc39a9, 3830431G21Rik, Gm1568, 4933426M11Rik, Sfrs5, Slc10a1, Smoc1, Slc8a3, LOC100042143, LOC100042148, EG214321, Hspe1-ps2, Adam4, 1810020G14Rik, Synj2bp, Adam21, Med6, Ttc9
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-051B01.bB6Ng01-051B01.g
ACCDH874820DH874821
length765902
definitionDH874820|Mus musculus domesticus DNA, BAC clone: B6Ng01-051B01, 5' end.DH874821|Mus musculus domesticus DNA, BAC clone: B6Ng01-051B01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(81,562,648 - 81,563,404)(81,741,805 - 81,742,708)
sequence
gaattcatatttaacctgtgggttgttcagtgacttatccctttgtgtga
tgtgtgagaatagcaccatgtctgagaggattttatagagttctaaaatt
attatgggcatttccctcaaatttctgtatcttcaaaagatgtcctctca
cttctcacattgtatgtgtgtgtgctcaagtgctactgtggatgtttcca
accagcctctaagcttcttgagtggacagaaaaagatgaaaatttataaa
caaaacaaaactccttcctttttgagatagcgtttcgtgtaacccaggct
tacctcaaatttatcattgtagcctgaggtctagatccccaccactgcat
aaacggggtgtggtggcccaagcctgcctgtaatcctaacacttgggaga
tggaagctggaagatcaggaatctaaggtcacctttgctcacattttgag
agttgagagccagattgtgctacacaacaccctgctttaacccccttaaa
aaaaaaatcaatcctgaatgaatggtttcatatatagacaatattgtggt
tgttatgaggatatagggaccaggagagatgacaacagtaaagagcactg
gttgctcttctggaggacccaggttcaattaacagcccccacacaatagc
tcaacactttctataatttttttttccttttcttttctttctttcttttt
tttttttttttggtttttttgagacagggttttctctgtgttagctcttg
gctgttctggaactt
gaattcatttctgtccccaaatatagtgagaactctgaagctgactcggc
tccccagtgagcaagagaggaaggctttcagtgaagtcctgctcctctgg
tacaatcaaagattttgtacattcaaagataaattatttgggtatgagct
ggccccttaaggcaagttatctagacgaatagttccataaataactttag
tgtggtgttcactatatacattttatattgttactttatcttacaccttg
atgtgggaggtaactcctgtataaaatgtggttccgctgttgtgctcaag
tcaggaaagaccttaggttgatacagtgattatagtatttcctgttctcc
tttaactactccatgtcttagtttttattgagttaagagagctagaggct
agtggagtcagaaaacgggttctaaaggttaataagaaaaaatgcaggag
cgggtatatttggagtttgagaaatgatccagagggtaaggggctgactt
agttaagggagttgtgagcccagcactgatagggaaacatgaactgcgga
tgagcaacctagtcagttatgttttagtaactaacatctgtgtcacgtca
cgtcgggggcttatgtggtgatgagaatttccgagtcgcatgttgggata
ttcattgacgttgtttttccccttcagtctcacaccattttgctggtaca
gcctaccaagaggccagagggcaggacttatgctgactatgagtctgtga
atgagtgcatggaaagtgagtgagcacaaaggtaatgagggggaggtttt
tacagtccctcacacactctgctctctgggggatgaaaagcatgagggaa
ctggatcttttttccccctacattcctcctttttttttgttgtttggttg
tc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_81562648_81563404
seq2: B6Ng01-051B01.b_41_804

seq1  GAATTCATATTTAACCTGTGGGTTGTTCAGTGACTTATCCCTTTGTGTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATATTTAACCTGTGGGTTGTTCAGTGACTTATCCCTTTGTGTGA  50

seq1  TGTGTGAGAATAGCACCATGTCTGAGAGGATTTTATAGAGTTCTAAAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGAGAATAGCACCATGTCTGAGAGGATTTTATAGAGTTCTAAAATT  100

seq1  ATTATGGGCATTTCCCTCAAATTTCTGTATCTTCAAAAGATGTCCTCTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGGGCATTTCCCTCAAATTTCTGTATCTTCAAAAGATGTCCTCTCA  150

seq1  CTTCTCACATTGTATGTGTGTGTGCTCAAGTGCTACTGTGGATGTTTCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCACATTGTATGTGTGTGTGCTCAAGTGCTACTGTGGATGTTTCCA  200

seq1  ACCAGCCTCTAAGCTTCTTGAGTGGACAGAAAAAGATGAAAATTTATAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGCCTCTAAGCTTCTTGAGTGGACAGAAAAAGATGAAAATTTATAAA  250

seq1  CAAAACAAAACTCCTTCCTTTTTGAGATAGCGTTTCGTGTAACCCAGGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACAAAACTCCTTCCTTTTTGAGATAGCGTTTCGTGTAACCCAGGCT  300

seq1  TACCTCAAATTTATCATTGTAGCCTGAGGTCTAGATCCCCACCACTGCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCAAATTTATCATTGTAGCCTGAGGTCTAGATCCCCACCACTGCAT  350

seq1  AAACGGGGTGTGGTGGCCCAAGCCTGCCTGTAATCCTAACACTTGGGAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACGGGGTGTGGTGGCCCAAGCCTGCCTGTAATCCTAACACTTGGGAGA  400

seq1  TGGAAGCTGGAAGATCAGGAATCTAAGGTCACCTTTGCTCACATTTTGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGCTGGAAGATCAGGAATCTAAGGTCACCTTTGCTCACATTTTGAG  450

seq1  AGTTGAGAGCCAGATTGTGCTACACAACACCCTGCTTTAACCCCCTTAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGAGAGCCAGATTGTGCTACACAACACCCTGCTTTAACCCCCTTAAA  500

seq1  AAAAAAATCAATCCTGAATGAATGGTTTCATATATAGACAATATTGTGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAATCAATCCTGAATGAATGGTTTCATATATAGACAATATTGTGGT  550

seq1  TGTTATGAGGATATAGGGACCAGGAGAGATGACAACAGTAAAGAGCACTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATGAGGATATAGGGACCAGGAGAGATGACAACAGTAAAGAGCACTG  600

seq1  GTTGCTCTTCTGGAGGACCCAGGTTCAATTAACAGCCCCCACACAATAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCTCTTCTGGAGGACCCAGGTTCAATTAACAGCCCCCACACAATAGC  650

seq1  TCAACACTTTCTATAA-TTTTTTTTCCTTTTCTTTTCTTTCTTTCTTTTT  699
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TCAACACTTTCTATAATTTTTTTTTCCTTTTCTTTTCTTTCTTTCTTTTT  700

seq1  TTTTTTTTT---GGTTTTTTGAGACAGGG-TTTCTCTGTG-TAGCTC-TG  743
      |||||||||   | ||||||||||||||| |||||||||| |||||| ||
seq2  TTTTTTTTTTTGGTTTTTTTGAGACAGGGTTTTCTCTGTGTTAGCTCTTG  750

seq1  GCTGTTCTGGAACT  757
      ||||||||||||||
seq2  GCTGTTCTGGAACT  764

seq1: chr12_81741805_81742708
seq2: B6Ng01-051B01.g_65_966 (reverse)

seq1  GACAAACAAACAAACAAAAAGAAATGAAGAAATGTAGGGGGAAAAAGATT  50
      ||||| ||||| |||||||| ||| | || ||||||||||||||||   |
seq2  GACAACCAAAC-AACAAAAA-AAAAGGAGGAATGTAGGGGGAAAAAAGAT  48

seq1  CCAGTTCCCACATGCTATTCATCCCCCAGAGAGCAGCGTGTGTGAGGGAC  100
      ||||||||| |||||| ||||||||||||||||||| |||||||||||||
seq2  CCAGTTCCCTCATGCTTTTCATCCCCCAGAGAGCAGAGTGTGTGAGGGAC  98

seq1  TGTAAAAACCTCCCCCTCATTACCTTTGTGCTCACTCACCTTCCATGCAC  150
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TGTAAAAACCTCCCCCTCATTACCTTTGTGCTCACTCACTTTCCATGCAC  148

seq1  TCATTCACAGACTCATAGTCAGCATAAGTCCTGCCCTCTGGCCTCTTGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCACAGACTCATAGTCAGCATAAGTCCTGCCCTCTGGCCTCTTGGT  198

seq1  AGGCTGTACCAGCAAAATGGTGTGAGACTGAAGGGGAAAAACAACGTCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGTACCAGCAAAATGGTGTGAGACTGAAGGGGAAAAACAACGTCAA  248

seq1  TGAATATCCCAACATGCGACTCGGAAATTCTCATCACCACATAAGCCCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATATCCCAACATGCGACTCGGAAATTCTCATCACCACATAAGCCCCC  298

seq1  GACGTGACGTGACACAGATGTTAGTTACTAAAACATAACTGACTAGGTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGTGACGTGACACAGATGTTAGTTACTAAAACATAACTGACTAGGTTG  348

seq1  CTCATCCGCAGTTCATGTTTCCCTATCAGTGCTGGGCTCACAACTCCCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCCGCAGTTCATGTTTCCCTATCAGTGCTGGGCTCACAACTCCCTT  398

seq1  AACTAAGTCAGCCCCTTACCCTCTGGATCATTTCTCAAACTCCAAATATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAAGTCAGCCCCTTACCCTCTGGATCATTTCTCAAACTCCAAATATA  448

seq1  CCCGCTCCTGCATTTTTTCTTATTAACCTTTAGAACCCGTTTTCTGACTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGCTCCTGCATTTTTTCTTATTAACCTTTAGAACCCGTTTTCTGACTC  498

seq1  CACTAGCCTCTAGCTCTCTTAACTCAATAAAAACTAAGACATGGAGTAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAGCCTCTAGCTCTCTTAACTCAATAAAAACTAAGACATGGAGTAGT  548

seq1  TAAAGGAGAACAGGAAATACTATAATCACTGTATCAACCTAAGGTCTTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGAGAACAGGAAATACTATAATCACTGTATCAACCTAAGGTCTTTC  598

seq1  CTGACTTGAGCACAACAGCGGAACCACATTTTATACAGGAGTTACCTCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTTGAGCACAACAGCGGAACCACATTTTATACAGGAGTTACCTCCC  648

seq1  ACATCAAGGTGTAAGATAAAGTAACAATATAAAATGTATATAGTGAACAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCAAGGTGTAAGATAAAGTAACAATATAAAATGTATATAGTGAACAC  698

seq1  CACACTAAAGTTATTTATGGAACTATTCGTCTAGATAACTTGCCTTAAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTAAAGTTATTTATGGAACTATTCGTCTAGATAACTTGCCTTAAGG  748

seq1  GGCCAGCTCATACCCAAATAATTTATCTTTGAATGTACAAAATCTTTGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGCTCATACCCAAATAATTTATCTTTGAATGTACAAAATCTTTGAT  798

seq1  TGTACCAGAGGAGCAGGACTTCACTGAAAGCCTTCCTCTCTTGCTCACTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACCAGAGGAGCAGGACTTCACTGAAAGCCTTCCTCTCTTGCTCACTG  848

seq1  GGGAGCCGAGTCAGCTTCAGAGTTCTCACTATATTTGGGGACAGAAATGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGCCGAGTCAGCTTCAGAGTTCTCACTATATTTGGGGACAGAAATGA  898

seq1  ATTC  904
      ||||
seq2  ATTC  902