BAC Information

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BAC

Clone NameB6Ng01-052K10
Chromosome12 (Build37)
Map Location 31,949,499 - 32,096,211
singlet/doubletdoublet
Overlap geneLamb1-1, Dld
Upstream geneSntg2, Tmem18, LOC100043055, Acp1, Sh3yl1, LOC629656, 9030611O19Rik, LOC668781, LOC100043065, LOC100043514, EG629667, LOC100043068
Downstream geneLOC668786, Slc26a3, Cbll1, Slc26a4, LOC100043531, Bcap29, Dus4l, LOC100043081, Gpr22, Hbp1, Prkar2b, Pik3cg, 2010109K11Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-052K10.bB6Ng01-052K10.g
ACCDH875939DH875940
length638987
definitionDH875939|Mus musculus domesticus DNA, BAC clone: B6Ng01-052K10, 5' end.DH875940|Mus musculus domesticus DNA, BAC clone: B6Ng01-052K10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,095,582 - 32,096,211)(31,949,499 - 31,950,489)
sequence
ccctttttccccctaaaaagctctgattgcatatatagatccctctgcct
gggacaatcgcgacttcatccttctgctcttgaatcgtaagaatacttcc
acaaagcggccttccttgacctgccctattttatcctccctccgggatct
ttgcgcttttatttcttcatgtttatcatgagatgtgaccctgtacttgt
atatgtgtgtcccctttaaatgacatgactgtttctgtgctgctgttgaa
cttcctgtcccaagtgcattatctagtacataaaaaacgatccataaatt
cctcaaatgaatgtttgatgagtgcttactgttttgccaatatttgccag
acaagcgagttcagtttatttattctgtttatttattccccaatactcca
ttcaatatttgtccagtgactatttctgtaaatgttgggtcttaaaatga
atagaacacaatccctgccattgagggggtcccaaatgggagaatatagg
gtacagaatggtggctcctaaaatatcagatcttcaccctttcttagaac
ctgtgtcatcattatttggaaaaagtcctttacagatgtgatataggatc
ttaagatggggtaaaggattgtattactttattcaggt
gaattcagagctataaccccctgggtaccagagattataggtacgtcccg
aataaattcgtgcgcaaagaatgtgcagccactggtgtccttcctatgaa
ataggaagacaccacacatgtagcacccacccacgcaaagctctagctct
ttgatcctgagtcgtggtgtaaggatgcttataggagctcaagttcctaa
gagccagacaggttgaccctttttctaagggcttaacctagctcacctcc
ctctagcgctagttgccagagttcctagccttgggcacatttcgtgactc
acttcttataaacgtaaatgtataagtccgcggtaggtcctaccggcccc
ctttgccggccgatctacacacctacctccgggaccagccccgacgcatc
cctccccagcttgctccacttgggaagcgcgcccagaaacggacccgcca
gcccacgctgggaactcaagtaccaatgccctacagcttcagcagacgct
gccttaaaacaaaagaggcgcctggggaggtgggacctggacctcaaccc
ccacccctagccaacttgctgtcctccgccccctccgcccccgctctcca
tgtgcgcatgagcagagacgcctccctcggttcctccctaggcgaaactt
tctaattcccttctttgggccggtgggctgccaggagcgggttgagcgct
cgcccagccgggtgaggagaacaaagtagtaaagcgactttgaccccctt
cctgggcccagcccccgcttccgtgggagcggcaggaaatggaagggccc
ctctcctctctcccacatttgcctttttctccccgctacctcttcagaag
gaagacccgaagaaaagacaggcagcttgcctgctgcgtccttcttcccg
tgccgcgtcccctcgtctgcgaggactggacatggggctgctcaggtgtt
cgcttttgtgtcctaggtactcattagggttgggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_32095582_32096211
seq2: B6Ng01-052K10.b_6_638 (reverse)

seq1  ACCTGGATAAAGTAATACAATCCTTTCCCCCATCTTAAGATCCTCTATCA  50
      ||||| |||||||||||||||||||| ||||||||||||||||| |||||
seq2  ACCTGAATAAAGTAATACAATCCTTTACCCCATCTTAAGATCCTATATCA  50

seq1  CATCTGTAAAGGACTTTTTCCAAATAATGGTGACACAGGTTCTAAGAAAG  100
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CATCTGTAAAGGACTTTTTCCAAATAATGATGACACAGGTTCTAAGAAAG  100

seq1  GGTGAAGATCTGATATTTTAGGAGCCACCATTCTGTACCCTATATTCTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAAGATCTGATATTTTAGGAGCCACCATTCTGTACCCTATATTCTCC  150

seq1  CATTTGGGACCCCCTCAATGGCAGGGATTGTGTTCTATTCATTTTAAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGGGACCCCCTCAATGGCAGGGATTGTGTTCTATTCATTTTAAGAC  200

seq1  CCAACATTTACAGTAATAGTCACTGGACAAATATTGAATGGAGTATTGGG  250
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CCAACATTTACAGAAATAGTCACTGGACAAATATTGAATGGAGTATTGGG  250

seq1  GAATAAATAAACAGAATAAATAAACTGAACTCGCTTGTCTGGCAAATATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAAATAAACAGAATAAATAAACTGAACTCGCTTGTCTGGCAAATATT  300

seq1  GGCAAAACAGTAAGCACTCATCAAACATTCATTTGAGGAATTTATGGATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAAACAGTAAGCACTCATCAAACATTCATTTGAGGAATTTATGGATC  350

seq1  GTTTTTTATGTACTAGATAATGCACTTGGGACAGGAAGTTCAACAGCAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTATGTACTAGATAATGCACTTGGGACAGGAAGTTCAACAGCAGC  400

seq1  ACAGAAACAGTCATGTCATTTAAAGGGGACACACATATACAAGTACAGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAACAGTCATGTCATTTAAAGGGGACACACATATACAAGTACAGGG  450

seq1  TCACATCTCATGATAAACATGAAGAAATAAAAGCGCAAAGATCCCGGAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATCTCATGATAAACATGAAGAAATAAAAGCGCAAAGATCCCGGAGG  500

seq1  GAGGATAAAATAGGGCAGGTCAAGGAAGGCCGCTTTGTGGAAGTATTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATAAAATAGGGCAGGTCAAGGAAGGCCGCTTTGTGGAAGTATTCTT  550

seq1  ACGATTCAAGAGCAGAAGGATGAAGTCGCGATTGTCCCAGGCAGAGGGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGATTCAAGAGCAGAAGGATGAAGTCGCGATTGTCCCAGGCAGAGGGAT  600

seq1  CTACATATGC-ATCAG----CTTTAGGGAAGGAAA  630
      ||| |||||| |||||     |||||||  |||||
seq2  CTATATATGCAATCAGAGCTTTTTAGGG--GGAAA  633

seq1: chr12_31949499_31950489
seq2: B6Ng01-052K10.g_68_1054

seq1  GAATTCAGAGCTATAACCCCCTGGGTACCAGAGATTATAGGTACGTCCCG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAGCTATAACCCCCTGGGTACCAGAGATTATAGGTACGTCCCG  50

seq1  AATAAATTCGTGCGCAAAGAATGTGCAGCCACTGGTGTCCTTCCTATGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATTCGTGCGCAAAGAATGTGCAGCCACTGGTGTCCTTCCTATGAA  100

seq1  ATAGGAAGACACCACACATGTAGCACCCACCCACGCAAAGCTCTAGCTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGAAGACACCACACATGTAGCACCCACCCACGCAAAGCTCTAGCTCT  150

seq1  TTGATCCTGAGTCGTGGTGTAAGGATGCTTATAGGAGCTCAAGTTCCTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATCCTGAGTCGTGGTGTAAGGATGCTTATAGGAGCTCAAGTTCCTAA  200

seq1  GAGCCAGACAGGTTGACCCTTTTTCTAAGGGCTTAACCTAGCTCACCTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCAGACAGGTTGACCCTTTTTCTAAGGGCTTAACCTAGCTCACCTCC  250

seq1  CTCTAGCGCTAGTTGCCAGAGTTCCTAGCCTTGGGCACATTTCGTGACTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGCGCTAGTTGCCAGAGTTCCTAGCCTTGGGCACATTTCGTGACTC  300

seq1  ACTTCTTATAAACGTAAATGTATAAGTCCGCGGTAGGTCCTACCGGCCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTTATAAACGTAAATGTATAAGTCCGCGGTAGGTCCTACCGGCCCC  350

seq1  CTTTGCCGGCCGATCTACACACCTACCTCCGGGACCAGCCCCGACGCATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCCGGCCGATCTACACACCTACCTCCGGGACCAGCCCCGACGCATC  400

seq1  CCTCCCCAGCTTGCTCCACTTGGGAAGCGCGCCCAGAAACGGACCCGCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCCAGCTTGCTCCACTTGGGAAGCGCGCCCAGAAACGGACCCGCCA  450

seq1  GCCCACGCTGGGAACTCAAGTACCAATGCCCTACAGCTTCAGCAGACGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCACGCTGGGAACTCAAGTACCAATGCCCTACAGCTTCAGCAGACGCT  500

seq1  GCCTTAAAACAAAAGAGGCGCCTGGGGAGGTGGGACCTGGACCTCAACCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTAAAACAAAAGAGGCGCCTGGGGAGGTGGGACCTGGACCTCAACCC  550

seq1  CCACCCCTAGCCAACTTGCTGTCCTCCGCCCCCTCCGCCCCCGCTCTCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCCTAGCCAACTTGCTGTCCTCCGCCCCCTCCGCCCCCGCTCTCCA  600

seq1  TGTGCGCATGAGCAGAGACGCCTCCCTCGGTTCCTCCCTAGGCGAAACTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCGCATGAGCAGAGACGCCTCCCTCGGTTCCTCCCTAGGCGAAACTT  650

seq1  TCTAATTCCCTTCTTTGGGCCGGTGGGCTGCCAGGAGCGGGTTGAGCGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATTCCCTTCTTTGGGCCGGTGGGCTGCCAGGAGCGGGTTGAGCGCT  700

seq1  CGCCCAGCCGGGTGAGGAGAACAAAGTAGTTAAGCGAC-TTGACCCCCTT  749
      |||||||||||||||||||||||||||||| ||||||| |||||||||||
seq2  CGCCCAGCCGGGTGAGGAGAACAAAGTAGTAAAGCGACTTTGACCCCCTT  750

seq1  CCTGGGCCCAGCCCCCGCTTCCGTGGGAGCGGCAGGAAATGGAAGGGCCC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGCCCAGCCCCCGCTTCCGTGGGAGCGGCAGGAAATGGAAGGGCCC  800

seq1  CTCTCCTCTCTCCCAACATTTGCC-TTTTCTCCCCGCTACCTCTCCAGAA  848
      |||||||||||||| ||||||||| ||||||||||||||||||| ||| |
seq2  CTCTCCTCTCTCCC-ACATTTGCCTTTTTCTCCCCGCTACCTCTTCAG-A  848

seq1  AGGAAGACCCGAAGAAAAGACAGGCAGCTTGCCTGCTGCGTCCTCCTTCC  898
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  AGGAAGACCCGAAGAAAAGACAGGCAGCTTGCCTGCTGCGTCCTTCTTCC  898

seq1  CGTGCCGCGTCCCCTCGTCTGCGAGGACTGGACATGGGGCTGCTCCAGGT  948
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CGTGCCGCGTCCCCTCGTCTGCGAGGACTGGACATGGGGCTGCT-CAGGT  947

seq1  GTTCGCCTTTGGTGTCCTAGGTAACTCAGTAAGGGTTGGGGGG  991
      ||||| |||| ||||||||||| ||||| | ||||||||||||
seq2  GTTCG-CTTTTGTGTCCTAGGT-ACTCA-TTAGGGTTGGGGGG  987