BAC Information

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BAC

Clone NameB6Ng01-053G06
Chromosome12 (Build37)
Map Location 8,301,974 - 8,302,833
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668380, EG668388, Apob, 1110057K04Rik
Downstream geneGdf7, Hs1bp3, BC106175, Rhob, Slc7a15, LOC100043154, Pum2, F730043H23, Sdc1, Laptm4a, Matn3, Wdr35, Ttc32
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-053G06.bB6Ng01-053G06.g
ACCDH876453DH876454
length1,262859
definitionDH876453|Mus musculus domesticus DNA, BAC clone: B6Ng01-053G06, 5' end.DH876454|Mus musculus domesticus DNA, BAC clone: B6Ng01-053G06, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaatactaaatggctgagaagcacctgaaaaaaat
gttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgaga
ttgcacctcacaatagtcagaatggctaagatcaaaaattcaggtgacag
cagatgctggcgaggatgtggagaaagaggaacactcctccattgttggt
gggattgcaggcttgtacaaccactctggaaatcagtctggcagttcctc
agaaaattggacatagtactaccggaggattcagcaatacctctcctggg
catatatccagaagatgtcccaaccggtaagaaggacacatgctccacta
tgttcatagcagccttatttataatagccagaagctggaaagaacccaga
tgcccctcaacagaggaatggatacagaaaatgtggtacatttacacaat
ggagtactactcagctattaaaaagaatgaatttatgaaattcctagcca
aatggatggacctggagggcatcatcctgagtgaggtaacacattcacaa
aggaactcacacaatatgtactcactgataagtggatattagcccaaaac
ctaggatacccaagatataagatacaatttgtacaaccactctggaaatc
agtctgaaaactggaggatcccgcaatacctctcctgggcatatatccag
aaaatgttccaactggtaataatgacacatgctttcacgatgttcatagc
agccttatttataatagccagaagccagaaagaacccagatgcctctcaa
cagaggaatggatacagaaaatgtggtacatttacacaatggagtgctac
tcagctattaaaaagaatggatttatgaaattactagacaaatgtatgga
cctggaggtttcctcctgagtgaggtaacccatcacaaaaaactcacctg
atatatactcactgataagtatattacccagaaactagataccaagttac
taacaatgaaactcaagaagacgaagaccaagtgggatcactttgcccct
tcttaaattcagaacaaaaccctcatgggagatttcagagacaaagttgt
agctgagagtgaggatggatctgtctaagaacgtgctgctatcggattca
tccataatactccaatggcttccttgattatcccccagactttctaagac
ctggattcgtctctgaagctatgccaggttcgtgcaaagggatgtacgca
ccctccatgtat
gaattccctgcgttgaggctgcacccacagaagggtactgtcactagaat
ggtcaacattgtgcactgggttgtagtgttcatgtcgtgcctctgaggcc
tcaggtgtttgctgaatgatcagaacttctcccagggttcccttgatcct
tcgtggatcctttgtggaactagaaacagggctcttcttctggttctgtc
tcctgtagccattctctagaggatgtattttatgaccacaaaagggccaa
ccgcatgtggggcagatgggatgtggttaaactagcttgccaagaggcgg
agaaaggctgctgcctgcacagttgggaacactcttcaacatctgctttg
tcatctaggctttaagaggggcgggtgaccaggacaaactcagctgcatc
ctggaatccctgtctggatgctgtagtcagcacagaccatgtcagttagg
gtgtcccctcctgcccagcctgaggtcaccaaagcctcccttccgaagta
aacagaattctccacgttgctgggaacctgaaccactgcttgaagtgagg
gaggctgacaggcctgctaaggaagtaggggaggccagctggactctcag
tcctgccagacaccaaactggtctggtttgctgcttgaagccataattta
tggattaaggtagccccctccattagcaggaaggcattttcaggattcct
agactctggtcttgtgggatttggggttaccaagcagttggtctggacca
agcagagcgggtggtcggctacttaatcttattgtgaggaagagtgtctg
gagctgtgctgtgctgtatgttcatgcttggccttggcccactttcttgg
catttcatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_8301974_8302833
seq2: B6Ng01-053G06.g_68_926 (reverse)

seq1  CATGAAATGCCAGGAAAGTGGGCCAAGGCCAAGCATGAACACTACAGCAC  50
      |||||||||||| |||||||||||||||||||||||||||| ||||||||
seq2  CATGAAATGCCAAGAAAGTGGGCCAAGGCCAAGCATGAACA-TACAGCAC  49

seq1  AGCACAGCTCCAGACACTCTTCCTCACAATAAGATTAAGTAGCCGACCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACAGCTCCAGACACTCTTCCTCACAATAAGATTAAGTAGCCGACCAC  99

seq1  CCGCTCTGCTTGGTCCAGACCAACTGCTTGGTAACCCCAAATCCCACAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCTCTGCTTGGTCCAGACCAACTGCTTGGTAACCCCAAATCCCACAAG  149

seq1  ACCAGAGTCTAGGAATCCTGAAAATGCCTTCCTGCTAATGGAGGGGGCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGAGTCTAGGAATCCTGAAAATGCCTTCCTGCTAATGGAGGGGGCTA  199

seq1  CCTTAATCCATAAATTATGGCTTCAAGCAGCAAACCAGACCAGTTTGGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAATCCATAAATTATGGCTTCAAGCAGCAAACCAGACCAGTTTGGTG  249

seq1  TCTGGCAGGACTGAGAGTCCAGCTGGCCTCCCCTACTTCCTTAGCAGGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCAGGACTGAGAGTCCAGCTGGCCTCCCCTACTTCCTTAGCAGGCC  299

seq1  TGTCAGCCTCCCTCACTTCAAGCAGTGGTTCAGGTTCCCAGCAACGTGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGCCTCCCTCACTTCAAGCAGTGGTTCAGGTTCCCAGCAACGTGGA  349

seq1  GAATTCTGTTTACTTCGGAAGGGAGGCTTTGGTGACCTCAGGCTGGGCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTTACTTCGGAAGGGAGGCTTTGGTGACCTCAGGCTGGGCAG  399

seq1  GAGGGGACACCCTAACTGACATGGTCTGTGCTGACTACAGCATCCAGACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGACACCCTAACTGACATGGTCTGTGCTGACTACAGCATCCAGACA  449

seq1  GGGATTCCAGGATGCAGCTGAGTTTGTCCTGGTCACCCGCCCCTCTTAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATTCCAGGATGCAGCTGAGTTTGTCCTGGTCACCCGCCCCTCTTAAA  499

seq1  GCCTAGATGACAAAGCAGATGTTGAAGAGTGTTCCCAACTGTGCAGGCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAGATGACAAAGCAGATGTTGAAGAGTGTTCCCAACTGTGCAGGCAG  549

seq1  CAGCCTTTCTCCGCCTCTTGGCAAGCTAGTTTAACCACATCCCATCTGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTTTCTCCGCCTCTTGGCAAGCTAGTTTAACCACATCCCATCTGCC  599

seq1  CCACATGCGGTTGGCCCTTTTGTGGTCATAAAATACATCCTCTAGAGAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATGCGGTTGGCCCTTTTGTGGTCATAAAATACATCCTCTAGAGAAT  649

seq1  GGCTACAGGAGACAGAACCAGAAGAAGAGCCCTGTTTCTAGTTCCACAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTACAGGAGACAGAACCAGAAGAAGAGCCCTGTTTCTAGTTCCACAAA  699

seq1  GGATCCACGAAGGATCAAGGGAACCCTGGGAGAAGTTCTGATCATTCAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCCACGAAGGATCAAGGGAACCCTGGGAGAAGTTCTGATCATTCAGC  749

seq1  AAACACCTGAGGCCTCAGAGGCACGACATGAACACTACAACCCAGTGCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACCTGAGGCCTCAGAGGCACGACATGAACACTACAACCCAGTGCAC  799

seq1  AATGTTGACCATTCTAGTGACAGTACCCTTCTGTGGGTGCAGCCTCAACG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTGACCATTCTAGTGACAGTACCCTTCTGTGGGTGCAGCCTCAACG  849

seq1  CAGGGAATTC  860
      ||||||||||
seq2  CAGGGAATTC  859