BAC Information

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BAC

Clone NameB6Ng01-053O24
Chromosome12 (Build37)
Map Location 26,358,194 - 26,514,204
singlet/doubletdoublet
Overlap geneLOC668726
Upstream geneCys1, Rrm2, LOC668719, Mboat2, EG629397, C330002I19Rik, Id2, LOC100042973, LOC100042974
Downstream geneRnf144, Rsad2, Tyki, LOC668731, 1700020D12Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-053O24.bB6Ng01-053O24.g
ACCDH876834DH876835
length1,0441,009
definitionDH876834|Mus musculus domesticus DNA, BAC clone: B6Ng01-053O24, 5' end.DH876835|Mus musculus domesticus DNA, BAC clone: B6Ng01-053O24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(26,513,164 - 26,514,204)(26,358,194 - 26,359,212)
sequence
gaattccaaagcacaaacaccaatgagcttttgagagtcaaacatggaga
agagcaaaaatgaaaatccaaagatgcagggagtgagacaaagaaaaaaa
aaaaaactaatctcctactgatgcgaagacacccgtgtttcatccagcag
ccttggccttatggggcctgggaatctgaagaaaaaaaaaatgatgttac
cttaacatacccagagaggaagcagatgcctttactctacctgccagaag
tatgcaggaggacttcccacttcccaaggccctggagaaaagcagtgtgg
tgcagagaggaacatctgaatggaaggcaagctgtagcttcagaggaagg
ggtggcctgggaagtgggctctcatttgatcatttgactcagcgatctaa
agaagatggtccagagaaatatgggcaagtcaatttctccgttgtatttt
ccaggcatgtgtttaagagagttgccctgggcacgtgcactctgcctgtg
cgaaaacccctttgtctggatgactctgctcccagagtttgcatggtcag
tctctaactctcaatgcttgaggctctgagtggtcataaagataggacct
ttaagaagacaaaggatagggtatggttctattgggaaagagattccttt
gcaagcatgaaaatcagagctcagttctcagcacttattggtaaaattga
aacagccaggatggtaatatccatttgtaacacctacaatcaggaaatag
gaggattcataggctctccatggccagccagtttagcctaatcagtcagc
ctcagtccagtatgagaccctgtctcaaaatatgatgtattggcactctg
ggggacaatttctgaggttttcttctggtccctatatacacacacatact
tatacctgtgtgtgcatgcattagtgcatacacatagaaacttgccatca
tacataaattcagaatttaaatgatgtacctagcatacattggaatcctc
ggggctggcatttattattggatgacctgaggacgtggttctcc
gaattcctcagacccctttccttgggcactgcacttttccattttattgc
tactgacttctttgattatttctaggctagccttcctgaagaccatccta
tggtacatagagagttgagatgggaaacatctatataccatcttatggta
catagagagttatactttgcattctgggaaaagaggatttaacgtggcaa
tgagatcctctgggagaagatcaaaggatatctgctggcaaatactagat
ccggagaccttggccagagagaggacatggaacacagaactgttcccgga
ggcttcctaggaagccttagggatgctccagtgtctaagaaagcagcttg
taggagtggccctggtacttatgagaagccttagggagcccacgtggact
ctagggactggctgctgactgaagataaaccagtaacttctttctctcgt
ctgcttctagagccaccaggatttctcctttggggaaaccctaggggtac
ccaagaatgccattctcctcagcatccttttcctgcatgggaaggggtga
agacaagcatcagctacctgtcacccatcccctttgctctgcctcacaca
caaaacaactcctgtcacttctggacctcacttcaggacaccttcagtgt
cacaggcttaccttacacttcctaaagagccagtctggaccttgtctttt
gtagtgaggccctcatgatgctttgatgcttccctcattgatcgtattat
gatttgtgaatattaatttgttgatttgattttttatgggtctttatact
acgggacaggtattcagcttgctttttctactatttatctaatttctagc
acgcctgaataaattctttttttttctttaatattttttattacgtattt
tcctcatacattttcatgctatcccaaaaagtccccatacctcccccatc
cctaccacccattcccattttttggccctggcttcccctgtatgggggca
tataaagtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_26513164_26514204
seq2: B6Ng01-053O24.b_46_1089 (reverse)

seq1  GGAG-ACCACGTCCTCAGGTCATCCAATAATAAATGCAAGCACAGAGGAT  49
      |||| |||||||||||||||||||||||||||||||| ||| | ||||||
seq2  GGAGAACCACGTCCTCAGGTCATCCAATAATAAATGCCAGCCCCGAGGAT  50

seq1  TCAAATGTATGCTAGGTAACTCATTTAAATTCTGAATTTATGTATGATGG  99
      || |||||||||||||||  ||||||||||||||||||||||||||||||
seq2  TCCAATGTATGCTAGGTACATCATTTAAATTCTGAATTTATGTATGATGG  100

seq1  CATGTTTCTATGTGTATGCACTAATGCATGCACACACAGGTATAAGTATG  149
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTTCTATGTGTATGCACTAATGCATGCACACACAGGTATAAGTATG  150

seq1  TGTGTGTATATAGGGACCAGAGGAAAACCTCAGAAATTGTCCCCCAG-GT  198
      ||||||||||||||||||||| ||||||||||||||||||||||||| ||
seq2  TGTGTGTATATAGGGACCAGAAGAAAACCTCAGAAATTGTCCCCCAGAGT  200

seq1  GCC-ATTCATCATATTTTGAGACAGGGTCTCATACTGGACTGAGGCTGAC  247
      ||| || |||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAATACATCATATTTTGAGACAGGGTCTCATACTGGACTGAGGCTGAC  250

seq1  TGATTAGGCTAAACTGGCTGGCCATGGAGAGCCTATGAATCCTCCTATTT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTAGGCTAAACTGGCTGGCCATGGAGAGCCTATGAATCCTCCTATTT  300

seq1  CCTGATTGTAGGTGTTACAAATGGATATTACCATCCTGGCTGTTTCAATT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATTGTAGGTGTTACAAATGGATATTACCATCCTGGCTGTTTCAATT  350

seq1  TTACCAATAAGTGCTGAGAACTGAGCTCTGATTTTCATGCTTGCAAAGGA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCAATAAGTGCTGAGAACTGAGCTCTGATTTTCATGCTTGCAAAGGA  400

seq1  ATCTCTTTCCCAATAGAACCATACCCTATCCTTTGTCTTCTTAAAGGTCC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTTTCCCAATAGAACCATACCCTATCCTTTGTCTTCTTAAAGGTCC  450

seq1  TATCTTTATGACCACTCAGAGCCTCAAGCATTGAGAGTTAGAGACTGACC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTTATGACCACTCAGAGCCTCAAGCATTGAGAGTTAGAGACTGACC  500

seq1  ATGCAAACTCTGGGAGCAGAGTCATCCAGACAAAGGGGTTTTCGCACAGG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAAACTCTGGGAGCAGAGTCATCCAGACAAAGGGGTTTTCGCACAGG  550

seq1  CAGAGTGCACGTGCCCAGGGCAACTCTCTTAAACACATGCCTGGAAAATA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTGCACGTGCCCAGGGCAACTCTCTTAAACACATGCCTGGAAAATA  600

seq1  CAACGGAGAAATTGACTTGCCCATATTTCTCTGGACCATCTTCTTTAGAT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACGGAGAAATTGACTTGCCCATATTTCTCTGGACCATCTTCTTTAGAT  650

seq1  CGCTGAGTCAAATGATCAAATGAGAGCCCACTTCCCAGGCCACCCCTTCC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTGAGTCAAATGATCAAATGAGAGCCCACTTCCCAGGCCACCCCTTCC  700

seq1  TCTGAAGCTACAGCTTGCCTTCCATTCAGATGTTCCTCTCTGCACCACAC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAGCTACAGCTTGCCTTCCATTCAGATGTTCCTCTCTGCACCACAC  750

seq1  TGCTTTTCTCCAGGGCCTTGGGAAGTGGGAAGTCCTCCTGCATACTTCTG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTCTCCAGGGCCTTGGGAAGTGGGAAGTCCTCCTGCATACTTCTG  800

seq1  GCAGGTAGAGTAAAGGCATCTGCTTCCTCTCTGGGTATGTTAAGGTAACA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGTAGAGTAAAGGCATCTGCTTCCTCTCTGGGTATGTTAAGGTAACA  850

seq1  TCATTTTTTTTTTCTTCAGATTCCCAGGCCCCATAAGGCCAAGGCTGCTG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTTTTTTTCTTCAGATTCCCAGGCCCCATAAGGCCAAGGCTGCTG  900

seq1  GATGAAACACGGGTGTCTTCGCATCAGTAGGAGATTAGTTTTTTTTTTTT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAAACACGGGTGTCTTCGCATCAGTAGGAGATTAGTTTTTTTTTTTT  950

seq1  TCTTTGTCTCACTCCCTGCATCTTTGGATTTTCATTTTTGCTCTTCTCCA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGTCTCACTCCCTGCATCTTTGGATTTTCATTTTTGCTCTTCTCCA  1000

seq1  TGTTTGACTCTCAAAAGCTCATTGGTGTTTGTGCTTTGGAATTC  1041
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGACTCTCAAAAGCTCATTGGTGTTTGTGCTTTGGAATTC  1044

seq1: chr12_26358194_26359212
seq2: B6Ng01-053O24.g_67_1075

seq1  GAATTCCTCAGACCCCTTTCCTTGGGCACTGCACTTTTCCATTTTATTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCAGACCCCTTTCCTTGGGCACTGCACTTTTCCATTTTATTGC  50

seq1  TACTGACTTCTTTGATTATTTCTAGGCTAGCCTTCCTGAAGACCATCCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGACTTCTTTGATTATTTCTAGGCTAGCCTTCCTGAAGACCATCCTA  100

seq1  TGGTACATAGAGAGTTGAGATGGGAAACATCTATATACCATCTTATGGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTACATAGAGAGTTGAGATGGGAAACATCTATATACCATCTTATGGTA  150

seq1  CATAGAGAGTTATACTTTGCATTCTGGGAAAAGAGGATTTAACGTGGCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGAGAGTTATACTTTGCATTCTGGGAAAAGAGGATTTAACGTGGCAA  200

seq1  TGAGATCCTCTGGGAGAAGATCAAAGGATATCTGCTGGCAAATACTAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATCCTCTGGGAGAAGATCAAAGGATATCTGCTGGCAAATACTAGAT  250

seq1  CCGGAGACCTTGGCCAGAGAGAGGACATGGAACACAGAACTGTTCCCGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGAGACCTTGGCCAGAGAGAGGACATGGAACACAGAACTGTTCCCGGA  300

seq1  GGCTTCCTAGGAAGCCTTAGGGATGCTCCAGTGTCTAAGAAAGCAGCTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTCCTAGGAAGCCTTAGGGATGCTCCAGTGTCTAAGAAAGCAGCTTG  350

seq1  TAGGAGTGGCCCTGGTACTTATGAGAAGCCTTAGGGAGCCCACGTGGACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGTGGCCCTGGTACTTATGAGAAGCCTTAGGGAGCCCACGTGGACT  400

seq1  CTAGGGACTGGCTGCTGACTGAAGATAAACCAGTAACTTCTTTCTCTCGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGGACTGGCTGCTGACTGAAGATAAACCAGTAACTTCTTTCTCTCGT  450

seq1  CTGCTTCTAGAGCCACCAGGATTTCTCCTTTGGGGAAACCCTAGGGGTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTCTAGAGCCACCAGGATTTCTCCTTTGGGGAAACCCTAGGGGTAC  500

seq1  CCAAGAATGCCATTCTCCTCAGCATCCTTTTCCTGCATGGGAAGGGGTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGAATGCCATTCTCCTCAGCATCCTTTTCCTGCATGGGAAGGGGTGA  550

seq1  AGACAAGCATCAGCTACCTGTCACCCATCCCCTTTGCTCTGCCTCACACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAGCATCAGCTACCTGTCACCCATCCCCTTTGCTCTGCCTCACACA  600

seq1  CAAAACAACTCCTGTCACTTCTGGACCTCACTTCAGGACACCTTCAGTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACAACTCCTGTCACTTCTGGACCTCACTTCAGGACACCTTCAGTGT  650

seq1  CACAGGCTTACCTTACACTTCCTAAAGAGCCAGTCTGGACCTTGTCTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGCTTACCTTACACTTCCTAAAGAGCCAGTCTGGACCTTGTCTTTT  700

seq1  GTAGTGAGGCCCTCATGATGCTTTGATGCTTCCCTCATTGATCGTATTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTGAGGCCCTCATGATGCTTTGATGCTTCCCTCATTGATCGTATTAT  750

seq1  GATTTGTGAATATTAATTTGTTGATTTGATTTTTTATGGGTCTTTATACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGTGAATATTAATTTGTTGATTTGATTTTTTATGGGTCTTTATACT  800

seq1  ACGGGACAGGTATTCAGCTTGCTTTTTCTACTATTTATCTAATTTCTAGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGGACAGGTATTCAGCTTGCTTTTTCTACTATTTATCTAATTTCTAGC  850

seq1  ACGCCTGAATAAATTCTTTTTTTTTCTTTAATATTTTTTATTACGTATTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCCTGAATAAATTCTTTTTTTTTCTTTAATATTTTTTATTACGTATTT  900

seq1  TCCTCAATTACATTTTCAATGCTATCCCCAAAAGTCCCCCATACCCTCCC  950
      ||||||  ||||||||| |||||||||| |||||| ||||||| ||||||
seq2  TCCTCA--TACATTTTC-ATGCTATCCCAAAAAGT-CCCCATA-CCTCCC  945

seq1  CCCACTCCCCTACCCACCCATTCCCATTTTTTGGCCCTGGCATTCCCCTG  1000
      |   |  ||||| |||||||||||||||||||||||||||| ||||||||
seq2  C---CATCCCTA-CCACCCATTCCCATTTTTTGGCCCTGGC-TTCCCCTG  990

seq1  TACTGGGGCATATAAAGTT  1019
      ||  |||||||||||||||
seq2  TATGGGGGCATATAAAGTT  1009